RNA–Protein interactions for RNA: ENST00000476169.1

VPS13D-207, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

TSL 3

Gene VPS13D, Length 475 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-207ENST00000476169 OR4D5Q8NGN0 318 aa3.67□□□□□ -1.82
VPS13D-207ENST00000476169 OR5M9Q8NGP3 310 aa3.67□□□□□ -1.82
VPS13D-207ENST00000476169 C8orf46Q8TAG6 207 aa3.67□□□□□ -1.82
VPS13D-207ENST00000476169 FBXO25Q8TCJ0 367 aa3.67□□□□□ -1.82
VPS13D-207ENST00000476169 SCFD1Q8WVM8 642 aa3.67□□□□□ -1.82
VPS13D-207ENST00000476169 SECTM1Q8WVN6 248 aa3.67□□□□□ -1.82
VPS13D-207ENST00000476169 MAIP1Q8WWC4 291 aa3.67□□□□□ -1.82
VPS13D-207ENST00000476169 C18orf25Q96B23 403 aaPredicted RBP3.67□□□□□ -1.82
VPS13D-207ENST00000476169 OMA1Q96E52 524 aa3.67□□□□□ -1.82
VPS13D-207ENST00000476169 MED30Q96HR3 178 aa3.67□□□□□ -1.82
VPS13D-207ENST00000476169 IL17FQ96PD4 163 aa3.67□□□□□ -1.82
VPS13D-207ENST00000476169 LRRC1Q9BTT6 524 aa3.67□□□□□ -1.82
VPS13D-207ENST00000476169 STRADBQ9C0K7 418 aa3.67□□□□□ -1.82
VPS13D-207ENST00000476169 NXF5Q9H1B4 397 aaKnown RBP3.67□□□□□ -1.82
VPS13D-207ENST00000476169 GLT8D2Q9H1C3 349 aa3.67□□□□□ -1.82
VPS13D-207ENST00000476169 BICC1Q9H694 974 aaKnown RBP3.67□□□□□ -1.82
VPS13D-207ENST00000476169 VCPKMTQ9H867 229 aa3.67□□□□□ -1.82
VPS13D-207ENST00000476169 FAM120CQ9NX05 1096 aaKnown RBP3.67□□□□□ -1.82
VPS13D-207ENST00000476169 DUS2Q9NX74 493 aaKnown RBP3.67□□□□□ -1.82
VPS13D-207ENST00000476169 NLGN3Q9NZ94 848 aa3.67□□□□□ -1.82
VPS13D-207ENST00000476169 PPP2R2CQ9Y2T4 447 aa3.67□□□□□ -1.82
VPS13D-207ENST00000476169 MEMO1Q9Y316 297 aa3.67□□□□□ -1.82
VPS13D-207ENST00000476169 NPTNQ9Y639 398 aa3.67□□□□□ -1.82
VPS13D-207ENST00000476169 PTPRUQ92729 1446 aa3.67□□□□□ -1.82
VPS13D-207ENST00000476169 AFF2P51816 1311 aa3.67□□□□□ -1.82
VPS13D-207ENST00000476169 TRIP12Q14669 1992 aaPredicted RBP3.66□□□□□ -1.82
VPS13D-207ENST00000476169 hCG_38984A0A1B0GV85 526 aa3.66□□□□□ -1.82
VPS13D-207ENST00000476169 LOC390937A0A1W2PQ73 354 aa3.66□□□□□ -1.82
VPS13D-207ENST00000476169 C9JVG2 144 aa3.66□□□□□ -1.82
VPS13D-207ENST00000476169 GOLGA8TH3BQL2 631 aa3.66□□□□□ -1.82
VPS13D-207ENST00000476169 KIF2AO00139 706 aaPredicted RBP3.66□□□□□ -1.82
VPS13D-207ENST00000476169 BTN3A3O00478 584 aa3.66□□□□□ -1.82
VPS13D-207ENST00000476169 IMPA2O14732 288 aa3.66□□□□□ -1.82
VPS13D-207ENST00000476169 NBR2O15453 112 aa3.66□□□□□ -1.82
VPS13D-207ENST00000476169 LGI1O95970 557 aa3.66□□□□□ -1.82
VPS13D-207ENST00000476169 OTCP00480 354 aa3.66□□□□□ -1.82
VPS13D-207ENST00000476169 CSTAP01040 98 aa3.66□□□□□ -1.82
VPS13D-207ENST00000476169 NPPAP01160 153 aa3.66□□□□□ -1.82
VPS13D-207ENST00000476169 UBTFL6P0CB48 400 aaPredicted RBP3.66□□□□□ -1.82
VPS13D-207ENST00000476169 FAM157CP0CG43 387 aa3.66□□□□□ -1.82
VPS13D-207ENST00000476169 ADORA3P0DMS8 318 aa3.66□□□□□ -1.82
VPS13D-207ENST00000476169 SLC2A2P11168 524 aaPredicted RBP3.66□□□□□ -1.82
VPS13D-207ENST00000476169 HOXD10P28358 340 aa3.66□□□□□ -1.82
VPS13D-207ENST00000476169 LONP1P36776 959 aaKnown RBP3.66□□□□□ -1.82
VPS13D-207ENST00000476169 SLC1A4P43007 532 aa3.66□□□□□ -1.82
VPS13D-207ENST00000476169 HOXA1P49639 335 aaPredicted RBP3.66□□□□□ -1.82
VPS13D-207ENST00000476169 CASP4P49662 377 aa3.66□□□□□ -1.82
VPS13D-207ENST00000476169 C21orf59P57076 290 aa3.66□□□□□ -1.82
VPS13D-207ENST00000476169 CDR2Q01850 454 aa3.66□□□□□ -1.82
VPS13D-207ENST00000476169 POU3F1Q03052 451 aaPredicted RBP3.66□□□□□ -1.82
VPS13D-207ENST00000476169 GAGE5Q13069 117 aa3.66□□□□□ -1.82
VPS13D-207ENST00000476169 GAGE6Q13070 117 aa3.66□□□□□ -1.82
VPS13D-207ENST00000476169 ALKBH6Q3KRA9 238 aa3.66□□□□□ -1.82
VPS13D-207ENST00000476169 XKR6Q5GH73 641 aa3.66□□□□□ -1.82
VPS13D-207ENST00000476169 OR4F3Q6IEY1 312 aa3.66□□□□□ -1.82
VPS13D-207ENST00000476169 UQCC3Q6UW78 93 aa3.66□□□□□ -1.82
VPS13D-207ENST00000476169 TMEM107Q6UX40 140 aa3.66□□□□□ -1.82
VPS13D-207ENST00000476169 VITQ6UXI7 678 aa3.66□□□□□ -1.82
VPS13D-207ENST00000476169 ZNF852Q6ZMS4 543 aa3.66□□□□□ -1.82
VPS13D-207ENST00000476169 LANCL3Q6ZV70 420 aa3.66□□□□□ -1.82
VPS13D-207ENST00000476169 TUBA1AQ71U36 451 aa3.66□□□□□ -1.82
VPS13D-207ENST00000476169 UTS2BQ765I0 119 aa3.66□□□□□ -1.82
VPS13D-207ENST00000476169 CLEC4FQ8N1N0 589 aa3.66□□□□□ -1.82
VPS13D-207ENST00000476169 SPERTQ8NA61 448 aa3.66□□□□□ -1.82
VPS13D-207ENST00000476169 FAM83FQ8NEG4 500 aaPredicted RBP3.66□□□□□ -1.82
VPS13D-207ENST00000476169 MNS1Q8NEH6 495 aa3.66□□□□□ -1.82
VPS13D-207ENST00000476169 OR4F17Q8NGA8 305 aa3.66□□□□□ -1.82
VPS13D-207ENST00000476169 OR4F5Q8NH21 305 aa3.66□□□□□ -1.82
VPS13D-207ENST00000476169 OR4C3Q8NH37 302 aa3.66□□□□□ -1.82
VPS13D-207ENST00000476169 OR8K3Q8NH51 312 aa3.66□□□□□ -1.82
VPS13D-207ENST00000476169 RPLP0P6Q8NHW5 317 aa3.66□□□□□ -1.82
VPS13D-207ENST00000476169 CNIH3Q8TBE1 160 aa3.66□□□□□ -1.82
VPS13D-207ENST00000476169 NANPQ8TBE9 248 aa3.66□□□□□ -1.82
VPS13D-207ENST00000476169 ST8SIA1Q92185 356 aa3.66□□□□□ -1.82
VPS13D-207ENST00000476169 FAM3CQ92520 227 aa3.66□□□□□ -1.82
VPS13D-207ENST00000476169 HAVCR1Q96D42 359 aa3.66□□□□□ -1.82
VPS13D-207ENST00000476169 PELI1Q96FA3 418 aa3.66□□□□□ -1.82
VPS13D-207ENST00000476169 SDSLQ96GA7 329 aa3.66□□□□□ -1.82
VPS13D-207ENST00000476169 LMLNQ96KR4 655 aa3.66□□□□□ -1.82
VPS13D-207ENST00000476169 C7orf34Q96L11 122 aa3.66□□□□□ -1.82
VPS13D-207ENST00000476169 OR4F4Q96R69 305 aa3.66□□□□□ -1.82
VPS13D-207ENST00000476169 NKX3-1Q99801 234 aaPredicted RBP3.66□□□□□ -1.82
VPS13D-207ENST00000476169 TUBA1CQ9BQE3 449 aa3.66□□□□□ -1.82
VPS13D-207ENST00000476169 TTYH2Q9BSA4 534 aa3.66□□□□□ -1.82
VPS13D-207ENST00000476169 RPP25Q9BUL9 199 aaKnown RBP3.66□□□□□ -1.82
VPS13D-207ENST00000476169 AUNIPQ9H7T9 357 aa3.66□□□□□ -1.82
VPS13D-207ENST00000476169 ANKRA2Q9H9E1 313 aa3.66□□□□□ -1.82
VPS13D-207ENST00000476169 CYP3A43Q9HB55 503 aa3.66□□□□□ -1.82
VPS13D-207ENST00000476169 NRN1Q9NPD7 142 aa3.66□□□□□ -1.82
VPS13D-207ENST00000476169 DCAF13Q9NV06 445 aaKnown RBP3.66□□□□□ -1.82
VPS13D-207ENST00000476169 PDP1Q9P0J1 537 aaPredicted RBP3.66□□□□□ -1.82
VPS13D-207ENST00000476169 EIF3KQ9UBQ5 218 aaKnown RBP3.66□□□□□ -1.82
VPS13D-207ENST00000476169 CA5BQ9Y2D0 317 aa3.66□□□□□ -1.82
VPS13D-207ENST00000476169 PLB1Q6P1J6 1458 aa3.66□□□□□ -1.82
VPS13D-207ENST00000476169 FHOD3Q2V2M9 1422 aa3.65□□□□□ -1.83
VPS13D-207ENST00000476169 A0A1W2PS18 150 aa3.65□□□□□ -1.83
VPS13D-207ENST00000476169 PLSCR5A0PG75 271 aa3.65□□□□□ -1.83
VPS13D-207ENST00000476169 LRIT2A6NDA9 550 aa3.65□□□□□ -1.83
VPS13D-207ENST00000476169 OR5H15A6NDH6 313 aa3.65□□□□□ -1.83
VPS13D-207ENST00000476169 NKX6-3A6NJ46 265 aa3.65□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 51.3 ms