RNA–Protein interactions for RNA: ENST00000474136.5

APP-215, Transcript of amyloid beta precursor protein, humanhuman

TSL 1 (best)

Gene APP, Length 1,309 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APP-215ENST00000474136 SPDYAQ5MJ70 313 aa18.41■□□□□ 0.54
APP-215ENST00000474136 DEPDC1Q5TB30 811 aa18.41■□□□□ 0.54
APP-215ENST00000474136 SCIMPQ6UWF3 145 aa18.41■□□□□ 0.54
APP-215ENST00000474136 LUZP2Q86TE4 346 aa18.41■□□□□ 0.54
APP-215ENST00000474136 LRRC75A-AS1Q8N1F1 130 aa18.41■□□□□ 0.54
APP-215ENST00000474136 ACOT4Q8N9L9 421 aa18.41■□□□□ 0.54
APP-215ENST00000474136 SIMC1Q8NDZ2 872 aa18.41■□□□□ 0.54
APP-215ENST00000474136 DIO2Q92813 273 aa18.41■□□□□ 0.54
APP-215ENST00000474136 PPP1R36Q96LQ0 422 aa18.41■□□□□ 0.54
APP-215ENST00000474136 C3orf30Q96M34 536 aa18.41■□□□□ 0.54
APP-215ENST00000474136 EBF4Q9BQW3 602 aa18.41■□□□□ 0.54
APP-215ENST00000474136 UGT2B28Q9BY64 529 aa18.41■□□□□ 0.54
APP-215ENST00000474136 ACPTQ9BZG2 426 aa18.41■□□□□ 0.54
APP-215ENST00000474136 LRTM1Q9HBL6 345 aa18.41■□□□□ 0.54
APP-215ENST00000474136 ANK3Q12955 4377 aaKnown RBP18.4■□□□□ 0.54
APP-215ENST00000474136 LSM1O15116 133 aaKnown RBP18.4■□□□□ 0.54
APP-215ENST00000474136 SH3BGRLO75368 114 aa18.4■□□□□ 0.54
APP-215ENST00000474136 SEC22BO75396 215 aa18.4■□□□□ 0.54
APP-215ENST00000474136 IL18BPO95998 194 aa18.4■□□□□ 0.54
APP-215ENST00000474136 TMIGD3P0DMS9 266 aaPredicted RBP18.4■□□□□ 0.54
APP-215ENST00000474136 SOX18P35713 384 aa18.4■□□□□ 0.54
APP-215ENST00000474136 CDK9P50750 372 aaKnown RBP18.4■□□□□ 0.54
APP-215ENST00000474136 RPS13P62277 151 aaKnown RBP18.4■□□□□ 0.54
APP-215ENST00000474136 ERVK-8P63133 956 aa18.4■□□□□ 0.54
APP-215ENST00000474136 IGLV3-21P80748 117 aaPredicted RBP18.4■□□□□ 0.54
APP-215ENST00000474136 PPP2R2BQ00005 443 aa18.4■□□□□ 0.54
APP-215ENST00000474136 EMX2Q04743 252 aa18.4■□□□□ 0.54
APP-215ENST00000474136 NTRK2Q16620 822 aa18.4■□□□□ 0.54
APP-215ENST00000474136 AP5B1Q2VPB7 878 aa18.4■□□□□ 0.54
APP-215ENST00000474136 EIPR1Q53HC9 387 aa18.4■□□□□ 0.54
APP-215ENST00000474136 C6orf136Q5SQH8 315 aa18.4■□□□□ 0.54
APP-215ENST00000474136 KHDRBS2Q5VWX1 349 aaKnown RBP18.4■□□□□ 0.54
APP-215ENST00000474136 YTHDF3Q7Z739 585 aaKnown RBP18.4■□□□□ 0.54
APP-215ENST00000474136 SMPDL3BQ92485 455 aa18.4■□□□□ 0.54
APP-215ENST00000474136 GNRHR2Q96P88 292 aa18.4■□□□□ 0.54
APP-215ENST00000474136 KCNC2Q96PR1 638 aa18.4■□□□□ 0.54
APP-215ENST00000474136 BDH2Q9BUT1 245 aa18.4■□□□□ 0.54
APP-215ENST00000474136 MS4A8Q9BY19 250 aa18.4■□□□□ 0.54
APP-215ENST00000474136 UBQLN3Q9H347 655 aa18.4■□□□□ 0.54
APP-215ENST00000474136 HEY2Q9UBP5 337 aa18.4■□□□□ 0.54
APP-215ENST00000474136 UBDO15205 165 aa18.39■□□□□ 0.53
APP-215ENST00000474136 PEX11AO75192 247 aa18.39■□□□□ 0.53
APP-215ENST00000474136 TGFB1P01137 390 aa18.39■□□□□ 0.53
APP-215ENST00000474136 HPNP05981 417 aa18.39■□□□□ 0.53
APP-215ENST00000474136 CPN2P22792 545 aa18.39■□□□□ 0.53
APP-215ENST00000474136 ACSM2AQ08AH3 577 aa18.39■□□□□ 0.53
APP-215ENST00000474136 GSTA3Q16772 222 aa18.39■□□□□ 0.53
APP-215ENST00000474136 FNDC7Q5VTL7 733 aa18.39■□□□□ 0.53
APP-215ENST00000474136 ACSM2BQ68CK6 577 aa18.39■□□□□ 0.53
APP-215ENST00000474136 PLXDC2Q6UX71 529 aa18.39■□□□□ 0.53
APP-215ENST00000474136 PAGE2Q7Z2X7 111 aa18.39■□□□□ 0.53
APP-215ENST00000474136 DND1Q8IYX4 353 aaKnown RBP18.39■□□□□ 0.53
APP-215ENST00000474136 OR2T11Q8NH01 316 aa18.39■□□□□ 0.53
APP-215ENST00000474136 RGMAQ96B86 450 aa18.39■□□□□ 0.53
APP-215ENST00000474136 FBXL20Q96IG2 436 aa18.39■□□□□ 0.53
APP-215ENST00000474136 OR52B2Q96RD2 323 aa18.39■□□□□ 0.53
APP-215ENST00000474136 HBEGFQ99075 208 aa18.39■□□□□ 0.53
APP-215ENST00000474136 PIP5K1AQ99755 562 aa18.39■□□□□ 0.53
APP-215ENST00000474136 WWTR1Q9GZV5 400 aa18.39■□□□□ 0.53
APP-215ENST00000474136 CALHM2Q9HA72 323 aa18.39■□□□□ 0.53
APP-215ENST00000474136 SIRT5Q9NXA8 310 aa18.39■□□□□ 0.53
APP-215ENST00000474136 NOP53Q9NZM5 478 aaKnown RBP18.39■□□□□ 0.53
APP-215ENST00000474136 C6orf203Q9P0P8 240 aaPredicted RBP18.39■□□□□ 0.53
APP-215ENST00000474136 ERVK-19Q9WJR5 959 aa18.39■□□□□ 0.53
APP-215ENST00000474136 EIF3LQ9Y262 564 aaKnown RBP18.39■□□□□ 0.53
APP-215ENST00000474136 MED12Q93074 2177 aa18.38■□□□□ 0.53
APP-215ENST00000474136 ERN1O75460 977 aaKnown RBP18.38■□□□□ 0.53
APP-215ENST00000474136 CPA2P48052 419 aa18.38■□□□□ 0.53
APP-215ENST00000474136 RAP1GDS1P52306 607 aa18.38■□□□□ 0.53
APP-215ENST00000474136 FBXW4P57775 412 aa18.38■□□□□ 0.53
APP-215ENST00000474136 HMGCS1Q01581 520 aa18.38■□□□□ 0.53
APP-215ENST00000474136 SF3B4Q15427 424 aaKnown RBP eCLIP18.38■□□□□ 0.53
APP-215ENST00000474136 GALNTL6Q49A17 601 aa18.38■□□□□ 0.53
APP-215ENST00000474136 WIPI1Q5MNZ9 446 aaPredicted RBP18.38■□□□□ 0.53
APP-215ENST00000474136 SLC29A4Q7RTT9 530 aa18.38■□□□□ 0.53
APP-215ENST00000474136 FNDC5Q8NAU1 212 aa18.38■□□□□ 0.53
APP-215ENST00000474136 PERPQ96FX8 193 aa18.38■□□□□ 0.53
APP-215ENST00000474136 RBM18Q96H35 190 aaKnown RBP18.38■□□□□ 0.53
APP-215ENST00000474136 LRRC37BQ96QE4 947 aa18.38■□□□□ 0.53
APP-215ENST00000474136 TBCDQ9BTW9 1192 aa18.38■□□□□ 0.53
APP-215ENST00000474136 SORBS1Q9BX66 1292 aaKnown RBP18.38■□□□□ 0.53
APP-215ENST00000474136 ROGDIQ9GZN7 287 aa18.38■□□□□ 0.53
APP-215ENST00000474136 ASIC5Q9NY37 505 aa18.38■□□□□ 0.53
APP-215ENST00000474136 ZKSCAN7Q9P0L1 754 aaPredicted RBP18.38■□□□□ 0.53
APP-215ENST00000474136 C15orf41Q9Y2V0 281 aa18.38■□□□□ 0.53
APP-215ENST00000474136 PTGDR2Q9Y5Y4 395 aa18.38■□□□□ 0.53
APP-215ENST00000474136 SPACA6W5XKT8 324 aa18.38■□□□□ 0.53
APP-215ENST00000474136 DOCK7Q96N67 2140 aa18.37■□□□□ 0.53
APP-215ENST00000474136 ANKRD33BA6NCL7 494 aa18.37■□□□□ 0.53
APP-215ENST00000474136 SAP18O00422 153 aaKnown RBP18.37■□□□□ 0.53
APP-215ENST00000474136 CASKO14936 926 aa18.37■□□□□ 0.53
APP-215ENST00000474136 SIAH2O43255 324 aa18.37■□□□□ 0.53
APP-215ENST00000474136 PRKRAO75569 313 aaKnown RBP18.37■□□□□ 0.53
APP-215ENST00000474136 PRPS2P11908 318 aa18.37■□□□□ 0.53
APP-215ENST00000474136 IDO1P14902 403 aa18.37■□□□□ 0.53
APP-215ENST00000474136 NCF2P19878 526 aaPredicted RBP18.37■□□□□ 0.53
APP-215ENST00000474136 HIST1H1TP22492 207 aaPredicted RBP18.37■□□□□ 0.53
APP-215ENST00000474136 GSTM5P46439 218 aa18.37■□□□□ 0.53
APP-215ENST00000474136 SF3A3Q12874 501 aaKnown RBP eCLIP18.37■□□□□ 0.53
APP-215ENST00000474136 ZNF267Q14586 743 aaPredicted RBP18.37■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms