RNA–Protein interactions for RNA: ENST00000478582.5

CCM2-211, Transcript of CCM2 scaffold protein, humanhuman

TSL 3

Gene CCM2, Length 937 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-211ENST00000478582 FBXO30Q8TB52 745 aa24.57■■□□□ 1.52
CCM2-211ENST00000478582 ADAMTS15Q8TE58 950 aa24.57■■□□□ 1.52
CCM2-211ENST00000478582 JADE3Q92613 823 aa24.57■■□□□ 1.52
CCM2-211ENST00000478582 TMCO6Q96DC7 493 aa24.57■■□□□ 1.52
CCM2-211ENST00000478582 SLC35G5Q96KT7 338 aa24.57■■□□□ 1.52
CCM2-211ENST00000478582 BTBD2Q9BX70 525 aa24.57■■□□□ 1.52
CCM2-211ENST00000478582 ANGPTL4Q9BY76 406 aa24.57■■□□□ 1.52
CCM2-211ENST00000478582 PCDHGB3Q9Y5G1 929 aa24.57■■□□□ 1.52
CCM2-211ENST00000478582 NUP214P35658 2090 aaPredicted RBP24.57■■□□□ 1.52
CCM2-211ENST00000478582 DUXAA6NLW8 204 aa24.56■■□□□ 1.52
CCM2-211ENST00000478582 SNX3O60493 162 aa24.56■■□□□ 1.52
CCM2-211ENST00000478582 AGFG2O95081 481 aa24.56■■□□□ 1.52
CCM2-211ENST00000478582 GSNP06396 782 aa24.56■■□□□ 1.52
CCM2-211ENST00000478582 ADSLP30566 484 aaPredicted RBP24.56■■□□□ 1.52
CCM2-211ENST00000478582 CASP3P42574 277 aa24.56■■□□□ 1.52
CCM2-211ENST00000478582 DESI1Q6ICB0 168 aa24.56■■□□□ 1.52
CCM2-211ENST00000478582 SLC2A7Q6PXP3 512 aa24.56■■□□□ 1.52
CCM2-211ENST00000478582 COX18Q8N8Q8 333 aa24.56■■□□□ 1.52
CCM2-211ENST00000478582 ST6GALNAC3Q8NDV1 305 aa24.56■■□□□ 1.52
CCM2-211ENST00000478582 RNF138Q8WVD3 245 aa24.56■■□□□ 1.52
CCM2-211ENST00000478582 EFHD2Q96C19 240 aaPredicted RBP24.56■■□□□ 1.52
CCM2-211ENST00000478582 RMND5BQ96G75 393 aaPredicted RBP24.56■■□□□ 1.52
CCM2-211ENST00000478582 OR7D2Q96RA2 312 aa24.56■■□□□ 1.52
CCM2-211ENST00000478582 NODALQ96S42 347 aa24.56■■□□□ 1.52
CCM2-211ENST00000478582 SERHL2Q9H4I8 314 aa24.56■■□□□ 1.52
CCM2-211ENST00000478582 SLC6A13Q9NSD5 602 aa24.56■■□□□ 1.52
CCM2-211ENST00000478582 KCNK2O95069 426 aa24.55■■□□□ 1.52
CCM2-211ENST00000478582 CHI3L1P36222 383 aaPredicted RBP24.55■■□□□ 1.52
CCM2-211ENST00000478582 POU6F2P78424 691 aaPredicted RBP24.55■■□□□ 1.52
CCM2-211ENST00000478582 TXNL4AP83876 142 aaKnown RBP24.55■■□□□ 1.52
CCM2-211ENST00000478582 PMP22Q01453 160 aa24.55■■□□□ 1.52
CCM2-211ENST00000478582 SNTA1Q13424 505 aa24.55■■□□□ 1.52
CCM2-211ENST00000478582 CPEB4Q17RY0 729 aaKnown RBP eCLIP24.55■■□□□ 1.52
CCM2-211ENST00000478582 GK5Q6ZS86 529 aa24.55■■□□□ 1.52
CCM2-211ENST00000478582 ZFP90Q8TF47 636 aa24.55■■□□□ 1.52
CCM2-211ENST00000478582 CDS1Q92903 461 aa24.55■■□□□ 1.52
CCM2-211ENST00000478582 PAIP1Q9H074 479 aaKnown RBP24.55■■□□□ 1.52
CCM2-211ENST00000478582 EXPH5Q8NEV8 1989 aa24.54■■□□□ 1.52
CCM2-211ENST00000478582 A0A096LPI6 279 aa24.54■■□□□ 1.52
CCM2-211ENST00000478582 A0A0G2JMM0 328 aa24.54■■□□□ 1.52
CCM2-211ENST00000478582 A0A1W2PPB8 328 aa24.54■■□□□ 1.52
CCM2-211ENST00000478582 A0A1W2PRS3 328 aa24.54■■□□□ 1.52
CCM2-211ENST00000478582 PINLYPA6NC86 204 aa24.54■■□□□ 1.52
CCM2-211ENST00000478582 KIR3DP1A8MWS1 328 aa24.54■■□□□ 1.52
CCM2-211ENST00000478582 ASNA1O43681 348 aa24.54■■□□□ 1.52
CCM2-211ENST00000478582 SEMA7AO75326 666 aa24.54■■□□□ 1.52
CCM2-211ENST00000478582 SNX4O95219 450 aa24.54■■□□□ 1.52
CCM2-211ENST00000478582 ANP32DO95626 131 aa24.54■■□□□ 1.52
CCM2-211ENST00000478582 IGKV1D-16P01601 117 aa24.54■■□□□ 1.52
CCM2-211ENST00000478582 CYP4B1P13584 511 aa24.54■■□□□ 1.52
CCM2-211ENST00000478582 EDN3P14138 238 aa24.54■■□□□ 1.52
CCM2-211ENST00000478582 HOXB9P17482 250 aaPredicted RBP24.54■■□□□ 1.52
CCM2-211ENST00000478582 LCN1P31025 176 aa24.54■■□□□ 1.52
CCM2-211ENST00000478582 MAGEA8P43361 318 aa24.54■■□□□ 1.52
CCM2-211ENST00000478582 DNASE1L1P49184 302 aa24.54■■□□□ 1.52
CCM2-211ENST00000478582 FOXO1Q12778 655 aa24.54■■□□□ 1.52
CCM2-211ENST00000478582 C6orf10Q5SRN2 563 aa24.54■■□□□ 1.52
CCM2-211ENST00000478582 LRIF1Q5T3J3 769 aa24.54■■□□□ 1.52
CCM2-211ENST00000478582 PRAMEF20Q5VT98 475 aa24.54■■□□□ 1.52
CCM2-211ENST00000478582 OTUB1Q96FW1 271 aaPredicted RBP24.54■■□□□ 1.52
CCM2-211ENST00000478582 FAM107BQ9H098 131 aa24.54■■□□□ 1.52
CCM2-211ENST00000478582 G3V3Y1 287 aa24.53■■□□□ 1.52
CCM2-211ENST00000478582 SLC22A2O15244 555 aa24.53■■□□□ 1.52
CCM2-211ENST00000478582 KRT75O95678 551 aa24.53■■□□□ 1.52
CCM2-211ENST00000478582 SNRPB2P08579 225 aaKnown RBP24.53■■□□□ 1.52
CCM2-211ENST00000478582 RPS26P62854 115 aaKnown RBP24.53■■□□□ 1.52
CCM2-211ENST00000478582 KLF10Q13118 480 aa24.53■■□□□ 1.52
CCM2-211ENST00000478582 HYAL4Q2M3T9 481 aa24.53■■□□□ 1.52
CCM2-211ENST00000478582 PAGE3Q5JUK9 113 aa24.53■■□□□ 1.52
CCM2-211ENST00000478582 SLC30A6Q6NXT4 461 aa24.53■■□□□ 1.52
CCM2-211ENST00000478582 NR4A3Q92570 626 aa24.53■■□□□ 1.52
CCM2-211ENST00000478582 SLX1AQ9BQ83 275 aa24.53■■□□□ 1.52
CCM2-211ENST00000478582 G6PC3Q9BUM1 346 aa24.53■■□□□ 1.52
CCM2-211ENST00000478582 OR51I1Q9H343 314 aa24.53■■□□□ 1.52
CCM2-211ENST00000478582 OLAHQ9NV23 265 aa24.53■■□□□ 1.52
CCM2-211ENST00000478582 TUBA8Q9NY65 449 aaPredicted RBP24.53■■□□□ 1.52
CCM2-211ENST00000478582 LEF1Q9UJU2 399 aaPredicted RBP24.53■■□□□ 1.52
CCM2-211ENST00000478582 NDUFAF1Q9Y375 327 aa24.53■■□□□ 1.52
CCM2-211ENST00000478582 PCDHB14Q9Y5E9 798 aa24.53■■□□□ 1.52
CCM2-211ENST00000478582 KCNE3Q9Y6H6 103 aa24.53■■□□□ 1.52
CCM2-211ENST00000478582 SEC23IPQ9Y6Y8 1000 aaKnown RBP24.53■■□□□ 1.52
CCM2-211ENST00000478582 LRRK2Q5S007 2527 aa24.52■■□□□ 1.52
CCM2-211ENST00000478582 CCDC22O60826 627 aa24.52■■□□□ 1.52
CCM2-211ENST00000478582 TRIM3O75382 744 aaPredicted RBP24.52■■□□□ 1.52
CCM2-211ENST00000478582 GLSO94925 669 aaPredicted RBP24.52■■□□□ 1.52
CCM2-211ENST00000478582 AGR2O95994 175 aa24.52■■□□□ 1.52
CCM2-211ENST00000478582 PTGDSP41222 190 aa24.52■■□□□ 1.52
CCM2-211ENST00000478582 KCNJ2P63252 427 aa24.52■■□□□ 1.52
CCM2-211ENST00000478582 RNFT1Q5M7Z0 435 aa24.52■■□□□ 1.52
CCM2-211ENST00000478582 BICRALQ6AI39 1079 aa24.52■■□□□ 1.52
CCM2-211ENST00000478582 PIGWQ7Z7B1 504 aa24.52■■□□□ 1.52
CCM2-211ENST00000478582 CHDHQ8NE62 594 aaPredicted RBP24.52■■□□□ 1.52
CCM2-211ENST00000478582 OR5D16Q8NGK9 328 aa24.52■■□□□ 1.52
CCM2-211ENST00000478582 PSMG3-AS1Q96PY0 264 aa24.52■■□□□ 1.52
CCM2-211ENST00000478582 DOHHQ9BU89 302 aa24.52■■□□□ 1.52
CCM2-211ENST00000478582 NMUR2Q9GZQ4 415 aa24.52■■□□□ 1.52
CCM2-211ENST00000478582 METTL7AQ9H8H3 244 aa24.52■■□□□ 1.52
CCM2-211ENST00000478582 TPT1P8Q9HAU6 139 aa24.52■■□□□ 1.52
CCM2-211ENST00000478582 IL1RL2Q9HB29 575 aa24.52■■□□□ 1.52
CCM2-211ENST00000478582 PTPN13Q12923 2485 aa24.52■■□□□ 1.52
Retrieved 100 of 20,778 RNA–protein pairs in 53.1 ms