RNA–Protein interactions for RNA: ENST00000477429.1

COL4A5-204, Transcript of collagen type IV alpha 5 chain, humanhuman

TSL 1 (best)

Gene COL4A5, Length 564 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A5-204ENST00000477429 A8MV72 311 aaPredicted RBP8.72□□□□□ -1.01
COL4A5-204ENST00000477429 H3BML4 177 aa8.72□□□□□ -1.01
COL4A5-204ENST00000477429 FOXE1O00358 373 aaPredicted RBP8.72□□□□□ -1.01
COL4A5-204ENST00000477429 TLX2O43763 284 aaPredicted RBP8.72□□□□□ -1.01
COL4A5-204ENST00000477429 GMFGO60234 142 aa8.72□□□□□ -1.01
COL4A5-204ENST00000477429 FADS1O60427 444 aa8.72□□□□□ -1.01
COL4A5-204ENST00000477429 S100BP04271 92 aaPredicted RBP8.72□□□□□ -1.01
COL4A5-204ENST00000477429 HK1P19367 917 aa8.72□□□□□ -1.01
COL4A5-204ENST00000477429 GCKP35557 465 aa8.72□□□□□ -1.01
COL4A5-204ENST00000477429 ARFIP1P53367 373 aa8.72□□□□□ -1.01
COL4A5-204ENST00000477429 DSCR4P56555 118 aaPredicted RBP8.72□□□□□ -1.01
COL4A5-204ENST00000477429 EEF1A1P68104 462 aaKnown RBP8.72□□□□□ -1.01
COL4A5-204ENST00000477429 FAPQ12884 760 aa8.72□□□□□ -1.01
COL4A5-204ENST00000477429 STX5Q13190 355 aa8.72□□□□□ -1.01
COL4A5-204ENST00000477429 GTF2H2Q13888 395 aa8.72□□□□□ -1.01
COL4A5-204ENST00000477429 TMEM44Q2T9K0 475 aa8.72□□□□□ -1.01
COL4A5-204ENST00000477429 CHRFAM7AQ494W8 412 aa8.72□□□□□ -1.01
COL4A5-204ENST00000477429 ZNF628Q5EBL2 1059 aa8.72□□□□□ -1.01
COL4A5-204ENST00000477429 SGO1Q5FBB7 561 aa8.72□□□□□ -1.01
COL4A5-204ENST00000477429 C6orf52Q5T4I8 152 aa8.72□□□□□ -1.01
COL4A5-204ENST00000477429 UBAP2Q5T6F2 1119 aaKnown RBP8.72□□□□□ -1.01
COL4A5-204ENST00000477429 EEF1A1P5Q5VTE0 462 aa8.72□□□□□ -1.01
COL4A5-204ENST00000477429 RAET1LQ5VY80 246 aa8.72□□□□□ -1.01
COL4A5-204ENST00000477429 LIPJQ5W064 366 aa8.72□□□□□ -1.01
COL4A5-204ENST00000477429 GTF2H2CQ6P1K8 395 aa8.72□□□□□ -1.01
COL4A5-204ENST00000477429 APOOLQ6UXV4 268 aa8.72□□□□□ -1.01
COL4A5-204ENST00000477429 IL17RELQ6ZVW7 336 aa8.72□□□□□ -1.01
COL4A5-204ENST00000477429 LARP4Q71RC2 724 aaKnown RBP eCLIP8.72□□□□□ -1.01
COL4A5-204ENST00000477429 COMMD6Q7Z4G1 85 aa8.72□□□□□ -1.01
COL4A5-204ENST00000477429 KBTBD8Q8NFY9 601 aa8.72□□□□□ -1.01
COL4A5-204ENST00000477429 CAVIN3Q969G5 261 aa8.72□□□□□ -1.01
COL4A5-204ENST00000477429 S100PBPQ96BU1 408 aa8.72□□□□□ -1.01
COL4A5-204ENST00000477429 C19orf24Q9BVV8 132 aa8.72□□□□□ -1.01
COL4A5-204ENST00000477429 IPPKQ9H8X2 491 aa8.72□□□□□ -1.01
COL4A5-204ENST00000477429 FOLH1BQ9HBA9 442 aa8.72□□□□□ -1.01
COL4A5-204ENST00000477429 ZBTB26Q9HCK0 441 aa8.72□□□□□ -1.01
COL4A5-204ENST00000477429 SNX24Q9Y343 169 aa8.72□□□□□ -1.01
COL4A5-204ENST00000477429 CLOCKO15516 846 aa8.71□□□□□ -1.02
COL4A5-204ENST00000477429 RAMP1O60894 148 aa8.71□□□□□ -1.02
COL4A5-204ENST00000477429 IFNA2P01563 188 aa8.71□□□□□ -1.02
COL4A5-204ENST00000477429 LTA4HP09960 611 aaKnown RBP8.71□□□□□ -1.02
COL4A5-204ENST00000477429 FAM157CP0CG43 387 aa8.71□□□□□ -1.02
COL4A5-204ENST00000477429 PEPDP12955 493 aa8.71□□□□□ -1.02
COL4A5-204ENST00000477429 CHN1P15882 459 aa8.71□□□□□ -1.02
COL4A5-204ENST00000477429 IL11P20809 199 aa8.71□□□□□ -1.02
COL4A5-204ENST00000477429 OCRLQ01968 901 aa8.71□□□□□ -1.02
COL4A5-204ENST00000477429 TRAF3Q13114 568 aa8.71□□□□□ -1.02
COL4A5-204ENST00000477429 CCNYL2Q5T2Q4 361 aa8.71□□□□□ -1.02
COL4A5-204ENST00000477429 ADAM5Q6NVV9 412 aa8.71□□□□□ -1.02
COL4A5-204ENST00000477429 MARCH3Q86UD3 253 aa8.71□□□□□ -1.02
COL4A5-204ENST00000477429 LSRQ86X29 649 aaPredicted RBP8.71□□□□□ -1.02
COL4A5-204ENST00000477429 CCDC116Q8IYX3 515 aa8.71□□□□□ -1.02
COL4A5-204ENST00000477429 METTL4Q8N3J2 472 aa8.71□□□□□ -1.02
COL4A5-204ENST00000477429 METTL25Q8N6Q8 603 aa8.71□□□□□ -1.02
COL4A5-204ENST00000477429 OR4K17Q8NGC6 315 aa8.71□□□□□ -1.02
COL4A5-204ENST00000477429 OR9A2Q8NGT5 310 aa8.71□□□□□ -1.02
COL4A5-204ENST00000477429 SMAP2Q8WU79 429 aaPredicted RBP8.71□□□□□ -1.02
COL4A5-204ENST00000477429 KLHL29Q96CT2 875 aa8.71□□□□□ -1.02
COL4A5-204ENST00000477429 TMCO6Q96DC7 493 aa8.71□□□□□ -1.02
COL4A5-204ENST00000477429 TSPAN17Q96FV3 270 aa8.71□□□□□ -1.02
COL4A5-204ENST00000477429 ADGRG7Q96K78 797 aa8.71□□□□□ -1.02
COL4A5-204ENST00000477429 HBEGFQ99075 208 aa8.71□□□□□ -1.02
COL4A5-204ENST00000477429 CENPKQ9BS16 269 aa8.71□□□□□ -1.02
COL4A5-204ENST00000477429 NTMT1Q9BV86 223 aa8.71□□□□□ -1.02
COL4A5-204ENST00000477429 NOL11Q9H8H0 719 aaKnown RBP8.71□□□□□ -1.02
COL4A5-204ENST00000477429 SNX12Q9UMY4 172 aa8.71□□□□□ -1.02
COL4A5-204ENST00000477429 ZNF175Q9Y473 711 aa8.71□□□□□ -1.02
COL4A5-204ENST00000477429 DPRXA6NFQ7 191 aa8.7□□□□□ -1.02
COL4A5-204ENST00000477429 SSX4O60224 188 aa8.7□□□□□ -1.02
COL4A5-204ENST00000477429 SS18L1O75177 396 aaPredicted RBP8.7□□□□□ -1.02
COL4A5-204ENST00000477429 GCM2O75603 506 aaPredicted RBP8.7□□□□□ -1.02
COL4A5-204ENST00000477429 SEMA3DO95025 777 aa8.7□□□□□ -1.02
COL4A5-204ENST00000477429 TP53P04637 393 aaPredicted RBP8.7□□□□□ -1.02
COL4A5-204ENST00000477429 TSPAN8P19075 237 aa8.7□□□□□ -1.02
COL4A5-204ENST00000477429 CSNK2A2P19784 350 aaPredicted RBP8.7□□□□□ -1.02
COL4A5-204ENST00000477429 EDNRAP25101 427 aa8.7□□□□□ -1.02
COL4A5-204ENST00000477429 SHC1P29353 583 aa8.7□□□□□ -1.02
COL4A5-204ENST00000477429 EVI2BP34910 448 aa8.7□□□□□ -1.02
COL4A5-204ENST00000477429 IDUAP35475 653 aa8.7□□□□□ -1.02
COL4A5-204ENST00000477429 GP5P40197 560 aa8.7□□□□□ -1.02
COL4A5-204ENST00000477429 MAPK12P53778 367 aa8.7□□□□□ -1.02
COL4A5-204ENST00000477429 PSG6Q00889 435 aa8.7□□□□□ -1.02
COL4A5-204ENST00000477429 SLMAPQ14BN4 828 aa8.7□□□□□ -1.02
COL4A5-204ENST00000477429 TAB1Q15750 504 aa8.7□□□□□ -1.02
COL4A5-204ENST00000477429 TMEM249Q2WGJ8 235 aa8.7□□□□□ -1.02
COL4A5-204ENST00000477429 TCHHL1Q5QJ38 904 aaPredicted RBP8.7□□□□□ -1.02
COL4A5-204ENST00000477429 NCMAPQ5T1S8 102 aa8.7□□□□□ -1.02
COL4A5-204ENST00000477429 LGSNQ5TDP6 509 aa8.7□□□□□ -1.02
COL4A5-204ENST00000477429 CHMP1BQ7LBR1 199 aa8.7□□□□□ -1.02
COL4A5-204ENST00000477429 NUFIP2Q7Z417 695 aaKnown RBP8.7□□□□□ -1.02
COL4A5-204ENST00000477429 SLC44A2Q8IWA5 706 aaPredicted RBP8.7□□□□□ -1.02
COL4A5-204ENST00000477429 LRRC8AQ8IWT6 810 aa8.7□□□□□ -1.02
COL4A5-204ENST00000477429 PLD6Q8N2A8 252 aaKnown RBP8.7□□□□□ -1.02
COL4A5-204ENST00000477429 ANKK1Q8NFD2 765 aa8.7□□□□□ -1.02
COL4A5-204ENST00000477429 OR7G2Q8NG99 324 aa8.7□□□□□ -1.02
COL4A5-204ENST00000477429 DUSP19Q8WTR2 217 aa8.7□□□□□ -1.02
COL4A5-204ENST00000477429 C1GALT1C1Q96EU7 318 aa8.7□□□□□ -1.02
COL4A5-204ENST00000477429 SERPINI1Q99574 410 aa8.7□□□□□ -1.02
COL4A5-204ENST00000477429 CPNE1Q99829 537 aa8.7□□□□□ -1.02
COL4A5-204ENST00000477429 LRRC1Q9BTT6 524 aa8.7□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms