RNA–Protein interactions for RNA: ENST00000477649.1

VMA21-203, Transcript of VMA21, vacuolar ATPase assembly factor, humanhuman

TSL 3

Gene VMA21, Length 485 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMA21-203ENST00000477649 DSCR3O14972 297 aa7.39□□□□□ -1.23
VMA21-203ENST00000477649 RGS10O43665 173 aa7.39□□□□□ -1.23
VMA21-203ENST00000477649 AHCYL1O43865 530 aa7.39□□□□□ -1.23
VMA21-203ENST00000477649 PCDHGA12O60330 932 aa7.39□□□□□ -1.23
VMA21-203ENST00000477649 SDC3O75056 442 aa7.39□□□□□ -1.23
VMA21-203ENST00000477649 NME6O75414 186 aaPredicted RBP7.39□□□□□ -1.23
VMA21-203ENST00000477649 CYP7B1O75881 506 aa7.39□□□□□ -1.23
VMA21-203ENST00000477649 SEC14L2O76054 403 aa7.39□□□□□ -1.23
VMA21-203ENST00000477649 CER1O95813 267 aa7.39□□□□□ -1.23
VMA21-203ENST00000477649 SYPP08247 313 aa7.39□□□□□ -1.23
VMA21-203ENST00000477649 HBQ1P09105 142 aa7.39□□□□□ -1.23
VMA21-203ENST00000477649 ENDOUP21128 410 aaKnown RBP7.39□□□□□ -1.23
VMA21-203ENST00000477649 ELK4P28324 431 aa7.39□□□□□ -1.23
VMA21-203ENST00000477649 CD1CP29017 333 aa7.39□□□□□ -1.23
VMA21-203ENST00000477649 GSTT1P30711 240 aa7.39□□□□□ -1.23
VMA21-203ENST00000477649 YAP1P46937 504 aaKnown RBP7.39□□□□□ -1.23
VMA21-203ENST00000477649 GCGRP47871 477 aa7.39□□□□□ -1.23
VMA21-203ENST00000477649 PDX1P52945 283 aa7.39□□□□□ -1.23
VMA21-203ENST00000477649 GFERP55789 205 aa7.39□□□□□ -1.23
VMA21-203ENST00000477649 RGS8P57771 180 aaPredicted RBP7.39□□□□□ -1.23
VMA21-203ENST00000477649 OR1D5P58170 312 aa7.39□□□□□ -1.23
VMA21-203ENST00000477649 SNRPGP62308 76 aaKnown RBP7.39□□□□□ -1.23
VMA21-203ENST00000477649 EEF1A1P68104 462 aaKnown RBP7.39□□□□□ -1.23
VMA21-203ENST00000477649 SLC35A2P78381 396 aa7.39□□□□□ -1.23
VMA21-203ENST00000477649 ZNF155Q12901 538 aaPredicted RBP7.39□□□□□ -1.23
VMA21-203ENST00000477649 GANABQ14697 944 aaKnown RBP7.39□□□□□ -1.23
VMA21-203ENST00000477649 DECR1Q16698 335 aa7.39□□□□□ -1.23
VMA21-203ENST00000477649 MEP1AQ16819 746 aa7.39□□□□□ -1.23
VMA21-203ENST00000477649 CTU2Q2VPK5 515 aaKnown RBP7.39□□□□□ -1.23
VMA21-203ENST00000477649 DEFB110Q30KQ9 67 aa7.39□□□□□ -1.23
VMA21-203ENST00000477649 PLK5Q496M5 336 aa7.39□□□□□ -1.23
VMA21-203ENST00000477649 CYP27C1Q4G0S4 372 aa7.39□□□□□ -1.23
VMA21-203ENST00000477649 TRMT12Q53H54 448 aaKnown RBP7.39□□□□□ -1.23
VMA21-203ENST00000477649 ENTPD8Q5MY95 495 aa7.39□□□□□ -1.23
VMA21-203ENST00000477649 SLC25A30Q5SVS4 291 aa7.39□□□□□ -1.23
VMA21-203ENST00000477649 MEDAGQ5VYS4 303 aa7.39□□□□□ -1.23
VMA21-203ENST00000477649 SLX4IPQ5VYV7 408 aa7.39□□□□□ -1.23
VMA21-203ENST00000477649 PRSS41Q7RTY9 318 aa7.39□□□□□ -1.23
VMA21-203ENST00000477649 ZNF550Q7Z398 422 aa7.39□□□□□ -1.23
VMA21-203ENST00000477649 KANSL1Q7Z3B3 1105 aa7.39□□□□□ -1.23
VMA21-203ENST00000477649 ERI1Q8IV48 349 aaKnown RBP7.39□□□□□ -1.23
VMA21-203ENST00000477649 C1orf210Q8IVY1 113 aa7.39□□□□□ -1.23
VMA21-203ENST00000477649 SLITRK4Q8IW52 837 aa7.39□□□□□ -1.23
VMA21-203ENST00000477649 OR4N5Q8IXE1 308 aa7.39□□□□□ -1.23
VMA21-203ENST00000477649 ZNF440Q8IYI8 595 aa7.39□□□□□ -1.23
VMA21-203ENST00000477649 SPARTQ8N0X7 666 aa7.39□□□□□ -1.23
VMA21-203ENST00000477649 CLDN22Q8N7P3 220 aa7.39□□□□□ -1.23
VMA21-203ENST00000477649 BPIFB6Q8NFQ5 453 aa7.39□□□□□ -1.23
VMA21-203ENST00000477649 OR4D9Q8NGE8 314 aa7.39□□□□□ -1.23
VMA21-203ENST00000477649 OR52R1Q8NGF1 315 aa7.39□□□□□ -1.23
VMA21-203ENST00000477649 OR5T3Q8NGG3 340 aa7.39□□□□□ -1.23
VMA21-203ENST00000477649 OR6T1Q8NGN1 323 aa7.39□□□□□ -1.23
VMA21-203ENST00000477649 OR13F1Q8NGS4 319 aa7.39□□□□□ -1.23
VMA21-203ENST00000477649 OR51Q1Q8NH59 317 aa7.39□□□□□ -1.23
VMA21-203ENST00000477649 OR52J3Q8NH60 311 aa7.39□□□□□ -1.23
VMA21-203ENST00000477649 VANGL1Q8TAA9 524 aaPredicted RBP7.39□□□□□ -1.23
VMA21-203ENST00000477649 GPR151Q8TDV0 419 aa7.39□□□□□ -1.23
VMA21-203ENST00000477649 ACOT11Q8WXI4 607 aaPredicted RBP7.39□□□□□ -1.23
VMA21-203ENST00000477649 PEX11GQ96HA9 241 aa7.39□□□□□ -1.23
VMA21-203ENST00000477649 HS6ST2Q96MM7 605 aa7.39□□□□□ -1.23
VMA21-203ENST00000477649 CCNL2Q96S94 520 aaPredicted RBP7.39□□□□□ -1.23
VMA21-203ENST00000477649 DOK1Q99704 481 aa7.39□□□□□ -1.23
VMA21-203ENST00000477649 ALOXE3Q9BYJ1 711 aa7.39□□□□□ -1.23
VMA21-203ENST00000477649 YIPF3Q9GZM5 350 aa7.39□□□□□ -1.23
VMA21-203ENST00000477649 RACGAP1Q9H0H5 632 aa7.39□□□□□ -1.23
VMA21-203ENST00000477649 MKKSQ9NPJ1 570 aaPredicted RBP7.39□□□□□ -1.23
VMA21-203ENST00000477649 ST6GALNAC1Q9NSC7 600 aaPredicted RBP7.39□□□□□ -1.23
VMA21-203ENST00000477649 STARD5Q9NSY2 213 aa7.39□□□□□ -1.23
VMA21-203ENST00000477649 RYDENQ9NUL5 291 aaKnown RBP7.39□□□□□ -1.23
VMA21-203ENST00000477649 CLN6Q9NWW5 311 aa7.39□□□□□ -1.23
VMA21-203ENST00000477649 FTSJ1Q9UET6 329 aa7.39□□□□□ -1.23
VMA21-203ENST00000477649 HEMK1Q9Y5R4 338 aaPredicted RBP7.39□□□□□ -1.23
VMA21-203ENST00000477649 CEPT1Q9Y6K0 416 aa7.39□□□□□ -1.23
VMA21-203ENST00000477649 CACNA1IQ9P0X4 2223 aa7.39□□□□□ -1.23
VMA21-203ENST00000477649 NUP214P35658 2090 aaPredicted RBP7.39□□□□□ -1.23
VMA21-203ENST00000477649 MDC1Q14676 2089 aaKnown RBP7.39□□□□□ -1.23
VMA21-203ENST00000477649 ARHGEF17Q96PE2 2063 aaPredicted RBP7.39□□□□□ -1.23
VMA21-203ENST00000477649 TRBV4-1A0A0J9YWV2 114 aa7.38□□□□□ -1.23
VMA21-203ENST00000477649 A0A1B0GX78 115 aa7.38□□□□□ -1.23
VMA21-203ENST00000477649 A0A1W2PS29 197 aa7.38□□□□□ -1.23
VMA21-203ENST00000477649 EME2A4GXA9 379 aaPredicted RBP7.38□□□□□ -1.23
VMA21-203ENST00000477649 TRAPPC13A5PLN9 417 aa7.38□□□□□ -1.23
VMA21-203ENST00000477649 CDHR4A6H8M9 788 aa7.38□□□□□ -1.23
VMA21-203ENST00000477649 FAM227AF5H4B4 570 aa7.38□□□□□ -1.23
VMA21-203ENST00000477649 H3BMH7 237 aa7.38□□□□□ -1.23
VMA21-203ENST00000477649 M0R3H8 397 aa7.38□□□□□ -1.23
VMA21-203ENST00000477649 B4GAT1O43505 415 aa7.38□□□□□ -1.23
VMA21-203ENST00000477649 HCRTR1O43613 425 aa7.38□□□□□ -1.23
VMA21-203ENST00000477649 FAM20BO75063 409 aa7.38□□□□□ -1.23
VMA21-203ENST00000477649 DNAJB6O75190 326 aa7.38□□□□□ -1.23
VMA21-203ENST00000477649 TRMUO75648 421 aaKnown RBP7.38□□□□□ -1.23
VMA21-203ENST00000477649 CBX7O95931 251 aa7.38□□□□□ -1.23
VMA21-203ENST00000477649 GASTP01350 101 aa7.38□□□□□ -1.23
VMA21-203ENST00000477649 GIMD1P0DJR0 217 aa7.38□□□□□ -1.23
VMA21-203ENST00000477649 PIPP12273 146 aaPredicted RBP7.38□□□□□ -1.23
VMA21-203ENST00000477649 CYP4B1P13584 511 aa7.38□□□□□ -1.23
VMA21-203ENST00000477649 S1PR1P21453 382 aa7.38□□□□□ -1.23
VMA21-203ENST00000477649 CHMP24386 653 aa7.38□□□□□ -1.23
VMA21-203ENST00000477649 DCKP27707 260 aa7.38□□□□□ -1.23
VMA21-203ENST00000477649 GABRA3P34903 492 aa7.38□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 78.6 ms