RNA–Protein interactions for RNA: ENST00000474887.5

DNMT3A-211, Transcript of DNA methyltransferase 3 alpha, humanhuman

TSL 3

Gene DNMT3A, Length 847 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3A-211ENST00000474887 H0Y3Z8 333 aa12.74□□□□□ -0.37
DNMT3A-211ENST00000474887 UPK1AO00322 258 aa12.74□□□□□ -0.37
DNMT3A-211ENST00000474887 FADS1O60427 444 aa12.74□□□□□ -0.37
DNMT3A-211ENST00000474887 ZIC3O60481 467 aa12.74□□□□□ -0.37
DNMT3A-211ENST00000474887 NPHS1O60500 1241 aa12.74□□□□□ -0.37
DNMT3A-211ENST00000474887 HSPA4LO95757 839 aa12.74□□□□□ -0.37
DNMT3A-211ENST00000474887 IL33O95760 270 aa12.74□□□□□ -0.37
DNMT3A-211ENST00000474887 NUDT17P0C025 328 aa12.74□□□□□ -0.37
DNMT3A-211ENST00000474887 TMIGD3P0DMS9 266 aaPredicted RBP12.74□□□□□ -0.37
DNMT3A-211ENST00000474887 EPXP11678 715 aa12.74□□□□□ -0.37
DNMT3A-211ENST00000474887 PEPDP12955 493 aa12.74□□□□□ -0.37
DNMT3A-211ENST00000474887 POU3F2P20265 443 aaPredicted RBP12.74□□□□□ -0.37
DNMT3A-211ENST00000474887 DPP4P27487 766 aa12.74□□□□□ -0.37
DNMT3A-211ENST00000474887 EVI2BP34910 448 aa12.74□□□□□ -0.37
DNMT3A-211ENST00000474887 RPL3P39023 403 aaKnown RBP12.74□□□□□ -0.37
DNMT3A-211ENST00000474887 SLCO1A2P46721 670 aa12.74□□□□□ -0.37
DNMT3A-211ENST00000474887 DGKQP52824 942 aa12.74□□□□□ -0.37
DNMT3A-211ENST00000474887 C17orf67Q0P5P2 114 aa12.74□□□□□ -0.37
DNMT3A-211ENST00000474887 FGFBP1Q14512 234 aa12.74□□□□□ -0.37
DNMT3A-211ENST00000474887 LRIG3Q6UXM1 1119 aa12.74□□□□□ -0.37
DNMT3A-211ENST00000474887 NPSR1Q6W5P4 371 aa12.74□□□□□ -0.37
DNMT3A-211ENST00000474887 CHMP1BQ7LBR1 199 aa12.74□□□□□ -0.37
DNMT3A-211ENST00000474887 R3HCC1LQ7Z5L2 792 aaKnown RBP12.74□□□□□ -0.37
DNMT3A-211ENST00000474887 FADS6Q8N9I5 356 aa12.74□□□□□ -0.37
DNMT3A-211ENST00000474887 NAXEQ8NCW5 288 aa12.74□□□□□ -0.37
DNMT3A-211ENST00000474887 OR4K17Q8NGC6 315 aa12.74□□□□□ -0.37
DNMT3A-211ENST00000474887 HOXB13Q92826 284 aaPredicted RBP12.74□□□□□ -0.37
DNMT3A-211ENST00000474887 FCRL1Q96LA6 429 aa12.74□□□□□ -0.37
DNMT3A-211ENST00000474887 SFXN2Q96NB2 322 aa12.74□□□□□ -0.37
DNMT3A-211ENST00000474887 REEP4Q9H6H4 257 aa12.74□□□□□ -0.37
DNMT3A-211ENST00000474887 RASSF1Q9NS23 344 aa12.74□□□□□ -0.37
DNMT3A-211ENST00000474887 PPP4R1LQ9P1A2 415 aa12.74□□□□□ -0.37
DNMT3A-211ENST00000474887 DKKL1Q9UK85 242 aa12.74□□□□□ -0.37
DNMT3A-211ENST00000474887 FREM3P0C091 2139 aa12.74□□□□□ -0.37
DNMT3A-211ENST00000474887 ARHGAP21Q5T5U3 1957 aa12.73□□□□□ -0.37
DNMT3A-211ENST00000474887 IGLV3-32A0A0A0MS00 114 aa12.73□□□□□ -0.37
DNMT3A-211ENST00000474887 C2orf72A6NCS6 295 aa12.73□□□□□ -0.37
DNMT3A-211ENST00000474887 TUBAL3A6NHL2 446 aa12.73□□□□□ -0.37
DNMT3A-211ENST00000474887 TMEM114B3SHH9 223 aa12.73□□□□□ -0.37
DNMT3A-211ENST00000474887 KCNH1O95259 989 aa12.73□□□□□ -0.37
DNMT3A-211ENST00000474887 NGFRP08138 427 aa12.73□□□□□ -0.37
DNMT3A-211ENST00000474887 PRPS2P11908 318 aa12.73□□□□□ -0.37
DNMT3A-211ENST00000474887 ZNF708P17019 499 aa12.73□□□□□ -0.37
DNMT3A-211ENST00000474887 MAPK1P28482 360 aa12.73□□□□□ -0.37
DNMT3A-211ENST00000474887 MC3RP41968 323 aa12.73□□□□□ -0.37
DNMT3A-211ENST00000474887 LHX2P50458 406 aa12.73□□□□□ -0.37
DNMT3A-211ENST00000474887 DIO3P55073 304 aa12.73□□□□□ -0.37
DNMT3A-211ENST00000474887 DESI1Q6ICB0 168 aa12.73□□□□□ -0.37
DNMT3A-211ENST00000474887 TMEM107Q6UX40 140 aa12.73□□□□□ -0.37
DNMT3A-211ENST00000474887 ZZZ3Q8IYH5 903 aa12.73□□□□□ -0.37
DNMT3A-211ENST00000474887 CDRT4Q8N9R6 151 aa12.73□□□□□ -0.37
DNMT3A-211ENST00000474887 CDC26Q8NHZ8 85 aa12.73□□□□□ -0.37
DNMT3A-211ENST00000474887 APOPT1Q96IL0 206 aa12.73□□□□□ -0.37
DNMT3A-211ENST00000474887 TUBA1CQ9BQE3 449 aa12.73□□□□□ -0.37
DNMT3A-211ENST00000474887 GATA5Q9BWX5 397 aaPredicted RBP12.73□□□□□ -0.37
DNMT3A-211ENST00000474887 POLDIP3Q9BY77 421 aaKnown RBP12.73□□□□□ -0.37
DNMT3A-211ENST00000474887 CRIM1Q9NZV1 1036 aa12.73□□□□□ -0.37
DNMT3A-211ENST00000474887 POLR3HQ9Y535 204 aaPredicted RBP12.73□□□□□ -0.37
DNMT3A-211ENST00000474887 AKAP9Q99996 3911 aa12.73□□□□□ -0.37
DNMT3A-211ENST00000474887 EXPH5Q8NEV8 1989 aa12.72□□□□□ -0.37
DNMT3A-211ENST00000474887 A6NNC1 897 aa12.72□□□□□ -0.37
DNMT3A-211ENST00000474887 PDPK1O15530 556 aa12.72□□□□□ -0.37
DNMT3A-211ENST00000474887 HCRTR2O43614 444 aa12.72□□□□□ -0.37
DNMT3A-211ENST00000474887 DNAJA1P31689 397 aaKnown RBP12.72□□□□□ -0.37
DNMT3A-211ENST00000474887 FRKP42685 505 aaPredicted RBP12.72□□□□□ -0.37
DNMT3A-211ENST00000474887 CLDN18P56856 261 aa12.72□□□□□ -0.37
DNMT3A-211ENST00000474887 RIPPLY3P57055 190 aa12.72□□□□□ -0.37
DNMT3A-211ENST00000474887 PRR5P85299 388 aa12.72□□□□□ -0.37
DNMT3A-211ENST00000474887 MLC1Q15049 377 aa12.72□□□□□ -0.37
DNMT3A-211ENST00000474887 DCST1Q5T197 706 aa12.72□□□□□ -0.37
DNMT3A-211ENST00000474887 KANK2Q63ZY3 851 aa12.72□□□□□ -0.37
DNMT3A-211ENST00000474887 Q6ZSR9 355 aa12.72□□□□□ -0.37
DNMT3A-211ENST00000474887 C10orf107Q8IVU9 208 aa12.72□□□□□ -0.37
DNMT3A-211ENST00000474887 MEIOBQ8N635 442 aa12.72□□□□□ -0.37
DNMT3A-211ENST00000474887 BANPQ8N9N5 519 aa12.72□□□□□ -0.37
DNMT3A-211ENST00000474887 OR4N2Q8NGD1 307 aa12.72□□□□□ -0.37
DNMT3A-211ENST00000474887 OR6Y1Q8NGX8 325 aa12.72□□□□□ -0.37
DNMT3A-211ENST00000474887 EPS8L3Q8TE67 593 aaKnown RBP12.72□□□□□ -0.37
DNMT3A-211ENST00000474887 EFHD2Q96C19 240 aaPredicted RBP12.72□□□□□ -0.37
DNMT3A-211ENST00000474887 PPCDCQ96CD2 204 aa12.72□□□□□ -0.37
DNMT3A-211ENST00000474887 PPP3R2Q96LZ3 170 aa12.72□□□□□ -0.37
DNMT3A-211ENST00000474887 DACH2Q96NX9 599 aa12.72□□□□□ -0.37
DNMT3A-211ENST00000474887 FOXC2Q99958 501 aa12.72□□□□□ -0.37
DNMT3A-211ENST00000474887 PIGQQ9BRB3 760 aa12.72□□□□□ -0.37
DNMT3A-211ENST00000474887 CLEC4MQ9H2X3 399 aaPredicted RBP12.72□□□□□ -0.37
DNMT3A-211ENST00000474887 ANKRA2Q9H9E1 313 aa12.72□□□□□ -0.37
DNMT3A-211ENST00000474887 CLCF1Q9UBD9 225 aa12.72□□□□□ -0.37
DNMT3A-211ENST00000474887 LGALS13Q9UHV8 139 aa12.72□□□□□ -0.37
DNMT3A-211ENST00000474887 FBXL2Q9UKC9 423 aa12.72□□□□□ -0.37
DNMT3A-211ENST00000474887 TRAF6Q9Y4K3 522 aa12.72□□□□□ -0.37
DNMT3A-211ENST00000474887 NCKAP5O14513 1909 aa12.72□□□□□ -0.37
DNMT3A-211ENST00000474887 MTORP42345 2549 aa12.71□□□□□ -0.37
DNMT3A-211ENST00000474887 CSMD2Q7Z408 3487 aa12.71□□□□□ -0.37
DNMT3A-211ENST00000474887 ITPR3Q14573 2671 aa12.71□□□□□ -0.37
DNMT3A-211ENST00000474887 TLDC2A0PJX2 215 aa12.71□□□□□ -0.37
DNMT3A-211ENST00000474887 SMIM23A6NLE4 172 aa12.71□□□□□ -0.37
DNMT3A-211ENST00000474887 CLCA1A8K7I4 914 aa12.71□□□□□ -0.37
DNMT3A-211ENST00000474887 MSTNO14793 375 aa12.71□□□□□ -0.37
DNMT3A-211ENST00000474887 TNFRSF21O75509 655 aa12.71□□□□□ -0.37
DNMT3A-211ENST00000474887 LYPLA1O75608 230 aaPredicted RBP12.71□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 51.6 ms