RNA–Protein interactions for RNA: ENST00000473421.1

TRAF4-209, Transcript of TNF receptor associated factor 4, humanhuman

TSL 3

Gene TRAF4, Length 585 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-209ENST00000473421 CDKN1AP38936 164 aa11.3□□□□□ -0.6
TRAF4-209ENST00000473421 ARL1P40616 181 aaPredicted RBP11.3□□□□□ -0.6
TRAF4-209ENST00000473421 PSG6Q00889 435 aa11.3□□□□□ -0.6
TRAF4-209ENST00000473421 CPEB4Q17RY0 729 aaKnown RBP eCLIP11.3□□□□□ -0.6
TRAF4-209ENST00000473421 BEX5Q5H9J7 111 aa11.3□□□□□ -0.6
TRAF4-209ENST00000473421 LETMD1Q6P1Q0 360 aa11.3□□□□□ -0.6
TRAF4-209ENST00000473421 APOOLQ6UXV4 268 aa11.3□□□□□ -0.6
TRAF4-209ENST00000473421 FAM214BQ7L5A3 538 aa11.3□□□□□ -0.6
TRAF4-209ENST00000473421 CHMP1BQ7LBR1 199 aa11.3□□□□□ -0.6
TRAF4-209ENST00000473421 HIPK1Q86Z02 1210 aa11.3□□□□□ -0.6
TRAF4-209ENST00000473421 SLC44A2Q8IWA5 706 aaPredicted RBP11.3□□□□□ -0.6
TRAF4-209ENST00000473421 C1orf52Q8N6N3 182 aaKnown RBP11.3□□□□□ -0.6
TRAF4-209ENST00000473421 OR4F6Q8NGB9 312 aa11.3□□□□□ -0.6
TRAF4-209ENST00000473421 LRRC1Q9BTT6 524 aa11.3□□□□□ -0.6
TRAF4-209ENST00000473421 YAE1D1Q9NRH1 226 aa11.3□□□□□ -0.6
TRAF4-209ENST00000473421 PLSCR4Q9NRQ2 329 aa11.3□□□□□ -0.6
TRAF4-209ENST00000473421 PRODH2Q9UF12 536 aa11.3□□□□□ -0.6
TRAF4-209ENST00000473421 FREM1Q5H8C1 2179 aa11.3□□□□□ -0.6
TRAF4-209ENST00000473421 SYCE1LA8MT33 242 aa11.29□□□□□ -0.6
TRAF4-209ENST00000473421 ADAM11O75078 769 aa11.29□□□□□ -0.6
TRAF4-209ENST00000473421 IGHV4-39P01824 125 aa11.29□□□□□ -0.6
TRAF4-209ENST00000473421 ALDOAP04075 364 aaKnown RBP11.29□□□□□ -0.6
TRAF4-209ENST00000473421 THBS1P07996 1170 aa11.29□□□□□ -0.6
TRAF4-209ENST00000473421 DANCRP0C864 163 aa11.29□□□□□ -0.6
TRAF4-209ENST00000473421 EVI2BP34910 448 aa11.29□□□□□ -0.6
TRAF4-209ENST00000473421 CCNG1P51959 295 aa11.29□□□□□ -0.6
TRAF4-209ENST00000473421 CDH13P55290 713 aa11.29□□□□□ -0.6
TRAF4-209ENST00000473421 RAE1P78406 368 aaKnown RBP11.29□□□□□ -0.6
TRAF4-209ENST00000473421 ACAP2Q15057 778 aa11.29□□□□□ -0.6
TRAF4-209ENST00000473421 TECRLQ5HYJ1 363 aa11.29□□□□□ -0.6
TRAF4-209ENST00000473421 TTC19Q6DKK2 380 aaPredicted RBP11.29□□□□□ -0.6
TRAF4-209ENST00000473421 SCIMPQ6UWF3 145 aa11.29□□□□□ -0.6
TRAF4-209ENST00000473421 DNM1P46Q6ZS02 220 aa11.29□□□□□ -0.6
TRAF4-209ENST00000473421 MARCH3Q86UD3 253 aa11.29□□□□□ -0.6
TRAF4-209ENST00000473421 TRPC4APQ8TEL6 797 aa11.29□□□□□ -0.6
TRAF4-209ENST00000473421 DUSP19Q8WTR2 217 aa11.29□□□□□ -0.6
TRAF4-209ENST00000473421 ATP6V1E2Q96A05 226 aa11.29□□□□□ -0.6
TRAF4-209ENST00000473421 NTMT1Q9BV86 223 aa11.29□□□□□ -0.6
TRAF4-209ENST00000473421 CXorf56Q9H5V9 222 aa11.29□□□□□ -0.6
TRAF4-209ENST00000473421 PPP4R1LQ9P1A2 415 aa11.29□□□□□ -0.6
TRAF4-209ENST00000473421 GDF2Q9UK05 429 aaPredicted RBP11.29□□□□□ -0.6
TRAF4-209ENST00000473421 UTS2RQ9UKP6 389 aa11.29□□□□□ -0.6
TRAF4-209ENST00000473421 ZNF175Q9Y473 711 aa11.29□□□□□ -0.6
TRAF4-209ENST00000473421 A0A096LPK6 155 aa11.28□□□□□ -0.6
TRAF4-209ENST00000473421 PHF1O43189 567 aaPredicted RBP11.28□□□□□ -0.6
TRAF4-209ENST00000473421 KLHL2O95198 593 aa11.28□□□□□ -0.6
TRAF4-209ENST00000473421 IL3P08700 152 aa11.28□□□□□ -0.6
TRAF4-209ENST00000473421 PTNP21246 168 aa11.28□□□□□ -0.6
TRAF4-209ENST00000473421 IL12BP29460 328 aa11.28□□□□□ -0.6
TRAF4-209ENST00000473421 PNLIPRP2P54317 469 aa11.28□□□□□ -0.6
TRAF4-209ENST00000473421 ILF2Q12905 390 aaKnown RBP11.28□□□□□ -0.6
TRAF4-209ENST00000473421 FAM83EQ2M2I3 478 aa11.28□□□□□ -0.6
TRAF4-209ENST00000473421 TMEM44Q2T9K0 475 aa11.28□□□□□ -0.6
TRAF4-209ENST00000473421 LGSNQ5TDP6 509 aa11.28□□□□□ -0.6
TRAF4-209ENST00000473421 MFSD12Q6NUT3 480 aa11.28□□□□□ -0.6
TRAF4-209ENST00000473421 ZDHHC24Q6UX98 284 aa11.28□□□□□ -0.6
TRAF4-209ENST00000473421 PAGE2Q7Z2X7 111 aa11.28□□□□□ -0.6
TRAF4-209ENST00000473421 CCDC25Q86WR0 208 aa11.28□□□□□ -0.6
TRAF4-209ENST00000473421 METTL25Q8N6Q8 603 aa11.28□□□□□ -0.6
TRAF4-209ENST00000473421 UHMK1Q8TAS1 419 aaKnown RBP11.28□□□□□ -0.6
TRAF4-209ENST00000473421 ZNF675Q8TD23 568 aa11.28□□□□□ -0.6
TRAF4-209ENST00000473421 CAVIN3Q969G5 261 aa11.28□□□□□ -0.6
TRAF4-209ENST00000473421 EXOSC8Q96B26 276 aaKnown RBP11.28□□□□□ -0.6
TRAF4-209ENST00000473421 C1GALT1C1Q96EU7 318 aa11.28□□□□□ -0.6
TRAF4-209ENST00000473421 ERP44Q9BS26 406 aa11.28□□□□□ -0.6
TRAF4-209ENST00000473421 ACTR6Q9GZN1 396 aa11.28□□□□□ -0.6
TRAF4-209ENST00000473421 SLCO5A1Q9H2Y9 848 aa11.28□□□□□ -0.6
TRAF4-209ENST00000473421 KCNF1Q9H3M0 494 aa11.28□□□□□ -0.6
TRAF4-209ENST00000473421 MAGED1Q9Y5V3 778 aaPredicted RBP11.28□□□□□ -0.6
TRAF4-209ENST00000473421 YLPM1P49750 1951 aaKnown RBP11.28□□□□□ -0.6
TRAF4-209ENST00000473421 EIF3HO15372 352 aaKnown RBP eCLIP11.27□□□□□ -0.61
TRAF4-209ENST00000473421 RAD51CO43502 376 aa11.27□□□□□ -0.61
TRAF4-209ENST00000473421 CD5LO43866 347 aa11.27□□□□□ -0.61
TRAF4-209ENST00000473421 ABCB7O75027 752 aa11.27□□□□□ -0.61
TRAF4-209ENST00000473421 IGKV1D-16P01601 117 aa11.27□□□□□ -0.61
TRAF4-209ENST00000473421 CD8AP01732 235 aa11.27□□□□□ -0.61
TRAF4-209ENST00000473421 SBK3P0C264 359 aa11.27□□□□□ -0.61
TRAF4-209ENST00000473421 MAGEA4P43358 317 aa11.27□□□□□ -0.61
TRAF4-209ENST00000473421 RPS4XP62701 263 aaKnown RBP11.27□□□□□ -0.61
TRAF4-209ENST00000473421 GUCY2DQ02846 1103 aa11.27□□□□□ -0.61
TRAF4-209ENST00000473421 IFT88Q13099 833 aa11.27□□□□□ -0.61
TRAF4-209ENST00000473421 EFR3AQ14156 821 aa11.27□□□□□ -0.61
TRAF4-209ENST00000473421 PGGHGQ32M88 737 aa11.27□□□□□ -0.61
TRAF4-209ENST00000473421 KRTAP24-1Q3LI83 254 aa11.27□□□□□ -0.61
TRAF4-209ENST00000473421 SH2D4BQ5SQS7 431 aa11.27□□□□□ -0.61
TRAF4-209ENST00000473421 PPP4R4Q6NUP7 873 aa11.27□□□□□ -0.61
TRAF4-209ENST00000473421 SEZ6L2Q6UXD5 910 aa11.27□□□□□ -0.61
TRAF4-209ENST00000473421 MILR1Q7Z6M3 343 aa11.27□□□□□ -0.61
TRAF4-209ENST00000473421 ZNF619Q8N2I2 560 aa11.27□□□□□ -0.61
TRAF4-209ENST00000473421 VPS11Q9H270 941 aa11.27□□□□□ -0.61
TRAF4-209ENST00000473421 C12orf49Q9H741 205 aa11.27□□□□□ -0.61
TRAF4-209ENST00000473421 PFDN4Q9NQP4 134 aa11.27□□□□□ -0.61
TRAF4-209ENST00000473421 AHSPQ9NZD4 102 aa11.27□□□□□ -0.61
TRAF4-209ENST00000473421 WHRNQ9P202 907 aa11.27□□□□□ -0.61
TRAF4-209ENST00000473421 LIPT1Q9Y234 373 aa11.27□□□□□ -0.61
TRAF4-209ENST00000473421 TNPO3Q9Y5L0 923 aaKnown RBP11.27□□□□□ -0.61
TRAF4-209ENST00000473421 ZNF780BQ9Y6R6 833 aa11.27□□□□□ -0.61
TRAF4-209ENST00000473421 A0A096LNT2 108 aa11.26□□□□□ -0.61
TRAF4-209ENST00000473421 EIF1AYO14602 144 aaKnown RBP11.26□□□□□ -0.61
TRAF4-209ENST00000473421 CLOCKO15516 846 aa11.26□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms