RNA–Protein interactions for RNA: ENST00000475549.1

HDAC3-207, Transcript of histone deacetylase 3, humanhuman

TSL 2

Gene HDAC3, Length 297 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-207ENST00000475549 MAP3K8P41279 467 aa6.34□□□□□ -1.39
HDAC3-207ENST00000475549 KIR2DL2P43627 348 aaPredicted RBP6.34□□□□□ -1.39
HDAC3-207ENST00000475549 NCBP2P52298 156 aaKnown RBP eCLIP6.34□□□□□ -1.39
HDAC3-207ENST00000475549 CLDN20P56880 219 aa6.34□□□□□ -1.39
HDAC3-207ENST00000475549 SORDQ00796 357 aa6.34□□□□□ -1.39
HDAC3-207ENST00000475549 EFR3AQ14156 821 aa6.34□□□□□ -1.39
HDAC3-207ENST00000475549 RCAN2Q14206 197 aa6.34□□□□□ -1.39
HDAC3-207ENST00000475549 POU4F3Q15319 338 aa6.34□□□□□ -1.39
HDAC3-207ENST00000475549 BCL2A1Q16548 175 aa6.34□□□□□ -1.39
HDAC3-207ENST00000475549 CYP27C1Q4G0S4 372 aa6.34□□□□□ -1.39
HDAC3-207ENST00000475549 SPDYAQ5MJ70 313 aa6.34□□□□□ -1.39
HDAC3-207ENST00000475549 CLEC6AQ6EIG7 209 aa6.34□□□□□ -1.39
HDAC3-207ENST00000475549 ANKRD26P1Q6NSI1 321 aa6.34□□□□□ -1.39
HDAC3-207ENST00000475549 NOXRED1Q6NXP6 359 aa6.34□□□□□ -1.39
HDAC3-207ENST00000475549 ENPP6Q6UWR7 440 aa6.34□□□□□ -1.39
HDAC3-207ENST00000475549 PAMR1Q6UXH9 720 aa6.34□□□□□ -1.39
HDAC3-207ENST00000475549 Q6ZSR9 355 aa6.34□□□□□ -1.39
HDAC3-207ENST00000475549 FRMD7Q6ZUT3 714 aa6.34□□□□□ -1.39
HDAC3-207ENST00000475549 ZNF551Q7Z340 670 aaPredicted RBP6.34□□□□□ -1.39
HDAC3-207ENST00000475549 BTLAQ7Z6A9 289 aa6.34□□□□□ -1.39
HDAC3-207ENST00000475549 EXOC3L1Q86VI1 746 aa6.34□□□□□ -1.39
HDAC3-207ENST00000475549 KIF18BQ86Y91 864 aa6.34□□□□□ -1.39
HDAC3-207ENST00000475549 SLC22A9Q8IVM8 553 aa6.34□□□□□ -1.39
HDAC3-207ENST00000475549 IFT20Q8IY31 132 aa6.34□□□□□ -1.39
HDAC3-207ENST00000475549 FAM9CQ8IZT9 166 aa6.34□□□□□ -1.39
HDAC3-207ENST00000475549 OR2M3Q8NG83 312 aa6.34□□□□□ -1.39
HDAC3-207ENST00000475549 OR2T11Q8NH01 316 aa6.34□□□□□ -1.39
HDAC3-207ENST00000475549 GOT1L1Q8NHS2 421 aaPredicted RBP6.34□□□□□ -1.39
HDAC3-207ENST00000475549 DUSP19Q8WTR2 217 aa6.34□□□□□ -1.39
HDAC3-207ENST00000475549 FIG4Q92562 907 aa6.34□□□□□ -1.39
HDAC3-207ENST00000475549 ELP4Q96EB1 424 aa6.34□□□□□ -1.39
HDAC3-207ENST00000475549 ZNF845Q96IR2 970 aaPredicted RBP6.34□□□□□ -1.39
HDAC3-207ENST00000475549 SFXN2Q96NB2 322 aa6.34□□□□□ -1.39
HDAC3-207ENST00000475549 WFIKKN1Q96NZ8 548 aa6.34□□□□□ -1.39
HDAC3-207ENST00000475549 ALPK1Q96QP1 1244 aa6.34□□□□□ -1.39
HDAC3-207ENST00000475549 BBS4Q96RK4 519 aa6.34□□□□□ -1.39
HDAC3-207ENST00000475549 NPAS1Q99742 590 aa6.34□□□□□ -1.39
HDAC3-207ENST00000475549 SMR3AQ99954 134 aa6.34□□□□□ -1.39
HDAC3-207ENST00000475549 KLHDC3Q9BQ90 382 aa6.34□□□□□ -1.39
HDAC3-207ENST00000475549 RHOXF2Q9BQY4 288 aa6.34□□□□□ -1.39
HDAC3-207ENST00000475549 LMF2Q9BU23 707 aaKnown RBP6.34□□□□□ -1.39
HDAC3-207ENST00000475549 SFXN3Q9BWM7 321 aa6.34□□□□□ -1.39
HDAC3-207ENST00000475549 RBM24Q9BX46 236 aaKnown RBP6.34□□□□□ -1.39
HDAC3-207ENST00000475549 SHCBP1LQ9BZQ2 653 aa6.34□□□□□ -1.39
HDAC3-207ENST00000475549 DSN1Q9H410 356 aa6.34□□□□□ -1.39
HDAC3-207ENST00000475549 TUBB1Q9H4B7 451 aa6.34□□□□□ -1.39
HDAC3-207ENST00000475549 MYNNQ9NPC7 610 aa6.34□□□□□ -1.39
HDAC3-207ENST00000475549 PFDN4Q9NQP4 134 aa6.34□□□□□ -1.39
HDAC3-207ENST00000475549 OXSMQ9NWU1 459 aa6.34□□□□□ -1.39
HDAC3-207ENST00000475549 TAS2R9Q9NYW1 312 aa6.34□□□□□ -1.39
HDAC3-207ENST00000475549 PSMC3IPQ9P2W1 217 aaPredicted RBP6.34□□□□□ -1.39
HDAC3-207ENST00000475549 MED12Q93074 2177 aa6.34□□□□□ -1.4
HDAC3-207ENST00000475549 GIMAP1-GIMAP5A0A087WTJ2 511 aa6.33□□□□□ -1.4
HDAC3-207ENST00000475549 DEFB108AA8MXU0 73 aa6.33□□□□□ -1.4
HDAC3-207ENST00000475549 SHISA8B8ZZ34 492 aa6.33□□□□□ -1.4
HDAC3-207ENST00000475549 SCO2O43819 266 aa6.33□□□□□ -1.4
HDAC3-207ENST00000475549 RSL1D1O76021 490 aaKnown RBP6.33□□□□□ -1.4
HDAC3-207ENST00000475549 IL33O95760 270 aa6.33□□□□□ -1.4
HDAC3-207ENST00000475549 RAF1P04049 648 aa6.33□□□□□ -1.4
HDAC3-207ENST00000475549 CD53P19397 219 aa6.33□□□□□ -1.4
HDAC3-207ENST00000475549 DNASE1P24855 282 aa6.33□□□□□ -1.4
HDAC3-207ENST00000475549 IL12BP29460 328 aa6.33□□□□□ -1.4
HDAC3-207ENST00000475549 GABRA3P34903 492 aa6.33□□□□□ -1.4
HDAC3-207ENST00000475549 CRHR1P34998 444 aa6.33□□□□□ -1.4
HDAC3-207ENST00000475549 GSTM5P46439 218 aa6.33□□□□□ -1.4
HDAC3-207ENST00000475549 DSCR4P56555 118 aaPredicted RBP6.33□□□□□ -1.4
HDAC3-207ENST00000475549 DNAJB13P59910 316 aa6.33□□□□□ -1.4
HDAC3-207ENST00000475549 ZNF763Q0D2J5 394 aa6.33□□□□□ -1.4
HDAC3-207ENST00000475549 GUSBP1Q15486 140 aa6.33□□□□□ -1.4
HDAC3-207ENST00000475549 ERCC6LQ2NKX8 1250 aa6.33□□□□□ -1.4
HDAC3-207ENST00000475549 TMEM44Q2T9K0 475 aa6.33□□□□□ -1.4
HDAC3-207ENST00000475549 DEFB113Q30KQ7 82 aa6.33□□□□□ -1.4
HDAC3-207ENST00000475549 KRTAP21-3Q3LHN1 58 aa6.33□□□□□ -1.4
HDAC3-207ENST00000475549 UGT3A2Q3SY77 523 aa6.33□□□□□ -1.4
HDAC3-207ENST00000475549 ZNF385BQ569K4 471 aa6.33□□□□□ -1.4
HDAC3-207ENST00000475549 SH2D4BQ5SQS7 431 aa6.33□□□□□ -1.4
HDAC3-207ENST00000475549 VWA1Q6PCB0 445 aa6.33□□□□□ -1.4
HDAC3-207ENST00000475549 AAGABQ6PD74 315 aa6.33□□□□□ -1.4
HDAC3-207ENST00000475549 CAMKMTQ7Z624 323 aa6.33□□□□□ -1.4
HDAC3-207ENST00000475549 ZAR1Q86SH2 424 aa6.33□□□□□ -1.4
HDAC3-207ENST00000475549 CXorf67Q86X51 503 aaPredicted RBP6.33□□□□□ -1.4
HDAC3-207ENST00000475549 C10orf107Q8IVU9 208 aa6.33□□□□□ -1.4
HDAC3-207ENST00000475549 SAMD14Q8IZD0 417 aaPredicted RBP6.33□□□□□ -1.4
HDAC3-207ENST00000475549 CHDHQ8NE62 594 aaPredicted RBP6.33□□□□□ -1.4
HDAC3-207ENST00000475549 OR4C3Q8NH37 302 aa6.33□□□□□ -1.4
HDAC3-207ENST00000475549 CDC26Q8NHZ8 85 aa6.33□□□□□ -1.4
HDAC3-207ENST00000475549 NUDT8Q8WV74 236 aa6.33□□□□□ -1.4
HDAC3-207ENST00000475549 PIK3R3Q92569 461 aa6.33□□□□□ -1.4
HDAC3-207ENST00000475549 HOXB13Q92826 284 aaPredicted RBP6.33□□□□□ -1.4
HDAC3-207ENST00000475549 GFM2Q969S9 779 aaKnown RBP6.33□□□□□ -1.4
HDAC3-207ENST00000475549 CIDECQ96AQ7 238 aaPredicted RBP6.33□□□□□ -1.4
HDAC3-207ENST00000475549 ZNF524Q96C55 264 aa6.33□□□□□ -1.4
HDAC3-207ENST00000475549 C1GALT1C1Q96EU7 318 aa6.33□□□□□ -1.4
HDAC3-207ENST00000475549 GIMAP5Q96F15 307 aa6.33□□□□□ -1.4
HDAC3-207ENST00000475549 ZFP3Q96NJ6 502 aa6.33□□□□□ -1.4
HDAC3-207ENST00000475549 DACH2Q96NX9 599 aa6.33□□□□□ -1.4
HDAC3-207ENST00000475549 STMN4Q9H169 189 aaPredicted RBP6.33□□□□□ -1.4
HDAC3-207ENST00000475549 OPN3Q9H1Y3 402 aaPredicted RBP6.33□□□□□ -1.4
HDAC3-207ENST00000475549 PIGMQ9H3S5 423 aa6.33□□□□□ -1.4
HDAC3-207ENST00000475549 FBXO34Q9NWN3 711 aa6.33□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms