RNA–Protein interactions for RNA: ENST00000474597.5

SSR1-204, Transcript of signal sequence receptor subunit 1, humanhuman

TSL 5 BASIC

Gene SSR1, Length 1,808 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR1-204ENST00000474597 ARHGDIGQ99819 225 aa18.39■□□□□ 0.54
SSR1-204ENST00000474597 WFDC6Q9BQY6 131 aa18.39■□□□□ 0.54
SSR1-204ENST00000474597 FNDC11Q9BVV2 318 aa18.39■□□□□ 0.54
SSR1-204ENST00000474597 SAP130Q9H0E3 1048 aa18.39■□□□□ 0.54
SSR1-204ENST00000474597 OCIAD1Q9NX40 245 aa18.39■□□□□ 0.54
SSR1-204ENST00000474597 MYRFQ9Y2G1 1151 aa18.39■□□□□ 0.54
SSR1-204ENST00000474597 ASCC3Q8N3C0 2202 aaKnown RBP18.39■□□□□ 0.53
SSR1-204ENST00000474597 VPS13AQ96RL7 3174 aa18.39■□□□□ 0.53
SSR1-204ENST00000474597 LOC100130705A0A1B0GUX0 176 aa18.39■□□□□ 0.53
SSR1-204ENST00000474597 SYNDIG1LA6NDD5 238 aa18.39■□□□□ 0.53
SSR1-204ENST00000474597 AGAP5A6NIR3 686 aa18.39■□□□□ 0.53
SSR1-204ENST00000474597 PCDH17O14917 1159 aa18.39■□□□□ 0.53
SSR1-204ENST00000474597 KIAA0513O60268 411 aa18.39■□□□□ 0.53
SSR1-204ENST00000474597 BRINP1O60477 761 aa18.39■□□□□ 0.53
SSR1-204ENST00000474597 ITGAMP11215 1152 aa18.39■□□□□ 0.53
SSR1-204ENST00000474597 IFNA8P32881 189 aa18.39■□□□□ 0.53
SSR1-204ENST00000474597 LIMS1P48059 325 aa18.39■□□□□ 0.53
SSR1-204ENST00000474597 ELAVL1Q15717 326 aaKnown RBP18.39■□□□□ 0.53
SSR1-204ENST00000474597 NKAIN1Q4KMZ8 207 aa18.39■□□□□ 0.53
SSR1-204ENST00000474597 DCST1Q5T197 706 aa18.39■□□□□ 0.53
SSR1-204ENST00000474597 SLC5A8Q8N695 610 aa18.39■□□□□ 0.53
SSR1-204ENST00000474597 PTPMT1Q8WUK0 201 aaPredicted RBP18.39■□□□□ 0.53
SSR1-204ENST00000474597 FKBP10Q96AY3 582 aa18.39■□□□□ 0.53
SSR1-204ENST00000474597 PRRC1Q96M27 445 aa18.39■□□□□ 0.53
SSR1-204ENST00000474597 MUS81Q96NY9 551 aa18.39■□□□□ 0.53
SSR1-204ENST00000474597 VN1R1Q9GZP7 353 aa18.39■□□□□ 0.53
SSR1-204ENST00000474597 ZNF696Q9H7X3 374 aa18.39■□□□□ 0.53
SSR1-204ENST00000474597 CTSFQ9UBX1 484 aa18.39■□□□□ 0.53
SSR1-204ENST00000474597 ACAD8Q9UKU7 415 aa18.39■□□□□ 0.53
SSR1-204ENST00000474597 HCN4Q9Y3Q4 1203 aa18.39■□□□□ 0.53
SSR1-204ENST00000474597 OR10H1Q9Y4A9 318 aa18.39■□□□□ 0.53
SSR1-204ENST00000474597 PCDHGA8Q9Y5G5 932 aa18.39■□□□□ 0.53
SSR1-204ENST00000474597 TCRBV16S1A1N1A0A5B0 115 aa18.38■□□□□ 0.53
SSR1-204ENST00000474597 TRHRP34981 398 aaPredicted RBP18.38■□□□□ 0.53
SSR1-204ENST00000474597 PIGAP37287 484 aa18.38■□□□□ 0.53
SSR1-204ENST00000474597 RGS8P57771 180 aaPredicted RBP18.38■□□□□ 0.53
SSR1-204ENST00000474597 DCDP81605 110 aaKnown RBP18.38■□□□□ 0.53
SSR1-204ENST00000474597 PIN1Q13526 163 aaPredicted RBP18.38■□□□□ 0.53
SSR1-204ENST00000474597 IL11RAQ14626 422 aa18.38■□□□□ 0.53
SSR1-204ENST00000474597 FLYWCH1Q4VC44 716 aa18.38■□□□□ 0.53
SSR1-204ENST00000474597 B3GNT8Q7Z7M8 397 aa18.38■□□□□ 0.53
SSR1-204ENST00000474597 ZNF786Q8N393 782 aa18.38■□□□□ 0.53
SSR1-204ENST00000474597 ZNF615Q8N8J6 731 aa18.38■□□□□ 0.53
SSR1-204ENST00000474597 NR4A3Q92570 626 aa18.38■□□□□ 0.53
SSR1-204ENST00000474597 ART5Q96L15 291 aa18.38■□□□□ 0.53
SSR1-204ENST00000474597 ING2Q9H160 280 aa18.38■□□□□ 0.53
SSR1-204ENST00000474597 ARMC7Q9H6L4 198 aa18.38■□□□□ 0.53
SSR1-204ENST00000474597 APMAPQ9HDC9 416 aa18.38■□□□□ 0.53
SSR1-204ENST00000474597 FBXO34Q9NWN3 711 aa18.38■□□□□ 0.53
SSR1-204ENST00000474597 COL5A1P20908 1838 aaPredicted RBP18.38■□□□□ 0.53
SSR1-204ENST00000474597 AP3D1O14617 1153 aa18.37■□□□□ 0.53
SSR1-204ENST00000474597 BCKDKO14874 412 aa18.37■□□□□ 0.53
SSR1-204ENST00000474597 CCNYL3P0C7X3 344 aa18.37■□□□□ 0.53
SSR1-204ENST00000474597 TAS2R41P59536 307 aa18.37■□□□□ 0.53
SSR1-204ENST00000474597 ZFP36L1Q07352 338 aaKnown RBP18.37■□□□□ 0.53
SSR1-204ENST00000474597 ZNF836Q6ZNA1 936 aa18.37■□□□□ 0.53
SSR1-204ENST00000474597 COX15Q7KZN9 410 aa18.37■□□□□ 0.53
SSR1-204ENST00000474597 CLIP4Q8N3C7 705 aa18.37■□□□□ 0.53
SSR1-204ENST00000474597 OR9Q2Q8NGE9 314 aa18.37■□□□□ 0.53
SSR1-204ENST00000474597 DAZLQ92904 295 aaKnown RBP18.37■□□□□ 0.53
SSR1-204ENST00000474597 DHRS1Q96LJ7 313 aa18.37■□□□□ 0.53
SSR1-204ENST00000474597 ITPAQ9BY32 194 aa18.37■□□□□ 0.53
SSR1-204ENST00000474597 OR8D2Q9GZM6 311 aa18.37■□□□□ 0.53
SSR1-204ENST00000474597 TGIF2Q9GZN2 237 aa18.37■□□□□ 0.53
SSR1-204ENST00000474597 PAPOLBQ9NRJ5 636 aaKnown RBP18.37■□□□□ 0.53
SSR1-204ENST00000474597 A4GNTQ9UNA3 340 aa18.37■□□□□ 0.53
SSR1-204ENST00000474597 CFL2Q9Y281 166 aa18.37■□□□□ 0.53
SSR1-204ENST00000474597 DTX4Q9Y2E6 619 aa18.37■□□□□ 0.53
SSR1-204ENST00000474597 POFUT2Q9Y2G5 429 aa18.37■□□□□ 0.53
SSR1-204ENST00000474597 NPIPA5A0A0B4J1W7 369 aa18.37■□□□□ 0.53
SSR1-204ENST00000474597 ARRDC5A6NEK1 342 aa18.37■□□□□ 0.53
SSR1-204ENST00000474597 NPIPA7E9PJI5 369 aa18.37■□□□□ 0.53
SSR1-204ENST00000474597 POLR1CO15160 346 aaPredicted RBP18.37■□□□□ 0.53
SSR1-204ENST00000474597 SLC16A6O15403 523 aa18.37■□□□□ 0.53
SSR1-204ENST00000474597 SEMA7AO75326 666 aa18.37■□□□□ 0.53
SSR1-204ENST00000474597 NPIPA8P0DM63 369 aa18.37■□□□□ 0.53
SSR1-204ENST00000474597 CYP4B1P13584 511 aa18.37■□□□□ 0.53
SSR1-204ENST00000474597 RPS4Y1P22090 263 aaKnown RBP18.37■□□□□ 0.53
SSR1-204ENST00000474597 ELAVL4P26378 380 aaKnown RBP18.37■□□□□ 0.53
SSR1-204ENST00000474597 RORAP35398 523 aa18.37■□□□□ 0.53
SSR1-204ENST00000474597 LAPTM4BQ86VI4 370 aa18.37■□□□□ 0.53
SSR1-204ENST00000474597 SLC38A9Q8NBW4 561 aa18.37■□□□□ 0.53
SSR1-204ENST00000474597 STT3BQ8TCJ2 826 aa18.37■□□□□ 0.53
SSR1-204ENST00000474597 PSD2Q9BQI7 771 aa18.37■□□□□ 0.53
SSR1-204ENST00000474597 G6PC3Q9BUM1 346 aa18.37■□□□□ 0.53
SSR1-204ENST00000474597 C14orf105Q9NVL8 296 aa18.37■□□□□ 0.53
SSR1-204ENST00000474597 RLIMQ9NVW2 624 aa18.37■□□□□ 0.53
SSR1-204ENST00000474597 GPR55Q9Y2T6 319 aaPredicted RBP18.37■□□□□ 0.53
SSR1-204ENST00000474597 TRBV4-1A0A0J9YWV2 114 aa18.36■□□□□ 0.53
SSR1-204ENST00000474597 FAAHO00519 579 aa18.36■□□□□ 0.53
SSR1-204ENST00000474597 PEX12O00623 359 aa18.36■□□□□ 0.53
SSR1-204ENST00000474597 FRS3O43559 492 aa18.36■□□□□ 0.53
SSR1-204ENST00000474597 OXSR1O95747 527 aaPredicted RBP18.36■□□□□ 0.53
SSR1-204ENST00000474597 ZGLP1P0C6A0 271 aa18.36■□□□□ 0.53
SSR1-204ENST00000474597 FGF5P12034 268 aa18.36■□□□□ 0.53
SSR1-204ENST00000474597 NID1P14543 1247 aa18.36■□□□□ 0.53
SSR1-204ENST00000474597 POLR2IP36954 125 aaKnown RBP18.36■□□□□ 0.53
SSR1-204ENST00000474597 IL18R1Q13478 541 aa18.36■□□□□ 0.53
SSR1-204ENST00000474597 SF3A2Q15428 464 aaKnown RBP18.36■□□□□ 0.53
SSR1-204ENST00000474597 NNATQ16517 81 aa18.36■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms