RNA–Protein interactions for RNA: ENST00000477152.5

BRCA1-214, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 1,980 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-214ENST00000477152 LRRC3CA6NJW4 275 aa6.62□□□□□ -1.35
BRCA1-214ENST00000477152 H0Y3Z8 333 aa6.62□□□□□ -1.35
BRCA1-214ENST00000477152 KLHL2O95198 593 aa6.62□□□□□ -1.35
BRCA1-214ENST00000477152 ACSL3O95573 720 aa6.62□□□□□ -1.35
BRCA1-214ENST00000477152 RFPL3SP0C7P2 107 aa6.62□□□□□ -1.35
BRCA1-214ENST00000477152 EPORP19235 508 aa6.62□□□□□ -1.35
BRCA1-214ENST00000477152 CSNK2A2P19784 350 aaPredicted RBP6.62□□□□□ -1.35
BRCA1-214ENST00000477152 TYK2P29597 1187 aa6.62□□□□□ -1.35
BRCA1-214ENST00000477152 ADSLP30566 484 aaPredicted RBP6.62□□□□□ -1.35
BRCA1-214ENST00000477152 MAGEA4P43358 317 aa6.62□□□□□ -1.35
BRCA1-214ENST00000477152 SERPINB8P50452 374 aa6.62□□□□□ -1.35
BRCA1-214ENST00000477152 XKP51811 444 aa6.62□□□□□ -1.35
BRCA1-214ENST00000477152 NEK2P51955 445 aa6.62□□□□□ -1.35
BRCA1-214ENST00000477152 HNRNPH2P55795 449 aaKnown RBP6.62□□□□□ -1.35
BRCA1-214ENST00000477152 TRA2BP62995 288 aaKnown RBP6.62□□□□□ -1.35
BRCA1-214ENST00000477152 OCRLQ01968 901 aa6.62□□□□□ -1.35
BRCA1-214ENST00000477152 FUT7Q11130 342 aa6.62□□□□□ -1.35
BRCA1-214ENST00000477152 DEFB113Q30KQ7 82 aa6.62□□□□□ -1.35
BRCA1-214ENST00000477152 KBTBD12Q3ZCT8 623 aa6.62□□□□□ -1.35
BRCA1-214ENST00000477152 TIGD3Q6B0B8 471 aa6.62□□□□□ -1.35
BRCA1-214ENST00000477152 OR2A2Q6IF42 318 aa6.62□□□□□ -1.35
BRCA1-214ENST00000477152 ADNP2Q6IQ32 1131 aa6.62□□□□□ -1.35
BRCA1-214ENST00000477152 L3MBTL4Q8NA19 623 aa6.62□□□□□ -1.35
BRCA1-214ENST00000477152 TNIP2Q8NFZ5 429 aa6.62□□□□□ -1.35
BRCA1-214ENST00000477152 OR14L1PQ8NHC6 308 aa6.62□□□□□ -1.35
BRCA1-214ENST00000477152 MBD3L2Q8NHZ7 208 aaPredicted RBP6.62□□□□□ -1.35
BRCA1-214ENST00000477152 SH3GL2Q99962 352 aa6.62□□□□□ -1.35
BRCA1-214ENST00000477152 WDR83Q9BRX9 315 aaKnown RBP6.62□□□□□ -1.35
BRCA1-214ENST00000477152 LRRC1Q9BTT6 524 aa6.62□□□□□ -1.35
BRCA1-214ENST00000477152 RBM24Q9BX46 236 aaKnown RBP6.62□□□□□ -1.35
BRCA1-214ENST00000477152 OSBPL11Q9BXB4 747 aa6.62□□□□□ -1.35
BRCA1-214ENST00000477152 DPH5Q9H2P9 285 aa6.62□□□□□ -1.35
BRCA1-214ENST00000477152 ELOVL6Q9H5J4 265 aa6.62□□□□□ -1.35
BRCA1-214ENST00000477152 CXorf21Q9HAI6 301 aa6.62□□□□□ -1.35
BRCA1-214ENST00000477152 SMYD2Q9NRG4 433 aa6.62□□□□□ -1.35
BRCA1-214ENST00000477152 GIMAP4Q9NUV9 329 aa6.62□□□□□ -1.35
BRCA1-214ENST00000477152 TEX10Q9NXF1 929 aaPredicted RBP6.62□□□□□ -1.35
BRCA1-214ENST00000477152 ZNF226Q9NYT6 803 aa6.62□□□□□ -1.35
BRCA1-214ENST00000477152 CPSF2Q9P2I0 782 aaKnown RBP6.62□□□□□ -1.35
BRCA1-214ENST00000477152 BCAP29Q9UHQ4 241 aa6.62□□□□□ -1.35
BRCA1-214ENST00000477152 SNX6Q9UNH7 406 aa6.62□□□□□ -1.35
BRCA1-214ENST00000477152 ASB4Q9Y574 426 aa6.62□□□□□ -1.35
BRCA1-214ENST00000477152 FREM3P0C091 2139 aa6.62□□□□□ -1.35
BRCA1-214ENST00000477152 UQCRHLA0A096LP55 91 aa6.61□□□□□ -1.35
BRCA1-214ENST00000477152 A0A1W2PR48 441 aa6.61□□□□□ -1.35
BRCA1-214ENST00000477152 CCDC151A5D8V7 595 aa6.61□□□□□ -1.35
BRCA1-214ENST00000477152 PRAMEF25A6NGN4 478 aa6.61□□□□□ -1.35
BRCA1-214ENST00000477152 CXorf49A8MYA2 514 aaPredicted RBP6.61□□□□□ -1.35
BRCA1-214ENST00000477152 PRAMEF4O60810 478 aa6.61□□□□□ -1.35
BRCA1-214ENST00000477152 AIFM1O95831 613 aa6.61□□□□□ -1.35
BRCA1-214ENST00000477152 CRHP06850 196 aa6.61□□□□□ -1.35
BRCA1-214ENST00000477152 CPMP14384 443 aa6.61□□□□□ -1.35
BRCA1-214ENST00000477152 CPN1P15169 458 aa6.61□□□□□ -1.35
BRCA1-214ENST00000477152 FPR1P21462 350 aa6.61□□□□□ -1.35
BRCA1-214ENST00000477152 THBS2P35442 1172 aa6.61□□□□□ -1.35
BRCA1-214ENST00000477152 BSGP35613 385 aa6.61□□□□□ -1.35
BRCA1-214ENST00000477152 CASP3P42574 277 aa6.61□□□□□ -1.35
BRCA1-214ENST00000477152 CLK3P49761 638 aaKnown RBP6.61□□□□□ -1.35
BRCA1-214ENST00000477152 MAPK12P53778 367 aa6.61□□□□□ -1.35
BRCA1-214ENST00000477152 PLTPP55058 493 aa6.61□□□□□ -1.35
BRCA1-214ENST00000477152 FBXW4P57775 412 aa6.61□□□□□ -1.35
BRCA1-214ENST00000477152 PLCXD2Q0VAA5 305 aa6.61□□□□□ -1.35
BRCA1-214ENST00000477152 EFR3AQ14156 821 aa6.61□□□□□ -1.35
BRCA1-214ENST00000477152 ERCC6LQ2NKX8 1250 aa6.61□□□□□ -1.35
BRCA1-214ENST00000477152 PRAMEF9Q5VWM5 478 aa6.61□□□□□ -1.35
BRCA1-214ENST00000477152 ANGPTL8Q6UXH0 198 aa6.61□□□□□ -1.35
BRCA1-214ENST00000477152 P4HA3Q7Z4N8 544 aa6.61□□□□□ -1.35
BRCA1-214ENST00000477152 IFNEQ86WN2 208 aa6.61□□□□□ -1.35
BRCA1-214ENST00000477152 LILRA2Q8N149 483 aa6.61□□□□□ -1.35
BRCA1-214ENST00000477152 RELL2Q8NC24 303 aaPredicted RBP6.61□□□□□ -1.35
BRCA1-214ENST00000477152 SMPDL3BQ92485 455 aa6.61□□□□□ -1.35
BRCA1-214ENST00000477152 PIGTQ969N2 578 aa6.61□□□□□ -1.35
BRCA1-214ENST00000477152 NXNL1Q96CM4 212 aa6.61□□□□□ -1.35
BRCA1-214ENST00000477152 ERP27Q96DN0 273 aa6.61□□□□□ -1.35
BRCA1-214ENST00000477152 LCORQ96JN0 433 aaPredicted RBP6.61□□□□□ -1.35
BRCA1-214ENST00000477152 EPB41L4BQ9H329 900 aa6.61□□□□□ -1.35
BRCA1-214ENST00000477152 PFDN4Q9NQP4 134 aa6.61□□□□□ -1.35
BRCA1-214ENST00000477152 SDHAF3Q9NRP4 125 aa6.61□□□□□ -1.35
BRCA1-214ENST00000477152 MRTO4Q9UKD2 239 aaKnown RBP6.61□□□□□ -1.35
BRCA1-214ENST00000477152 STK38LQ9Y2H1 464 aa6.61□□□□□ -1.35
BRCA1-214ENST00000477152 FBN2P35556 2912 aa6.61□□□□□ -1.35
BRCA1-214ENST00000477152 NCKAP5O14513 1909 aa6.61□□□□□ -1.35
BRCA1-214ENST00000477152 A0A096LPK6 155 aa6.6□□□□□ -1.35
BRCA1-214ENST00000477152 GLOD5A6NK44 160 aa6.6□□□□□ -1.35
BRCA1-214ENST00000477152 CLCA1A8K7I4 914 aa6.6□□□□□ -1.35
BRCA1-214ENST00000477152 STX16-NPEPL1H3BU86 382 aa6.6□□□□□ -1.35
BRCA1-214ENST00000477152 STX16O14662 325 aa6.6□□□□□ -1.35
BRCA1-214ENST00000477152 ZNF354AO60765 605 aaPredicted RBP6.6□□□□□ -1.35
BRCA1-214ENST00000477152 RCBTB2O95199 551 aa6.6□□□□□ -1.35
BRCA1-214ENST00000477152 ESRRBO95718 433 aa6.6□□□□□ -1.35
BRCA1-214ENST00000477152 OTCP00480 354 aa6.6□□□□□ -1.35
BRCA1-214ENST00000477152 BMP7P18075 431 aa6.6□□□□□ -1.35
BRCA1-214ENST00000477152 CNTFP26441 200 aa6.6□□□□□ -1.35
BRCA1-214ENST00000477152 ABCD3P28288 659 aa6.6□□□□□ -1.35
BRCA1-214ENST00000477152 GSTM5P46439 218 aa6.6□□□□□ -1.35
BRCA1-214ENST00000477152 PCYT1AP49585 367 aa6.6□□□□□ -1.35
BRCA1-214ENST00000477152 SERPINB9P50453 376 aa6.6□□□□□ -1.35
BRCA1-214ENST00000477152 ZNF136P52737 540 aa6.6□□□□□ -1.35
BRCA1-214ENST00000477152 FOXD4Q12950 439 aaPredicted RBP6.6□□□□□ -1.35
BRCA1-214ENST00000477152 UAP1Q16222 522 aaPredicted RBP6.6□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms