RNA–Protein interactions for RNA: ENST00000476217.5

SSR3-206, Transcript of signal sequence receptor subunit 3, humanhuman

TSL 3 BASIC

Gene SSR3, Length 807 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR3-206ENST00000476217 ZSCAN26Q16670 478 aa4.89□□□□□ -1.63
SSR3-206ENST00000476217 CCSMST1Q4G0I0 132 aa4.89□□□□□ -1.63
SSR3-206ENST00000476217 LYSMD4Q5XG99 296 aa4.89□□□□□ -1.63
SSR3-206ENST00000476217 CAPN13Q6MZZ7 669 aaPredicted RBP4.89□□□□□ -1.63
SSR3-206ENST00000476217 TMEM81Q6P7N7 255 aa4.89□□□□□ -1.63
SSR3-206ENST00000476217 CREB3L2Q70SY1 520 aa4.89□□□□□ -1.63
SSR3-206ENST00000476217 TAF8Q7Z7C8 310 aa4.89□□□□□ -1.63
SSR3-206ENST00000476217 SYVN1Q86TM6 617 aa4.89□□□□□ -1.63
SSR3-206ENST00000476217 IQCHQ86VS3 1027 aa4.89□□□□□ -1.63
SSR3-206ENST00000476217 THOC6Q86W42 341 aaKnown RBP4.89□□□□□ -1.63
SSR3-206ENST00000476217 LONP2Q86WA8 852 aa4.89□□□□□ -1.63
SSR3-206ENST00000476217 LURAP1LQ8IV03 231 aa4.89□□□□□ -1.63
SSR3-206ENST00000476217 TBC1D21Q8IYX1 336 aa4.89□□□□□ -1.63
SSR3-206ENST00000476217 PPFIBP2Q8ND30 876 aa4.89□□□□□ -1.63
SSR3-206ENST00000476217 OR4F6Q8NGB9 312 aa4.89□□□□□ -1.63
SSR3-206ENST00000476217 OR52B6Q8NGF0 335 aa4.89□□□□□ -1.63
SSR3-206ENST00000476217 OR5K2Q8NHB8 316 aa4.89□□□□□ -1.63
SSR3-206ENST00000476217 CCL4L1Q8NHW4 92 aa4.89□□□□□ -1.63
SSR3-206ENST00000476217 NUDCD2Q8WVJ2 157 aa4.89□□□□□ -1.63
SSR3-206ENST00000476217 ADAMTS14Q8WXS8 1223 aa4.89□□□□□ -1.63
SSR3-206ENST00000476217 RAD51AP1Q96B01 352 aa4.89□□□□□ -1.63
SSR3-206ENST00000476217 CXorf40BQ96DE9 158 aa4.89□□□□□ -1.63
SSR3-206ENST00000476217 C19orf60Q96EN9 201 aa4.89□□□□□ -1.63
SSR3-206ENST00000476217 ZC3HAV1LQ96H79 300 aaKnown RBP4.89□□□□□ -1.63
SSR3-206ENST00000476217 KCNA7Q96RP8 456 aa4.89□□□□□ -1.63
SSR3-206ENST00000476217 ZNF382Q96SR6 550 aa4.89□□□□□ -1.63
SSR3-206ENST00000476217 RAB11FIP5Q9BXF6 653 aa4.89□□□□□ -1.63
SSR3-206ENST00000476217 GSDMCQ9BYG8 508 aa4.89□□□□□ -1.63
SSR3-206ENST00000476217 KRTAP1-5Q9BYS1 174 aa4.89□□□□□ -1.63
SSR3-206ENST00000476217 NUF2Q9BZD4 464 aa4.89□□□□□ -1.63
SSR3-206ENST00000476217 ACTR8Q9H981 624 aa4.89□□□□□ -1.63
SSR3-206ENST00000476217 TCF7L2Q9NQB0 619 aa4.89□□□□□ -1.63
SSR3-206ENST00000476217 PFDN4Q9NQP4 134 aa4.89□□□□□ -1.63
SSR3-206ENST00000476217 CCDC177Q9NQR7 707 aaPredicted RBP4.89□□□□□ -1.63
SSR3-206ENST00000476217 SPATA7Q9P0W8 599 aa4.89□□□□□ -1.63
SSR3-206ENST00000476217 TBC1D29Q9UFV1 150 aa4.89□□□□□ -1.63
SSR3-206ENST00000476217 POLG2Q9UHN1 485 aa4.89□□□□□ -1.63
SSR3-206ENST00000476217 LNPEPQ9UIQ6 1025 aa4.89□□□□□ -1.63
SSR3-206ENST00000476217 HAO1Q9UJM8 370 aa4.89□□□□□ -1.63
SSR3-206ENST00000476217 PRDM4Q9UKN5 801 aa4.89□□□□□ -1.63
SSR3-206ENST00000476217 SLC22A14Q9Y267 594 aa4.89□□□□□ -1.63
SSR3-206ENST00000476217 WDR37Q9Y2I8 494 aa4.89□□□□□ -1.63
SSR3-206ENST00000476217 SLCO1B1Q9Y6L6 691 aa4.89□□□□□ -1.63
SSR3-206ENST00000476217 COLEC10Q9Y6Z7 277 aa4.89□□□□□ -1.63
SSR3-206ENST00000476217 ATXN2Q99700 1313 aaKnown RBP4.89□□□□□ -1.63
SSR3-206ENST00000476217 ZFC3H1O60293 1989 aaKnown RBP4.89□□□□□ -1.63
SSR3-206ENST00000476217 EML5Q05BV3 1969 aa4.89□□□□□ -1.63
SSR3-206ENST00000476217 SPTBN5Q9NRC6 3674 aaKnown RBP4.88□□□□□ -1.63
SSR3-206ENST00000476217 CEP192Q8TEP8 1941 aa4.88□□□□□ -1.63
SSR3-206ENST00000476217 GOLGA8QA0A0J9YX86 632 aa4.88□□□□□ -1.63
SSR3-206ENST00000476217 A0A1W2PR77 199 aa4.88□□□□□ -1.63
SSR3-206ENST00000476217 GOLGA8OA6NCC3 632 aa4.88□□□□□ -1.63
SSR3-206ENST00000476217 E9PBE3 544 aa4.88□□□□□ -1.63
SSR3-206ENST00000476217 GOLGA8NF8WBI6 632 aa4.88□□□□□ -1.63
SSR3-206ENST00000476217 TLR4O00206 839 aa4.88□□□□□ -1.63
SSR3-206ENST00000476217 TAF4O00268 1085 aa4.88□□□□□ -1.63
SSR3-206ENST00000476217 OR7A17O14581 309 aa4.88□□□□□ -1.63
SSR3-206ENST00000476217 VILLO15195 856 aa4.88□□□□□ -1.63
SSR3-206ENST00000476217 BCAT2O15382 392 aaPredicted RBP4.88□□□□□ -1.63
SSR3-206ENST00000476217 KLHL41O60662 606 aa4.88□□□□□ -1.63
SSR3-206ENST00000476217 CCDC22O60826 627 aa4.88□□□□□ -1.63
SSR3-206ENST00000476217 CLDN9O95484 217 aa4.88□□□□□ -1.63
SSR3-206ENST00000476217 CAPN1P07384 714 aa4.88□□□□□ -1.63
SSR3-206ENST00000476217 UROSP10746 265 aa4.88□□□□□ -1.63
SSR3-206ENST00000476217 F3P13726 295 aa4.88□□□□□ -1.63
SSR3-206ENST00000476217 COX7A2P14406 83 aa4.88□□□□□ -1.63
SSR3-206ENST00000476217 GNSP15586 552 aa4.88□□□□□ -1.63
SSR3-206ENST00000476217 GNAZP19086 355 aa4.88□□□□□ -1.63
SSR3-206ENST00000476217 NCF2P19878 526 aaPredicted RBP4.88□□□□□ -1.63
SSR3-206ENST00000476217 PRDX3P30048 256 aaKnown RBP4.88□□□□□ -1.63
SSR3-206ENST00000476217 HSD17B2P37059 387 aa4.88□□□□□ -1.63
SSR3-206ENST00000476217 SLC6A12P48065 614 aa4.88□□□□□ -1.63
SSR3-206ENST00000476217 CSNK1EP49674 416 aaKnown RBP4.88□□□□□ -1.63
SSR3-206ENST00000476217 FOXA1P55317 472 aa4.88□□□□□ -1.63
SSR3-206ENST00000476217 ERVPABLB-1P60509 514 aa4.88□□□□□ -1.63
SSR3-206ENST00000476217 IRF8Q02556 426 aa4.88□□□□□ -1.63
SSR3-206ENST00000476217 TRAF3Q13114 568 aa4.88□□□□□ -1.63
SSR3-206ENST00000476217 SRSF5Q13243 272 aaKnown RBP4.88□□□□□ -1.63
SSR3-206ENST00000476217 ITGADQ13349 1161 aa4.88□□□□□ -1.63
SSR3-206ENST00000476217 C1orf61Q13536 156 aa4.88□□□□□ -1.63
SSR3-206ENST00000476217 ARHGAP19Q14CB8 494 aa4.88□□□□□ -1.63
SSR3-206ENST00000476217 ELOCQ15369 112 aa4.88□□□□□ -1.63
SSR3-206ENST00000476217 IMPG1Q17R60 797 aa4.88□□□□□ -1.63
SSR3-206ENST00000476217 SLC9B1Q4ZJI4 515 aa4.88□□□□□ -1.63
SSR3-206ENST00000476217 XKR6Q5GH73 641 aa4.88□□□□□ -1.63
SSR3-206ENST00000476217 RUSC1-AS1Q66K80 236 aa4.88□□□□□ -1.63
SSR3-206ENST00000476217 ZNF324BQ6AW86 544 aaPredicted RBP4.88□□□□□ -1.63
SSR3-206ENST00000476217 CAPRIN2Q6IMN6 1127 aaKnown RBP4.88□□□□□ -1.63
SSR3-206ENST00000476217 TYW3Q6IPR3 259 aaKnown RBP4.88□□□□□ -1.63
SSR3-206ENST00000476217 EPGNQ6UW88 154 aa4.88□□□□□ -1.63
SSR3-206ENST00000476217 IL27RAQ6UWB1 636 aa4.88□□□□□ -1.63
SSR3-206ENST00000476217 SUSD1Q6UWL2 747 aa4.88□□□□□ -1.63
SSR3-206ENST00000476217 ABRAXAS1Q6UWZ7 409 aa4.88□□□□□ -1.63
SSR3-206ENST00000476217 CCDC121Q6ZUS5 278 aa4.88□□□□□ -1.63
SSR3-206ENST00000476217 MOB3CQ70IA8 216 aa4.88□□□□□ -1.63
SSR3-206ENST00000476217 TRPM8Q7Z2W7 1104 aa4.88□□□□□ -1.63
SSR3-206ENST00000476217 TMPRSS11BQ86T26 416 aa4.88□□□□□ -1.63
SSR3-206ENST00000476217 GKN2Q86XP6 184 aa4.88□□□□□ -1.63
SSR3-206ENST00000476217 CLYBLQ8N0X4 340 aa4.88□□□□□ -1.63
SSR3-206ENST00000476217 C2orf73Q8N5S3 287 aaPredicted RBP4.88□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms