RNA–Protein interactions for RNA: ENST00000474215.5

CKS1B-206, Transcript of CDC28 protein kinase regulatory subunit 1B, humanhuman

TSL 3

Gene CKS1B, Length 739 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1B-206ENST00000474215 GRK2P25098 689 aa10.18□□□□□ -0.78
CKS1B-206ENST00000474215 HPCAL1P37235 193 aa10.18□□□□□ -0.78
CKS1B-206ENST00000474215 RPL3P39023 403 aaKnown RBP10.18□□□□□ -0.78
CKS1B-206ENST00000474215 PRKAG1P54619 331 aa10.18□□□□□ -0.78
CKS1B-206ENST00000474215 GAS1P54826 345 aa10.18□□□□□ -0.78
CKS1B-206ENST00000474215 ABCE1P61221 599 aaKnown RBP10.18□□□□□ -0.78
CKS1B-206ENST00000474215 TFF3Q07654 80 aa10.18□□□□□ -0.78
CKS1B-206ENST00000474215 MLC1Q15049 377 aa10.18□□□□□ -0.78
CKS1B-206ENST00000474215 CHI3L2Q15782 390 aa10.18□□□□□ -0.78
CKS1B-206ENST00000474215 VPS26BQ4G0F5 336 aa10.18□□□□□ -0.78
CKS1B-206ENST00000474215 IL23RQ5VWK5 629 aa10.18□□□□□ -0.78
CKS1B-206ENST00000474215 OR5M10Q6IEU7 315 aa10.18□□□□□ -0.78
CKS1B-206ENST00000474215 MEX3BQ6ZN04 569 aaKnown RBP10.18□□□□□ -0.78
CKS1B-206ENST00000474215 SEM1Q6ZVN7 128 aa10.18□□□□□ -0.78
CKS1B-206ENST00000474215 GDF7Q7Z4P5 450 aa10.18□□□□□ -0.78
CKS1B-206ENST00000474215 ZNF295-AS1Q8N0V1 137 aa10.18□□□□□ -0.78
CKS1B-206ENST00000474215 FNDC5Q8NAU1 212 aa10.18□□□□□ -0.78
CKS1B-206ENST00000474215 OR7A2PQ8NGA2 310 aa10.18□□□□□ -0.78
CKS1B-206ENST00000474215 GPR151Q8TDV0 419 aa10.18□□□□□ -0.78
CKS1B-206ENST00000474215 ZBTB9Q96C00 473 aa10.18□□□□□ -0.78
CKS1B-206ENST00000474215 DTNBP1Q96EV8 351 aa10.18□□□□□ -0.78
CKS1B-206ENST00000474215 WDYHV1Q96HA8 205 aa10.18□□□□□ -0.78
CKS1B-206ENST00000474215 TREX2Q9BQ50 279 aaPredicted RBP10.18□□□□□ -0.78
CKS1B-206ENST00000474215 TRIM8Q9BZR9 551 aa10.18□□□□□ -0.78
CKS1B-206ENST00000474215 OR2B2Q9GZK3 357 aa10.18□□□□□ -0.78
CKS1B-206ENST00000474215 ZNF395Q9H8N7 513 aaPredicted RBP10.18□□□□□ -0.78
CKS1B-206ENST00000474215 C3orf14Q9HBI5 128 aa10.18□□□□□ -0.78
CKS1B-206ENST00000474215 EQTNQ9NQ60 294 aa10.18□□□□□ -0.78
CKS1B-206ENST00000474215 SDHAF3Q9NRP4 125 aa10.18□□□□□ -0.78
CKS1B-206ENST00000474215 TAS2R10Q9NYW0 307 aa10.18□□□□□ -0.78
CKS1B-206ENST00000474215 CAMK2AQ9UQM7 478 aa10.18□□□□□ -0.78
CKS1B-206ENST00000474215 EPB41L3Q9Y2J2 1087 aaPredicted RBP10.18□□□□□ -0.78
CKS1B-206ENST00000474215 MRPS18CQ9Y3D5 142 aaKnown RBP10.18□□□□□ -0.78
CKS1B-206ENST00000474215 FBN2P35556 2912 aa10.18□□□□□ -0.78
CKS1B-206ENST00000474215 NCKAP5O14513 1909 aa10.17□□□□□ -0.78
CKS1B-206ENST00000474215 A0A1W2PRB8 838 aa10.17□□□□□ -0.78
CKS1B-206ENST00000474215 HSPB2A8KAH6 182 aa10.17□□□□□ -0.78
CKS1B-206ENST00000474215 SCAMP2O15127 329 aaKnown RBP10.17□□□□□ -0.78
CKS1B-206ENST00000474215 EMC8O43402 210 aa10.17□□□□□ -0.78
CKS1B-206ENST00000474215 NKX2-2O95096 273 aa10.17□□□□□ -0.78
CKS1B-206ENST00000474215 KCNH1O95259 989 aa10.17□□□□□ -0.78
CKS1B-206ENST00000474215 LAMP1P11279 417 aa10.17□□□□□ -0.78
CKS1B-206ENST00000474215 EFNA1P20827 205 aaPredicted RBP10.17□□□□□ -0.78
CKS1B-206ENST00000474215 PRPS1L1P21108 318 aa10.17□□□□□ -0.78
CKS1B-206ENST00000474215 SRD5A2P31213 254 aa10.17□□□□□ -0.78
CKS1B-206ENST00000474215 CEACAM8P31997 349 aaPredicted RBP10.17□□□□□ -0.78
CKS1B-206ENST00000474215 EVI2BP34910 448 aa10.17□□□□□ -0.78
CKS1B-206ENST00000474215 MAP3K8P41279 467 aa10.17□□□□□ -0.78
CKS1B-206ENST00000474215 CLK3P49761 638 aaKnown RBP10.17□□□□□ -0.78
CKS1B-206ENST00000474215 PSMD4P55036 377 aaKnown RBP10.17□□□□□ -0.78
CKS1B-206ENST00000474215 PTGR1Q14914 329 aa10.17□□□□□ -0.78
CKS1B-206ENST00000474215 HSPB2Q16082 182 aa10.17□□□□□ -0.78
CKS1B-206ENST00000474215 ACSF3Q4G176 576 aaPredicted RBP10.17□□□□□ -0.78
CKS1B-206ENST00000474215 DCST1Q5T197 706 aa10.17□□□□□ -0.78
CKS1B-206ENST00000474215 CPTPQ5TA50 214 aa10.17□□□□□ -0.78
CKS1B-206ENST00000474215 NSUN5P2Q63ZY6 315 aa10.17□□□□□ -0.78
CKS1B-206ENST00000474215 ENPP6Q6UWR7 440 aa10.17□□□□□ -0.78
CKS1B-206ENST00000474215 LACC1Q8IV20 430 aa10.17□□□□□ -0.78
CKS1B-206ENST00000474215 LIX1LQ8IVB5 337 aa10.17□□□□□ -0.78
CKS1B-206ENST00000474215 TRIM42Q8IWZ5 723 aa10.17□□□□□ -0.78
CKS1B-206ENST00000474215 NATD1Q8N6N6 113 aa10.17□□□□□ -0.78
CKS1B-206ENST00000474215 CDRT4Q8N9R6 151 aa10.17□□□□□ -0.78
CKS1B-206ENST00000474215 NUP43Q8NFH3 380 aa10.17□□□□□ -0.78
CKS1B-206ENST00000474215 HOXB13Q92826 284 aaPredicted RBP10.17□□□□□ -0.78
CKS1B-206ENST00000474215 COQ8BQ96D53 544 aa10.17□□□□□ -0.78
CKS1B-206ENST00000474215 PRPF18Q99633 342 aaKnown RBP10.17□□□□□ -0.78
CKS1B-206ENST00000474215 C1orf50Q9BV19 199 aa10.17□□□□□ -0.78
CKS1B-206ENST00000474215 NPDC1Q9NQX5 325 aaPredicted RBP10.17□□□□□ -0.78
CKS1B-206ENST00000474215 ATAD3AQ9NVI7 634 aa10.17□□□□□ -0.78
CKS1B-206ENST00000474215 FAM120CQ9NX05 1096 aaKnown RBP10.17□□□□□ -0.78
CKS1B-206ENST00000474215 FBXL2Q9UKC9 423 aa10.17□□□□□ -0.78
CKS1B-206ENST00000474215 ABCG2Q9UNQ0 655 aa10.17□□□□□ -0.78
CKS1B-206ENST00000474215 EIF3LQ9Y262 564 aaKnown RBP10.17□□□□□ -0.78
CKS1B-206ENST00000474215 RAP2CQ9Y3L5 183 aa10.17□□□□□ -0.78
CKS1B-206ENST00000474215 DNAJC13O75165 2243 aa10.17□□□□□ -0.78
CKS1B-206ENST00000474215 EXPH5Q8NEV8 1989 aa10.16□□□□□ -0.78
CKS1B-206ENST00000474215 GIMAP1-GIMAP5A0A087WTJ2 511 aa10.16□□□□□ -0.78
CKS1B-206ENST00000474215 GXYLT2A0PJZ3 443 aa10.16□□□□□ -0.78
CKS1B-206ENST00000474215 SCO2O43819 266 aa10.16□□□□□ -0.78
CKS1B-206ENST00000474215 ZIC3O60481 467 aa10.16□□□□□ -0.78
CKS1B-206ENST00000474215 IL2RAP01589 272 aa10.16□□□□□ -0.78
CKS1B-206ENST00000474215 IGKV1D-16P01601 117 aa10.16□□□□□ -0.78
CKS1B-206ENST00000474215 IGFBP2P18065 325 aa10.16□□□□□ -0.78
CKS1B-206ENST00000474215 DPP4P27487 766 aa10.16□□□□□ -0.78
CKS1B-206ENST00000474215 MSX1P28360 303 aa10.16□□□□□ -0.78
CKS1B-206ENST00000474215 SSTR2P30874 369 aa10.16□□□□□ -0.78
CKS1B-206ENST00000474215 TIMP3P35625 211 aa10.16□□□□□ -0.78
CKS1B-206ENST00000474215 RFX3P48380 749 aa10.16□□□□□ -0.78
CKS1B-206ENST00000474215 SLC1A6P48664 564 aa10.16□□□□□ -0.78
CKS1B-206ENST00000474215 RPL14P50914 215 aaKnown RBP10.16□□□□□ -0.78
CKS1B-206ENST00000474215 GFRA1P56159 465 aa10.16□□□□□ -0.78
CKS1B-206ENST00000474215 DSCR4P56555 118 aaPredicted RBP10.16□□□□□ -0.78
CKS1B-206ENST00000474215 PRR5P85299 388 aa10.16□□□□□ -0.78
CKS1B-206ENST00000474215 EMX2Q04743 252 aa10.16□□□□□ -0.78
CKS1B-206ENST00000474215 MAD2L1Q13257 205 aaPredicted RBP10.16□□□□□ -0.78
CKS1B-206ENST00000474215 STX3Q13277 289 aa10.16□□□□□ -0.78
CKS1B-206ENST00000474215 SMU1Q2TAY7 513 aa10.16□□□□□ -0.78
CKS1B-206ENST00000474215 SLC25A35Q3KQZ1 300 aa10.16□□□□□ -0.78
CKS1B-206ENST00000474215 MFSD12Q6NUT3 480 aa10.16□□□□□ -0.78
CKS1B-206ENST00000474215 AAGABQ6PD74 315 aa10.16□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms