RNA–Protein interactions for RNA: ENST00000475243.5

VAPB-204, Transcript of VAMP associated protein B and C, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VAPB, Length 7,936 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPB-204ENST00000475243 GJB3O75712 270 aa10.38□□□□□ -0.75
VAPB-204ENST00000475243 IL4RP24394 825 aa10.38□□□□□ -0.75
VAPB-204ENST00000475243 PBX2P40425 430 aa10.38□□□□□ -0.75
VAPB-204ENST00000475243 UNQ6126/PRO20091Q6UXV3 157 aa10.38□□□□□ -0.75
VAPB-204ENST00000475243 RELL1Q8IUW5 271 aa10.38□□□□□ -0.75
VAPB-204ENST00000475243 ARHGAP12Q8IWW6 846 aa10.38□□□□□ -0.75
VAPB-204ENST00000475243 OR9K2Q8NGE7 335 aa10.38□□□□□ -0.75
VAPB-204ENST00000475243 SLC45A3Q96JT2 553 aa10.38□□□□□ -0.75
VAPB-204ENST00000475243 ATG2BQ96BY7 2078 aa10.38□□□□□ -0.75
VAPB-204ENST00000475243 FTCDNL1E5RQL4 147 aa10.38□□□□□ -0.75
VAPB-204ENST00000475243 ZNF217O75362 1048 aa10.38□□□□□ -0.75
VAPB-204ENST00000475243 CRTAPO75718 401 aaPredicted RBP10.38□□□□□ -0.75
VAPB-204ENST00000475243 ZNF14P17017 642 aaPredicted RBP10.38□□□□□ -0.75
VAPB-204ENST00000475243 SGSHP51688 502 aa10.38□□□□□ -0.75
VAPB-204ENST00000475243 PRKXP51817 358 aa10.38□□□□□ -0.75
VAPB-204ENST00000475243 RAB15P59190 212 aa10.38□□□□□ -0.75
VAPB-204ENST00000475243 ZNF440Q8IYI8 595 aa10.38□□□□□ -0.75
VAPB-204ENST00000475243 RNF175Q8N4F7 328 aa10.38□□□□□ -0.75
VAPB-204ENST00000475243 OR5H2Q8NGV7 314 aa10.38□□□□□ -0.75
VAPB-204ENST00000475243 ZNF420Q8TAQ5 688 aaPredicted RBP10.38□□□□□ -0.75
VAPB-204ENST00000475243 MAP3K3Q99759 626 aa10.38□□□□□ -0.75
VAPB-204ENST00000475243 ZFYVE21Q9BQ24 234 aa10.38□□□□□ -0.75
VAPB-204ENST00000475243 HERPUD2Q9BSE4 406 aa10.38□□□□□ -0.75
VAPB-204ENST00000475243 APOOQ9BUR5 198 aa10.38□□□□□ -0.75
VAPB-204ENST00000475243 SMOXQ9NWM0 555 aa10.38□□□□□ -0.75
VAPB-204ENST00000475243 CAPNS1P04632 268 aa10.38□□□□□ -0.75
VAPB-204ENST00000475243 RAB3BP20337 219 aa10.38□□□□□ -0.75
VAPB-204ENST00000475243 ITGB8P26012 769 aa10.38□□□□□ -0.75
VAPB-204ENST00000475243 MAMDC4Q6UXC1 1216 aa10.38□□□□□ -0.75
VAPB-204ENST00000475243 MFSD6LQ8IWD5 586 aa10.38□□□□□ -0.75
VAPB-204ENST00000475243 ARL14Q8N4G2 192 aa10.38□□□□□ -0.75
VAPB-204ENST00000475243 FAM46BQ96A09 425 aa10.38□□□□□ -0.75
VAPB-204ENST00000475243 DPCDQ9BVM2 203 aaPredicted RBP10.38□□□□□ -0.75
VAPB-204ENST00000475243 KCNIP1Q9NZI2 227 aa10.38□□□□□ -0.75
VAPB-204ENST00000475243 DCDC2BA2VCK2 349 aa10.38□□□□□ -0.75
VAPB-204ENST00000475243 CDC14CA4D256 554 aa10.38□□□□□ -0.75
VAPB-204ENST00000475243 DNASE1P24855 282 aa10.38□□□□□ -0.75
VAPB-204ENST00000475243 PITPNBP48739 271 aa10.38□□□□□ -0.75
VAPB-204ENST00000475243 ARG2P78540 354 aa10.38□□□□□ -0.75
VAPB-204ENST00000475243 CEACAM7Q14002 265 aa10.38□□□□□ -0.75
VAPB-204ENST00000475243 PPA1Q15181 289 aa10.38□□□□□ -0.75
VAPB-204ENST00000475243 SLC5A8Q8N695 610 aa10.38□□□□□ -0.75
VAPB-204ENST00000475243 SOBPA7XYQ1 873 aa10.38□□□□□ -0.75
VAPB-204ENST00000475243 CREBL2O60519 120 aaPredicted RBP10.38□□□□□ -0.75
VAPB-204ENST00000475243 RDH16O75452 317 aa10.38□□□□□ -0.75
VAPB-204ENST00000475243 OXSR1O95747 527 aaPredicted RBP10.38□□□□□ -0.75
VAPB-204ENST00000475243 SLC10A3P09131 477 aa10.38□□□□□ -0.75
VAPB-204ENST00000475243 FOXA1P55317 472 aa10.38□□□□□ -0.75
VAPB-204ENST00000475243 CTC1Q2NKJ3 1217 aa10.38□□□□□ -0.75
VAPB-204ENST00000475243 OR7G3Q8NG95 312 aa10.38□□□□□ -0.75
VAPB-204ENST00000475243 TMEM246Q9BRR3 403 aa10.38□□□□□ -0.75
VAPB-204ENST00000475243 POTEKPQ9BYX7 375 aa10.38□□□□□ -0.75
VAPB-204ENST00000475243 ERVK-19Q9WJR5 959 aa10.38□□□□□ -0.75
VAPB-204ENST00000475243 B8ZZF3 427 aa10.38□□□□□ -0.75
VAPB-204ENST00000475243 E7ESA3 106 aa10.38□□□□□ -0.75
VAPB-204ENST00000475243 AMY2AP04746 511 aa10.38□□□□□ -0.75
VAPB-204ENST00000475243 CTSAP10619 480 aa10.38□□□□□ -0.75
VAPB-204ENST00000475243 SNRPD2P62316 118 aaKnown RBP10.38□□□□□ -0.75
VAPB-204ENST00000475243 RAB33AQ14088 237 aa10.38□□□□□ -0.75
VAPB-204ENST00000475243 EIF4HQ15056 248 aaKnown RBP10.38□□□□□ -0.75
VAPB-204ENST00000475243 OR7A5Q15622 319 aa10.38□□□□□ -0.75
VAPB-204ENST00000475243 NTRK2Q16620 822 aa10.38□□□□□ -0.75
VAPB-204ENST00000475243 GTDC1Q4AE62 458 aa10.38□□□□□ -0.75
VAPB-204ENST00000475243 TMEM205Q6UW68 189 aa10.38□□□□□ -0.75
VAPB-204ENST00000475243 ZC3H3Q8IXZ2 948 aaKnown RBP10.38□□□□□ -0.75
VAPB-204ENST00000475243 SNIP1Q8TAD8 396 aaKnown RBP10.38□□□□□ -0.75
VAPB-204ENST00000475243 RLN3Q8WXF3 142 aa10.38□□□□□ -0.75
VAPB-204ENST00000475243 ACTR10Q9NZ32 417 aa10.38□□□□□ -0.75
VAPB-204ENST00000475243 VSX1Q9NZR4 365 aaPredicted RBP10.38□□□□□ -0.75
VAPB-204ENST00000475243 AK6Q9Y3D8 172 aaKnown RBP10.38□□□□□ -0.75
VAPB-204ENST00000475243 SCN11AQ9UI33 1791 aa10.37□□□□□ -0.75
VAPB-204ENST00000475243 ZNF181Q2M3W8 571 aa10.37□□□□□ -0.75
VAPB-204ENST00000475243 TMIEQ8NEW7 156 aa10.37□□□□□ -0.75
VAPB-204ENST00000475243 NEIL2Q969S2 332 aa10.37□□□□□ -0.75
VAPB-204ENST00000475243 RRNAD1Q96FB5 475 aaKnown RBP10.37□□□□□ -0.75
VAPB-204ENST00000475243 AP1S3Q96PC3 154 aa10.37□□□□□ -0.75
VAPB-204ENST00000475243 GMLQ99445 158 aa10.37□□□□□ -0.75
VAPB-204ENST00000475243 FUNDC2Q9BWH2 189 aa10.37□□□□□ -0.75
VAPB-204ENST00000475243 MAGIXQ9H6Y5 334 aa10.37□□□□□ -0.75
VAPB-204ENST00000475243 PTRH2Q9Y3E5 179 aaKnown RBP10.37□□□□□ -0.75
VAPB-204ENST00000475243 TRIP11Q15643 1979 aa10.37□□□□□ -0.75
VAPB-204ENST00000475243 LOC102723532A0A0G2JNH3 316 aa10.37□□□□□ -0.75
VAPB-204ENST00000475243 GJE1A6NN92 205 aa10.37□□□□□ -0.75
VAPB-204ENST00000475243 H3BUI4 141 aa10.37□□□□□ -0.75
VAPB-204ENST00000475243 MPPED1O15442 326 aa10.37□□□□□ -0.75
VAPB-204ENST00000475243 CAPN3P20807 821 aa10.37□□□□□ -0.75
VAPB-204ENST00000475243 EIF2B1Q14232 305 aaKnown RBP10.37□□□□□ -0.75
VAPB-204ENST00000475243 SERPINA12Q8IW75 414 aa10.37□□□□□ -0.75
VAPB-204ENST00000475243 ZNF619Q8N2I2 560 aa10.37□□□□□ -0.75
VAPB-204ENST00000475243 IGSF5Q9NSI5 407 aa10.37□□□□□ -0.75
VAPB-204ENST00000475243 SUSD2Q9UGT4 822 aa10.37□□□□□ -0.75
VAPB-204ENST00000475243 RIMS3Q9UJD0 308 aa10.37□□□□□ -0.75
VAPB-204ENST00000475243 NAALAD2Q9Y3Q0 740 aa10.37□□□□□ -0.75
VAPB-204ENST00000475243 A0A0A6YYC8 382 aaPredicted RBP10.37□□□□□ -0.75
VAPB-204ENST00000475243 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP10.37□□□□□ -0.75
VAPB-204ENST00000475243 I3L1I5 382 aaPredicted RBP10.37□□□□□ -0.75
VAPB-204ENST00000475243 S100PP25815 95 aa10.37□□□□□ -0.75
VAPB-204ENST00000475243 PSPHP78330 225 aa10.37□□□□□ -0.75
VAPB-204ENST00000475243 DEFB103AP81534 67 aa10.37□□□□□ -0.75
VAPB-204ENST00000475243 UNC5DQ6UXZ4 953 aa10.37□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms