RNA–Protein interactions for RNA: ENST00000480468.1

SIK3-210, Transcript of SIK family kinase 3, humanhuman

TSL 1 (best)

Gene SIK3, Length 2,237 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIK3-210ENST00000480468 HTR4Q13639 388 aa10.02□□□□□ -0.81
SIK3-210ENST00000480468 DDX39BQ13838 428 aaKnown RBP10.02□□□□□ -0.81
SIK3-210ENST00000480468 DOC2AQ14183 400 aa10.02□□□□□ -0.81
SIK3-210ENST00000480468 SF1Q15637 639 aaKnown RBP10.02□□□□□ -0.81
SIK3-210ENST00000480468 ZSWIM7Q19AV6 140 aa10.02□□□□□ -0.81
SIK3-210ENST00000480468 C10orf120Q5SQS8 335 aa10.02□□□□□ -0.81
SIK3-210ENST00000480468 ATXN7L2Q5T6C5 722 aaPredicted RBP10.02□□□□□ -0.81
SIK3-210ENST00000480468 PODNL1Q6PEZ8 512 aa10.02□□□□□ -0.81
SIK3-210ENST00000480468 ZNF322Q6U7Q0 402 aaPredicted RBP10.02□□□□□ -0.81
SIK3-210ENST00000480468 ALKAL2Q6UX46 152 aa10.02□□□□□ -0.81
SIK3-210ENST00000480468 DEF8Q6ZN54 512 aa10.02□□□□□ -0.81
SIK3-210ENST00000480468 Q6ZTK2 550 aa10.02□□□□□ -0.81
SIK3-210ENST00000480468 RAB11FIP2Q7L804 512 aa10.02□□□□□ -0.81
SIK3-210ENST00000480468 ZNF467Q7Z7K2 595 aaPredicted RBP10.02□□□□□ -0.81
SIK3-210ENST00000480468 CFAP52Q8N1V2 620 aa10.02□□□□□ -0.81
SIK3-210ENST00000480468 HORMAD2Q8N7B1 307 aa10.02□□□□□ -0.81
SIK3-210ENST00000480468 KLHDC9Q8NEP7 349 aa10.02□□□□□ -0.81
SIK3-210ENST00000480468 OR11G2Q8NGC1 345 aa10.02□□□□□ -0.81
SIK3-210ENST00000480468 TRMT10AQ8TBZ6 339 aaKnown RBP10.02□□□□□ -0.81
SIK3-210ENST00000480468 SP7Q8TDD2 431 aaPredicted RBP10.02□□□□□ -0.81
SIK3-210ENST00000480468 UPF1Q92900 1129 aaKnown RBP eCLIP10.02□□□□□ -0.81
SIK3-210ENST00000480468 ORAI1Q96D31 301 aa10.02□□□□□ -0.81
SIK3-210ENST00000480468 SEC22CQ9BRL7 303 aa10.02□□□□□ -0.81
SIK3-210ENST00000480468 SLC25A32Q9H2D1 315 aa10.02□□□□□ -0.81
SIK3-210ENST00000480468 MTG2Q9H4K7 406 aa10.02□□□□□ -0.81
SIK3-210ENST00000480468 ESRP2Q9H6T0 727 aaKnown RBP10.02□□□□□ -0.81
SIK3-210ENST00000480468 GAREM1Q9H706 876 aa10.02□□□□□ -0.81
SIK3-210ENST00000480468 MED11Q9P086 117 aa10.02□□□□□ -0.81
SIK3-210ENST00000480468 MGAT4CQ9UBM8 478 aa10.02□□□□□ -0.81
SIK3-210ENST00000480468 CTSFQ9UBX1 484 aa10.02□□□□□ -0.81
SIK3-210ENST00000480468 MLXQ9UH92 298 aa10.02□□□□□ -0.81
SIK3-210ENST00000480468 AFF4Q9UHB7 1163 aaKnown RBP10.02□□□□□ -0.81
SIK3-210ENST00000480468 FBXL3Q9UKT7 428 aa10.02□□□□□ -0.81
SIK3-210ENST00000480468 SLC9A8Q9Y2E8 581 aa10.02□□□□□ -0.81
SIK3-210ENST00000480468 PCDHB9Q9Y5E1 797 aa10.02□□□□□ -0.81
SIK3-210ENST00000480468 A0A0G2JK05 382 aa10.01□□□□□ -0.81
SIK3-210ENST00000480468 A0A0U1RQF3 1178 aa10.01□□□□□ -0.81
SIK3-210ENST00000480468 C5orf58C9J3I9 102 aa10.01□□□□□ -0.81
SIK3-210ENST00000480468 CLDN11O75508 207 aa10.01□□□□□ -0.81
SIK3-210ENST00000480468 SC5DO75845 299 aa10.01□□□□□ -0.81
SIK3-210ENST00000480468 UBXN7O94888 489 aa10.01□□□□□ -0.81
SIK3-210ENST00000480468 RASGRP1O95267 797 aa10.01□□□□□ -0.81
SIK3-210ENST00000480468 ANKRD34CP0C6C1 535 aa10.01□□□□□ -0.81
SIK3-210ENST00000480468 PSMB1P20618 241 aaKnown RBP10.01□□□□□ -0.81
SIK3-210ENST00000480468 MAPK3P27361 379 aaPredicted RBP10.01□□□□□ -0.81
SIK3-210ENST00000480468 MAPK9P45984 424 aa10.01□□□□□ -0.81
SIK3-210ENST00000480468 CDH11P55287 796 aa10.01□□□□□ -0.81
SIK3-210ENST00000480468 TWF1Q12792 350 aa10.01□□□□□ -0.81
SIK3-210ENST00000480468 DUSP4Q13115 394 aa10.01□□□□□ -0.81
SIK3-210ENST00000480468 PLD1Q13393 1074 aa10.01□□□□□ -0.81
SIK3-210ENST00000480468 TRAM1Q15629 374 aa10.01□□□□□ -0.81
SIK3-210ENST00000480468 KIAA1161Q6NSJ0 714 aa10.01□□□□□ -0.81
SIK3-210ENST00000480468 ZC3H14Q6PJT7 736 aaKnown RBP10.01□□□□□ -0.81
SIK3-210ENST00000480468 IL20RBQ6UXL0 311 aa10.01□□□□□ -0.81
SIK3-210ENST00000480468 TMUB2Q71RG4 321 aa10.01□□□□□ -0.81
SIK3-210ENST00000480468 TRMT11Q7Z4G4 463 aaKnown RBP10.01□□□□□ -0.81
SIK3-210ENST00000480468 CBARPQ8N350 705 aaPredicted RBP10.01□□□□□ -0.81
SIK3-210ENST00000480468 OR4K5Q8NGD3 323 aa10.01□□□□□ -0.81
SIK3-210ENST00000480468 OR51Q1Q8NH59 317 aa10.01□□□□□ -0.81
SIK3-210ENST00000480468 GNPDA2Q8TDQ7 276 aa10.01□□□□□ -0.81
SIK3-210ENST00000480468 SPRYD4Q8WW59 207 aaPredicted RBP10.01□□□□□ -0.81
SIK3-210ENST00000480468 PPCDCQ96CD2 204 aa10.01□□□□□ -0.81
SIK3-210ENST00000480468 ELP4Q96EB1 424 aa10.01□□□□□ -0.81
SIK3-210ENST00000480468 PAWRQ96IZ0 340 aaKnown RBP10.01□□□□□ -0.81
SIK3-210ENST00000480468 SUSD3Q96L08 255 aa10.01□□□□□ -0.81
SIK3-210ENST00000480468 C10orf90Q96M02 699 aa10.01□□□□□ -0.81
SIK3-210ENST00000480468 MVB12BQ9H7P6 319 aa10.01□□□□□ -0.81
SIK3-210ENST00000480468 ZFYVE1Q9HBF4 777 aa10.01□□□□□ -0.81
SIK3-210ENST00000480468 EQTNQ9NQ60 294 aa10.01□□□□□ -0.81
SIK3-210ENST00000480468 A4GNTQ9UNA3 340 aa10.01□□□□□ -0.81
SIK3-210ENST00000480468 CAMK2AQ9UQM7 478 aa10.01□□□□□ -0.81
SIK3-210ENST00000480468 PCDHGA9Q9Y5G4 932 aaKnown RBP10.01□□□□□ -0.81
SIK3-210ENST00000480468 NPFFR2Q9Y5X5 522 aa10.01□□□□□ -0.81
SIK3-210ENST00000480468 POM121CA8CG34 1229 aa10.01□□□□□ -0.81
SIK3-210ENST00000480468 SYN3O14994 580 aa10.01□□□□□ -0.81
SIK3-210ENST00000480468 MT-ND4P03905 459 aa10.01□□□□□ -0.81
SIK3-210ENST00000480468 WNT1P04628 370 aa10.01□□□□□ -0.81
SIK3-210ENST00000480468 HIST1H2ABP04908 130 aa10.01□□□□□ -0.81
SIK3-210ENST00000480468 UQCRC2P22695 453 aa10.01□□□□□ -0.81
SIK3-210ENST00000480468 CCR7P32248 378 aa10.01□□□□□ -0.81
SIK3-210ENST00000480468 PNLIPRP1P54315 467 aa10.01□□□□□ -0.81
SIK3-210ENST00000480468 MICBQ29980 383 aa10.01□□□□□ -0.81
SIK3-210ENST00000480468 FAM209BQ5JX69 171 aa10.01□□□□□ -0.81
SIK3-210ENST00000480468 SFRP5Q5T4F7 317 aa10.01□□□□□ -0.81
SIK3-210ENST00000480468 AADACL4Q5VUY2 407 aa10.01□□□□□ -0.81
SIK3-210ENST00000480468 GSG1LQ6UXU4 331 aa10.01□□□□□ -0.81
SIK3-210ENST00000480468 GLDNQ6ZMI3 551 aaPredicted RBP10.01□□□□□ -0.81
SIK3-210ENST00000480468 HIST3H2AQ7L7L0 130 aa10.01□□□□□ -0.81
SIK3-210ENST00000480468 SLC9B2Q86UD5 537 aa10.01□□□□□ -0.81
SIK3-210ENST00000480468 TSPAN33Q86UF1 283 aa10.01□□□□□ -0.81
SIK3-210ENST00000480468 KLHDC8AQ8IYD2 350 aa10.01□□□□□ -0.81
SIK3-210ENST00000480468 TMIEQ8NEW7 156 aa10.01□□□□□ -0.81
SIK3-210ENST00000480468 TEX47Q8TBZ9 253 aa10.01□□□□□ -0.81
SIK3-210ENST00000480468 SMIM4Q8WVI0 70 aa10.01□□□□□ -0.81
SIK3-210ENST00000480468 CLP1Q92989 425 aaKnown RBP10.01□□□□□ -0.81
SIK3-210ENST00000480468 HIST1H2ACQ93077 130 aa10.01□□□□□ -0.81
SIK3-210ENST00000480468 UTP23Q9BRU9 249 aaKnown RBP10.01□□□□□ -0.81
SIK3-210ENST00000480468 SMG9Q9H0W8 520 aaKnown RBP10.01□□□□□ -0.81
SIK3-210ENST00000480468 PLEKHA1Q9HB21 404 aa10.01□□□□□ -0.81
SIK3-210ENST00000480468 SGK2Q9HBY8 427 aa10.01□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms