RNA–Protein interactions for RNA: ENST00000477538.1

VHL-203, Transcript of von Hippel-Lindau tumor suppressor, humanhuman

TSL 1 (best)

Gene VHL, Length 958 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VHL-203ENST00000477538 IL12BP29460 328 aa14.92□□□□□ -0.02
VHL-203ENST00000477538 SOX3P41225 446 aa14.92□□□□□ -0.02
VHL-203ENST00000477538 TMED10P49755 219 aaKnown RBP14.92□□□□□ -0.02
VHL-203ENST00000477538 ST13P50502 369 aaKnown RBP14.92□□□□□ -0.02
VHL-203ENST00000477538 PSMD4P55036 377 aaKnown RBP14.92□□□□□ -0.02
VHL-203ENST00000477538 CDK6Q00534 326 aa14.92□□□□□ -0.02
VHL-203ENST00000477538 RBBP4Q09028 425 aa14.92□□□□□ -0.02
VHL-203ENST00000477538 SCARB2Q14108 478 aa14.92□□□□□ -0.02
VHL-203ENST00000477538 VMACQ2NL98 169 aa14.92□□□□□ -0.02
VHL-203ENST00000477538 SPATS1Q496A3 300 aa14.92□□□□□ -0.02
VHL-203ENST00000477538 ERICH5Q6P6B1 374 aa14.92□□□□□ -0.02
VHL-203ENST00000477538 OPN5Q6U736 354 aa14.92□□□□□ -0.02
VHL-203ENST00000477538 LYPD8Q6UX82 237 aa14.92□□□□□ -0.02
VHL-203ENST00000477538 ISLR2Q6UXK2 745 aa14.92□□□□□ -0.02
VHL-203ENST00000477538 GALNT10Q86SR1 603 aa14.92□□□□□ -0.02
VHL-203ENST00000477538 MICU2Q8IYU8 434 aa14.92□□□□□ -0.02
VHL-203ENST00000477538 BEST3Q8N1M1 668 aa14.92□□□□□ -0.02
VHL-203ENST00000477538 TMEM156Q8N614 296 aa14.92□□□□□ -0.02
VHL-203ENST00000477538 ANKFN1Q8N957 763 aa14.92□□□□□ -0.02
VHL-203ENST00000477538 FAM110BQ8TC76 370 aa14.92□□□□□ -0.02
VHL-203ENST00000477538 SLC38A5Q8WUX1 472 aa14.92□□□□□ -0.02
VHL-203ENST00000477538 EFHD2Q96C19 240 aaPredicted RBP14.92□□□□□ -0.02
VHL-203ENST00000477538 TMEM19Q96HH6 336 aa14.92□□□□□ -0.02
VHL-203ENST00000477538 TRNT1Q96Q11 434 aaKnown RBP14.92□□□□□ -0.02
VHL-203ENST00000477538 SDF2Q99470 211 aa14.92□□□□□ -0.02
VHL-203ENST00000477538 KCTD14Q9BQ13 255 aaPredicted RBP14.92□□□□□ -0.02
VHL-203ENST00000477538 G6PC3Q9BUM1 346 aa14.92□□□□□ -0.02
VHL-203ENST00000477538 ZNF552Q9H707 407 aaPredicted RBP14.92□□□□□ -0.02
VHL-203ENST00000477538 STMN3Q9NZ72 180 aa14.92□□□□□ -0.02
VHL-203ENST00000477538 ELOVL7A1L3X0 281 aa14.91□□□□□ -0.02
VHL-203ENST00000477538 GSC2O15499 205 aa14.91□□□□□ -0.02
VHL-203ENST00000477538 TSPAN2O60636 221 aa14.91□□□□□ -0.02
VHL-203ENST00000477538 PPM1BO75688 479 aa14.91□□□□□ -0.02
VHL-203ENST00000477538 H6PDO95479 791 aa14.91□□□□□ -0.02
VHL-203ENST00000477538 IL33O95760 270 aa14.91□□□□□ -0.02
VHL-203ENST00000477538 CHRM4P08173 479 aa14.91□□□□□ -0.02
VHL-203ENST00000477538 FBXO45P0C2W1 286 aa14.91□□□□□ -0.02
VHL-203ENST00000477538 HSD17B1P14061 328 aa14.91□□□□□ -0.02
VHL-203ENST00000477538 NAGAP17050 411 aa14.91□□□□□ -0.02
VHL-203ENST00000477538 TCN1P20061 433 aaPredicted RBP14.91□□□□□ -0.02
VHL-203ENST00000477538 ATP6V1C1P21283 382 aa14.91□□□□□ -0.02
VHL-203ENST00000477538 CRISP3P54108 245 aa14.91□□□□□ -0.02
VHL-203ENST00000477538 PNLIPRP2P54317 469 aa14.91□□□□□ -0.02
VHL-203ENST00000477538 CEACAM7Q14002 265 aa14.91□□□□□ -0.02
VHL-203ENST00000477538 GNA13Q14344 377 aa14.91□□□□□ -0.02
VHL-203ENST00000477538 MAPK11Q15759 364 aa14.91□□□□□ -0.02
VHL-203ENST00000477538 TBR1Q16650 682 aa14.91□□□□□ -0.02
VHL-203ENST00000477538 CPEB4Q17RY0 729 aaKnown RBP eCLIP14.91□□□□□ -0.02
VHL-203ENST00000477538 REEP3Q6NUK4 255 aa14.91□□□□□ -0.02
VHL-203ENST00000477538 LINC00696Q6ZRV3 163 aa14.91□□□□□ -0.02
VHL-203ENST00000477538 OLIG3Q7RTU3 272 aa14.91□□□□□ -0.02
VHL-203ENST00000477538 METTL25Q8N6Q8 603 aa14.91□□□□□ -0.02
VHL-203ENST00000477538 DIO2Q92813 273 aa14.91□□□□□ -0.02
VHL-203ENST00000477538 MCUR1Q96AQ8 359 aa14.91□□□□□ -0.02
VHL-203ENST00000477538 SPACA9Q96E40 222 aaPredicted RBP14.91□□□□□ -0.02
VHL-203ENST00000477538 CADM1Q9BY67 442 aaKnown RBP14.91□□□□□ -0.02
VHL-203ENST00000477538 ZNF350Q9GZX5 532 aa14.91□□□□□ -0.02
VHL-203ENST00000477538 RUBCNLQ9H714 662 aa14.91□□□□□ -0.02
VHL-203ENST00000477538 FBXO34Q9NWN3 711 aa14.91□□□□□ -0.02
VHL-203ENST00000477538 CALML5Q9NZT1 146 aa14.91□□□□□ -0.02
VHL-203ENST00000477538 CD300AQ9UGN4 299 aa14.91□□□□□ -0.02
VHL-203ENST00000477538 ANGPT4Q9Y264 503 aa14.91□□□□□ -0.02
VHL-203ENST00000477538 ERICH4A6NGS2 130 aa14.9□□□□□ -0.02
VHL-203ENST00000477538 OR6C70A6NIJ9 312 aa14.9□□□□□ -0.02
VHL-203ENST00000477538 RRP9O43818 475 aaKnown RBP14.9□□□□□ -0.02
VHL-203ENST00000477538 ABCB7O75027 752 aa14.9□□□□□ -0.02
VHL-203ENST00000477538 STX11O75558 287 aa14.9□□□□□ -0.02
VHL-203ENST00000477538 PDE5AO76074 875 aa14.9□□□□□ -0.02
VHL-203ENST00000477538 OR6B1O95007 311 aa14.9□□□□□ -0.02
VHL-203ENST00000477538 ALPPP05187 535 aa14.9□□□□□ -0.02
VHL-203ENST00000477538 PCGF2P35227 344 aa14.9□□□□□ -0.02
VHL-203ENST00000477538 PGM1P36871 562 aa14.9□□□□□ -0.02
VHL-203ENST00000477538 MFAP5Q13361 173 aa14.9□□□□□ -0.02
VHL-203ENST00000477538 NTRK2Q16620 822 aa14.9□□□□□ -0.02
VHL-203ENST00000477538 RPS26P11Q5JNZ5 115 aaPredicted RBP14.9□□□□□ -0.02
VHL-203ENST00000477538 FRRS1Q6ZNA5 592 aa14.9□□□□□ -0.02
VHL-203ENST00000477538 LRRC74BQ6ZQY2 392 aa14.9□□□□□ -0.02
VHL-203ENST00000477538 ASRGL1Q7L266 308 aa14.9□□□□□ -0.02
VHL-203ENST00000477538 ZAR1Q86SH2 424 aa14.9□□□□□ -0.02
VHL-203ENST00000477538 SLC30A8Q8IWU4 369 aa14.9□□□□□ -0.02
VHL-203ENST00000477538 DND1Q8IYX4 353 aaKnown RBP14.9□□□□□ -0.02
VHL-203ENST00000477538 FAM156AQ8NDB6 213 aa14.9□□□□□ -0.02
VHL-203ENST00000477538 HIPK4Q8NE63 616 aa14.9□□□□□ -0.02
VHL-203ENST00000477538 TNIP2Q8NFZ5 429 aa14.9□□□□□ -0.02
VHL-203ENST00000477538 EXTL1Q92935 676 aa14.9□□□□□ -0.02
VHL-203ENST00000477538 CLPTM1LQ96KA5 538 aa14.9□□□□□ -0.02
VHL-203ENST00000477538 COL21A1Q96P44 957 aa14.9□□□□□ -0.02
VHL-203ENST00000477538 ADOQ96SZ5 270 aa14.9□□□□□ -0.02
VHL-203ENST00000477538 SLC38A1Q9H2H9 487 aa14.9□□□□□ -0.02
VHL-203ENST00000477538 ZBTB20Q9HC78 741 aaPredicted RBP14.9□□□□□ -0.02
VHL-203ENST00000477538 POLE3Q9NRF9 147 aa14.9□□□□□ -0.02
VHL-203ENST00000477538 HPF1Q9NWY4 346 aa14.9□□□□□ -0.02
VHL-203ENST00000477538 WDR45Q9Y484 360 aa14.9□□□□□ -0.02
VHL-203ENST00000477538 ZNF451Q9Y4E5 1061 aa14.9□□□□□ -0.02
VHL-203ENST00000477538 NCKAP5O14513 1909 aa14.9□□□□□ -0.02
VHL-203ENST00000477538 GSTA4O15217 222 aa14.89□□□□□ -0.03
VHL-203ENST00000477538 HS6ST1O60243 411 aa14.89□□□□□ -0.03
VHL-203ENST00000477538 FCMRO60667 390 aa14.89□□□□□ -0.03
VHL-203ENST00000477538 UGT2B11O75310 529 aa14.89□□□□□ -0.03
VHL-203ENST00000477538 ZIC2O95409 532 aaPredicted RBP14.89□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms