RNA–Protein interactions for RNA: ENST00000480658.5

CCM2-213, Transcript of CCM2 scaffold protein, humanhuman

TSL 2

Gene CCM2, Length 1,136 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-213ENST00000480658 RNF138Q8WVD3 245 aa10.42□□□□□ -0.74
CCM2-213ENST00000480658 CAVIN3Q969G5 261 aa10.42□□□□□ -0.74
CCM2-213ENST00000480658 MOAP1Q96BY2 351 aa10.42□□□□□ -0.74
CCM2-213ENST00000480658 WDYHV1Q96HA8 205 aa10.42□□□□□ -0.74
CCM2-213ENST00000480658 FCRL1Q96LA6 429 aa10.42□□□□□ -0.74
CCM2-213ENST00000480658 PIGQQ9BRB3 760 aa10.42□□□□□ -0.74
CCM2-213ENST00000480658 G6PC3Q9BUM1 346 aa10.42□□□□□ -0.74
CCM2-213ENST00000480658 TBL1XR1Q9BZK7 514 aa10.42□□□□□ -0.74
CCM2-213ENST00000480658 REEP4Q9H6H4 257 aa10.42□□□□□ -0.74
CCM2-213ENST00000480658 SERHLQ9NQF3 203 aa10.42□□□□□ -0.74
CCM2-213ENST00000480658 PAQR5Q9NXK6 330 aaPredicted RBP10.42□□□□□ -0.74
CCM2-213ENST00000480658 L3MBTL1Q9Y468 752 aa10.42□□□□□ -0.74
CCM2-213ENST00000480658 LRBAP50851 2863 aa10.42□□□□□ -0.74
CCM2-213ENST00000480658 APCP25054 2843 aa10.42□□□□□ -0.74
CCM2-213ENST00000480658 GTF3C1Q12789 2109 aa10.42□□□□□ -0.74
CCM2-213ENST00000480658 EXPH5Q8NEV8 1989 aa10.41□□□□□ -0.74
CCM2-213ENST00000480658 A0A087WZY1 265 aa10.41□□□□□ -0.74
CCM2-213ENST00000480658 TLDC2A0PJX2 215 aa10.41□□□□□ -0.74
CCM2-213ENST00000480658 UPK1AO00322 258 aa10.41□□□□□ -0.74
CCM2-213ENST00000480658 NGFRP08138 427 aa10.41□□□□□ -0.74
CCM2-213ENST00000480658 TMIGD3P0DMS9 266 aaPredicted RBP10.41□□□□□ -0.74
CCM2-213ENST00000480658 HPGDP15428 266 aa10.41□□□□□ -0.74
CCM2-213ENST00000480658 ZNF17P17021 662 aa10.41□□□□□ -0.74
CCM2-213ENST00000480658 DPP4P27487 766 aa10.41□□□□□ -0.74
CCM2-213ENST00000480658 UQCRC1P31930 480 aa10.41□□□□□ -0.74
CCM2-213ENST00000480658 PTGDSP41222 190 aa10.41□□□□□ -0.74
CCM2-213ENST00000480658 PRIM2P49643 509 aa10.41□□□□□ -0.74
CCM2-213ENST00000480658 MANFP55145 182 aaKnown RBP10.41□□□□□ -0.74
CCM2-213ENST00000480658 RPS3AP61247 264 aaKnown RBP10.41□□□□□ -0.74
CCM2-213ENST00000480658 RPL38P63173 70 aaKnown RBP10.41□□□□□ -0.74
CCM2-213ENST00000480658 DUSP2Q05923 314 aa10.41□□□□□ -0.74
CCM2-213ENST00000480658 C17orf67Q0P5P2 114 aa10.41□□□□□ -0.74
CCM2-213ENST00000480658 PDE7AQ13946 482 aa10.41□□□□□ -0.74
CCM2-213ENST00000480658 KIAA0040Q15053 153 aa10.41□□□□□ -0.74
CCM2-213ENST00000480658 EIPR1Q53HC9 387 aa10.41□□□□□ -0.74
CCM2-213ENST00000480658 CLEC6AQ6EIG7 209 aa10.41□□□□□ -0.74
CCM2-213ENST00000480658 FAM180BQ6P0A1 224 aa10.41□□□□□ -0.74
CCM2-213ENST00000480658 NPSR1Q6W5P4 371 aa10.41□□□□□ -0.74
CCM2-213ENST00000480658 OR6Y1Q8NGX8 325 aa10.41□□□□□ -0.74
CCM2-213ENST00000480658 TWIST2Q8WVJ9 160 aa10.41□□□□□ -0.74
CCM2-213ENST00000480658 GFM2Q969S9 779 aaKnown RBP10.41□□□□□ -0.74
CCM2-213ENST00000480658 TMEM109Q9BVC6 243 aa10.41□□□□□ -0.74
CCM2-213ENST00000480658 GLIPR2Q9H4G4 154 aa10.41□□□□□ -0.74
CCM2-213ENST00000480658 ANKZF1Q9H8Y5 726 aa10.41□□□□□ -0.74
CCM2-213ENST00000480658 FANCFQ9NPI8 374 aa10.41□□□□□ -0.74
CCM2-213ENST00000480658 GIN1Q9NXP7 522 aa10.41□□□□□ -0.74
CCM2-213ENST00000480658 NTMQ9P121 344 aa10.41□□□□□ -0.74
CCM2-213ENST00000480658 SLC6A5Q9Y345 797 aa10.41□□□□□ -0.74
CCM2-213ENST00000480658 TRAF6Q9Y4K3 522 aa10.41□□□□□ -0.74
CCM2-213ENST00000480658 CCL27Q9Y4X3 112 aa10.41□□□□□ -0.74
CCM2-213ENST00000480658 DNAJC15Q9Y5T4 150 aa10.41□□□□□ -0.74
CCM2-213ENST00000480658 TUBAL3A6NHL2 446 aa10.4□□□□□ -0.74
CCM2-213ENST00000480658 LSM1O15116 133 aaKnown RBP10.4□□□□□ -0.74
CCM2-213ENST00000480658 RCBTB2O95199 551 aa10.4□□□□□ -0.74
CCM2-213ENST00000480658 SLU7O95391 586 aaKnown RBP10.4□□□□□ -0.74
CCM2-213ENST00000480658 MYZAPP0CAP1 466 aa10.4□□□□□ -0.74
CCM2-213ENST00000480658 ZNF708P17019 499 aa10.4□□□□□ -0.74
CCM2-213ENST00000480658 SDC1P18827 310 aa10.4□□□□□ -0.74
CCM2-213ENST00000480658 POU3F2P20265 443 aaPredicted RBP10.4□□□□□ -0.74
CCM2-213ENST00000480658 SOX18P35713 384 aa10.4□□□□□ -0.74
CCM2-213ENST00000480658 FRKP42685 505 aaPredicted RBP10.4□□□□□ -0.74
CCM2-213ENST00000480658 HSPB3Q12988 150 aa10.4□□□□□ -0.74
CCM2-213ENST00000480658 CPEB4Q17RY0 729 aaKnown RBP eCLIP10.4□□□□□ -0.74
CCM2-213ENST00000480658 SMU1Q2TAY7 513 aa10.4□□□□□ -0.74
CCM2-213ENST00000480658 LSM12Q3MHD2 195 aaKnown RBP10.4□□□□□ -0.74
CCM2-213ENST00000480658 SH2D4BQ5SQS7 431 aa10.4□□□□□ -0.74
CCM2-213ENST00000480658 SPNS3Q6ZMD2 512 aa10.4□□□□□ -0.74
CCM2-213ENST00000480658 YRDCQ86U90 279 aaKnown RBP10.4□□□□□ -0.74
CCM2-213ENST00000480658 GRAMD2AQ8IUY3 354 aa10.4□□□□□ -0.74
CCM2-213ENST00000480658 TRIM42Q8IWZ5 723 aa10.4□□□□□ -0.74
CCM2-213ENST00000480658 LRRC34Q8IZ02 419 aa10.4□□□□□ -0.74
CCM2-213ENST00000480658 MREGQ8N565 214 aa10.4□□□□□ -0.74
CCM2-213ENST00000480658 FADS6Q8N9I5 356 aa10.4□□□□□ -0.74
CCM2-213ENST00000480658 ZNF527Q8NB42 609 aa10.4□□□□□ -0.74
CCM2-213ENST00000480658 TNIP2Q8NFZ5 429 aa10.4□□□□□ -0.74
CCM2-213ENST00000480658 PPP1R14CQ8TAE6 165 aa10.4□□□□□ -0.74
CCM2-213ENST00000480658 EFHD2Q96C19 240 aaPredicted RBP10.4□□□□□ -0.74
CCM2-213ENST00000480658 RMND5BQ96G75 393 aaPredicted RBP10.4□□□□□ -0.74
CCM2-213ENST00000480658 FAM111AQ96PZ2 611 aa10.4□□□□□ -0.74
CCM2-213ENST00000480658 STACQ99469 402 aa10.4□□□□□ -0.74
CCM2-213ENST00000480658 SH3GL2Q99962 352 aa10.4□□□□□ -0.74
CCM2-213ENST00000480658 GATA5Q9BWX5 397 aaPredicted RBP10.4□□□□□ -0.74
CCM2-213ENST00000480658 SSU72Q9NP77 194 aaKnown RBP10.4□□□□□ -0.74
CCM2-213ENST00000480658 SH3BP4Q9P0V3 963 aa10.4□□□□□ -0.74
CCM2-213ENST00000480658 EIF3LQ9Y262 564 aaKnown RBP10.4□□□□□ -0.74
CCM2-213ENST00000480658 CSMD1Q96PZ7 3565 aa10.4□□□□□ -0.74
CCM2-213ENST00000480658 CACNA1CQ13936 2221 aa10.39□□□□□ -0.75
CCM2-213ENST00000480658 IGLV3-32A0A0A0MS00 114 aa10.39□□□□□ -0.75
CCM2-213ENST00000480658 EEF1E1-BLOC1S5C9J1V9 151 aa10.39□□□□□ -0.75
CCM2-213ENST00000480658 H3BNH8 94 aa10.39□□□□□ -0.75
CCM2-213ENST00000480658 TM9SF1O15321 606 aa10.39□□□□□ -0.75
CCM2-213ENST00000480658 EEF1E1O43324 174 aaKnown RBP10.39□□□□□ -0.75
CCM2-213ENST00000480658 EMC8O43402 210 aa10.39□□□□□ -0.75
CCM2-213ENST00000480658 PRPS1L1P21108 318 aa10.39□□□□□ -0.75
CCM2-213ENST00000480658 ALDH3A1P30838 453 aa10.39□□□□□ -0.75
CCM2-213ENST00000480658 CPA2P48052 419 aa10.39□□□□□ -0.75
CCM2-213ENST00000480658 LHX2P50458 406 aa10.39□□□□□ -0.75
CCM2-213ENST00000480658 ZNF136P52737 540 aa10.39□□□□□ -0.75
CCM2-213ENST00000480658 VSNL1P62760 191 aa10.39□□□□□ -0.75
CCM2-213ENST00000480658 GALNTL6Q49A17 601 aa10.39□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms