RNA–Protein interactions for RNA: ENST00000480744.2

LIMS3-203, Transcript of LIM zinc finger domain containing 3, humanhuman

APPRIS P1 TSL 5 BASIC

Gene LIMS3, Length 1,197 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS3-203ENST00000480744 ADGRE4PQ86SQ3 457 aa13.81□□□□□ -0.2
LIMS3-203ENST00000480744 EIF1ADQ8N9N8 165 aaKnown RBP13.81□□□□□ -0.2
LIMS3-203ENST00000480744 CCDC63Q8NA47 563 aa13.81□□□□□ -0.2
LIMS3-203ENST00000480744 MZB1Q8WU39 189 aa13.81□□□□□ -0.2
LIMS3-203ENST00000480744 C11orf24Q96F05 449 aaPredicted RBP13.81□□□□□ -0.2
LIMS3-203ENST00000480744 TMUB1Q9BVT8 246 aa13.81□□□□□ -0.2
LIMS3-203ENST00000480744 DSN1Q9H410 356 aa13.81□□□□□ -0.2
LIMS3-203ENST00000480744 MYNNQ9NPC7 610 aa13.81□□□□□ -0.2
LIMS3-203ENST00000480744 DDX18Q9NVP1 670 aaKnown RBP13.81□□□□□ -0.2
LIMS3-203ENST00000480744 SIRT5Q9NXA8 310 aa13.81□□□□□ -0.2
LIMS3-203ENST00000480744 A0A087WV62 115 aa13.8□□□□□ -0.2
LIMS3-203ENST00000480744 SMIM23A6NLE4 172 aa13.8□□□□□ -0.2
LIMS3-203ENST00000480744 B4DXG7 233 aa13.8□□□□□ -0.2
LIMS3-203ENST00000480744 ZIC3O60481 467 aa13.8□□□□□ -0.2
LIMS3-203ENST00000480744 TGM6O95932 706 aa13.8□□□□□ -0.2
LIMS3-203ENST00000480744 RAF1P04049 648 aa13.8□□□□□ -0.2
LIMS3-203ENST00000480744 PROCP04070 461 aa13.8□□□□□ -0.2
LIMS3-203ENST00000480744 HK1P19367 917 aa13.8□□□□□ -0.2
LIMS3-203ENST00000480744 KLK2P20151 261 aa13.8□□□□□ -0.2
LIMS3-203ENST00000480744 CHMP24386 653 aa13.8□□□□□ -0.2
LIMS3-203ENST00000480744 DIO3P55073 304 aa13.8□□□□□ -0.2
LIMS3-203ENST00000480744 DSCR4P56555 118 aaPredicted RBP13.8□□□□□ -0.2
LIMS3-203ENST00000480744 GAB1Q13480 694 aa13.8□□□□□ -0.2
LIMS3-203ENST00000480744 KEAP1Q14145 624 aa13.8□□□□□ -0.2
LIMS3-203ENST00000480744 ZNHIT3Q15649 155 aaPredicted RBP13.8□□□□□ -0.2
LIMS3-203ENST00000480744 DECR1Q16698 335 aa13.8□□□□□ -0.2
LIMS3-203ENST00000480744 FAM71E1Q6IPT2 247 aa13.8□□□□□ -0.2
LIMS3-203ENST00000480744 FRMD7Q6ZUT3 714 aa13.8□□□□□ -0.2
LIMS3-203ENST00000480744 UCN2Q96RP3 112 aa13.8□□□□□ -0.2
LIMS3-203ENST00000480744 PIGMQ9H3S5 423 aa13.8□□□□□ -0.2
LIMS3-203ENST00000480744 GLIPR2Q9H4G4 154 aa13.8□□□□□ -0.2
LIMS3-203ENST00000480744 Q9N2J8 555 aa13.8□□□□□ -0.2
LIMS3-203ENST00000480744 RRAGDQ9NQL2 400 aaPredicted RBP13.8□□□□□ -0.2
LIMS3-203ENST00000480744 FLRT3Q9NZU0 649 aa13.8□□□□□ -0.2
LIMS3-203ENST00000480744 MED11Q9P086 117 aa13.8□□□□□ -0.2
LIMS3-203ENST00000480744 PACSIN3Q9UKS6 424 aa13.8□□□□□ -0.2
LIMS3-203ENST00000480744 GRID1Q9ULK0 1009 aa13.8□□□□□ -0.2
LIMS3-203ENST00000480744 C19orf53Q9UNZ5 99 aaPredicted RBP13.8□□□□□ -0.2
LIMS3-203ENST00000480744 MRPS18CQ9Y3D5 142 aaKnown RBP13.8□□□□□ -0.2
LIMS3-203ENST00000480744 A0A1W2PNV4 684 aa13.79□□□□□ -0.2
LIMS3-203ENST00000480744 SH3D21A4FU49 640 aa13.79□□□□□ -0.2
LIMS3-203ENST00000480744 UPK1AO00322 258 aa13.79□□□□□ -0.2
LIMS3-203ENST00000480744 SMNDC1O75940 238 aaKnown RBP eCLIP13.79□□□□□ -0.2
LIMS3-203ENST00000480744 RSL1D1O76021 490 aaKnown RBP13.79□□□□□ -0.2
LIMS3-203ENST00000480744 SLITRK5O94991 958 aa13.79□□□□□ -0.2
LIMS3-203ENST00000480744 PEPDP12955 493 aa13.79□□□□□ -0.2
LIMS3-203ENST00000480744 B3GALT5-AS1P59052 145 aa13.79□□□□□ -0.2
LIMS3-203ENST00000480744 NAA20P61599 178 aa13.79□□□□□ -0.2
LIMS3-203ENST00000480744 CYP27C1Q4G0S4 372 aa13.79□□□□□ -0.2
LIMS3-203ENST00000480744 NOXRED1Q6NXP6 359 aa13.79□□□□□ -0.2
LIMS3-203ENST00000480744 MEIOBQ8N635 442 aa13.79□□□□□ -0.2
LIMS3-203ENST00000480744 CNEP1R1Q8N9A8 125 aa13.79□□□□□ -0.2
LIMS3-203ENST00000480744 OR2M3Q8NG83 312 aa13.79□□□□□ -0.2
LIMS3-203ENST00000480744 OR5M1Q8NGP8 315 aa13.79□□□□□ -0.2
LIMS3-203ENST00000480744 RNF138Q8WVD3 245 aa13.79□□□□□ -0.2
LIMS3-203ENST00000480744 UBLCP1Q8WVY7 318 aaPredicted RBP13.79□□□□□ -0.2
LIMS3-203ENST00000480744 AMDHD1Q96NU7 426 aa13.79□□□□□ -0.2
LIMS3-203ENST00000480744 ALPK1Q96QP1 1244 aa13.79□□□□□ -0.2
LIMS3-203ENST00000480744 C12orf65Q9H3J6 166 aaKnown RBP13.79□□□□□ -0.2
LIMS3-203ENST00000480744 TNFRSF12AQ9NP84 129 aa13.79□□□□□ -0.2
LIMS3-203ENST00000480744 SDHAF3Q9NRP4 125 aa13.79□□□□□ -0.2
LIMS3-203ENST00000480744 ZFHX3Q15911 3703 aa13.79□□□□□ -0.2
LIMS3-203ENST00000480744 ACANP16112 2415 aa13.79□□□□□ -0.2
LIMS3-203ENST00000480744 SLC22A20A6NK97 555 aa13.78□□□□□ -0.2
LIMS3-203ENST00000480744 H3BQF6 201 aa13.78□□□□□ -0.2
LIMS3-203ENST00000480744 CASKO14936 926 aa13.78□□□□□ -0.2
LIMS3-203ENST00000480744 SEC14L5O43304 696 aa13.78□□□□□ -0.2
LIMS3-203ENST00000480744 HCRTR2O43614 444 aa13.78□□□□□ -0.2
LIMS3-203ENST00000480744 GMFGO60234 142 aa13.78□□□□□ -0.2
LIMS3-203ENST00000480744 FADS1O60427 444 aa13.78□□□□□ -0.2
LIMS3-203ENST00000480744 PLIN3O60664 434 aa13.78□□□□□ -0.2
LIMS3-203ENST00000480744 SEC22BO75396 215 aa13.78□□□□□ -0.2
LIMS3-203ENST00000480744 SHBGP04278 402 aa13.78□□□□□ -0.2
LIMS3-203ENST00000480744 GPC1P35052 558 aa13.78□□□□□ -0.2
LIMS3-203ENST00000480744 CLK3P49761 638 aaKnown RBP13.78□□□□□ -0.2
LIMS3-203ENST00000480744 EEF1A1P68104 462 aaKnown RBP13.78□□□□□ -0.2
LIMS3-203ENST00000480744 SIRPAP78324 504 aa13.78□□□□□ -0.2
LIMS3-203ENST00000480744 FOXD4Q12950 439 aaPredicted RBP13.78□□□□□ -0.2
LIMS3-203ENST00000480744 HSPB3Q12988 150 aa13.78□□□□□ -0.2
LIMS3-203ENST00000480744 CCDC153Q494R4 210 aa13.78□□□□□ -0.2
LIMS3-203ENST00000480744 EEF1A1P5Q5VTE0 462 aa13.78□□□□□ -0.2
LIMS3-203ENST00000480744 CLEC6AQ6EIG7 209 aa13.78□□□□□ -0.2
LIMS3-203ENST00000480744 ANKRD26P1Q6NSI1 321 aa13.78□□□□□ -0.2
LIMS3-203ENST00000480744 IKBIPQ70UQ0 350 aa13.78□□□□□ -0.2
LIMS3-203ENST00000480744 TRIM46Q7Z4K8 759 aa13.78□□□□□ -0.2
LIMS3-203ENST00000480744 CAMKMTQ7Z624 323 aa13.78□□□□□ -0.2
LIMS3-203ENST00000480744 MARCH3Q86UD3 253 aa13.78□□□□□ -0.2
LIMS3-203ENST00000480744 CNPY4Q8N129 248 aa13.78□□□□□ -0.2
LIMS3-203ENST00000480744 OR2L13Q8N349 312 aa13.78□□□□□ -0.2
LIMS3-203ENST00000480744 FADS6Q8N9I5 356 aa13.78□□□□□ -0.2
LIMS3-203ENST00000480744 FAM76AQ8TAV0 307 aa13.78□□□□□ -0.2
LIMS3-203ENST00000480744 PUM2Q8TB72 1066 aaKnown RBP eCLIP13.78□□□□□ -0.2
LIMS3-203ENST00000480744 SMPDL3BQ92485 455 aa13.78□□□□□ -0.2
LIMS3-203ENST00000480744 GFM2Q969S9 779 aaKnown RBP13.78□□□□□ -0.2
LIMS3-203ENST00000480744 ELP4Q96EB1 424 aa13.78□□□□□ -0.2
LIMS3-203ENST00000480744 DACH2Q96NX9 599 aa13.78□□□□□ -0.2
LIMS3-203ENST00000480744 PTGES2Q9H7Z7 377 aa13.78□□□□□ -0.2
LIMS3-203ENST00000480744 EQTNQ9NQ60 294 aa13.78□□□□□ -0.2
LIMS3-203ENST00000480744 FAM120CQ9NX05 1096 aaKnown RBP13.78□□□□□ -0.2
LIMS3-203ENST00000480744 TAS2R7Q9NYW3 318 aa13.78□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms