RNA–Protein interactions for RNA: ENST00000472892.1

VTI1A-203, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 1 (best)

Gene VTI1A, Length 1,247 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-203ENST00000472892 EGLN2Q96KS0 407 aa13.86□□□□□ -0.19
VTI1A-203ENST00000472892 SFXN2Q96NB2 322 aa13.86□□□□□ -0.19
VTI1A-203ENST00000472892 FOXC2Q99958 501 aa13.86□□□□□ -0.19
VTI1A-203ENST00000472892 SFXN3Q9BWM7 321 aa13.86□□□□□ -0.19
VTI1A-203ENST00000472892 CXXC4Q9H2H0 198 aa13.86□□□□□ -0.19
VTI1A-203ENST00000472892 LIME1Q9H400 295 aa13.86□□□□□ -0.19
VTI1A-203ENST00000472892 CLCF1Q9UBD9 225 aa13.86□□□□□ -0.19
VTI1A-203ENST00000472892 ANKHD1Q8IWZ3 2542 aaKnown RBP13.86□□□□□ -0.19
VTI1A-203ENST00000472892 MED12Q93074 2177 aa13.85□□□□□ -0.19
VTI1A-203ENST00000472892 SLC28A1O00337 649 aa13.85□□□□□ -0.19
VTI1A-203ENST00000472892 COPEO14579 308 aa13.85□□□□□ -0.19
VTI1A-203ENST00000472892 SEC22BO75396 215 aa13.85□□□□□ -0.19
VTI1A-203ENST00000472892 KRT4P19013 534 aa13.85□□□□□ -0.19
VTI1A-203ENST00000472892 TACR1P25103 407 aa13.85□□□□□ -0.19
VTI1A-203ENST00000472892 NTSP30990 170 aa13.85□□□□□ -0.19
VTI1A-203ENST00000472892 EVI2BP34910 448 aa13.85□□□□□ -0.19
VTI1A-203ENST00000472892 EEF1A1P68104 462 aaKnown RBP13.85□□□□□ -0.19
VTI1A-203ENST00000472892 EEF1A1P5Q5VTE0 462 aa13.85□□□□□ -0.19
VTI1A-203ENST00000472892 LIPMQ5VYY2 423 aa13.85□□□□□ -0.19
VTI1A-203ENST00000472892 Q6ZSR9 355 aa13.85□□□□□ -0.19
VTI1A-203ENST00000472892 CDC20BQ86Y33 519 aa13.85□□□□□ -0.19
VTI1A-203ENST00000472892 OR2M3Q8NG83 312 aa13.85□□□□□ -0.19
VTI1A-203ENST00000472892 LINC01560Q8TB33 94 aa13.85□□□□□ -0.19
VTI1A-203ENST00000472892 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP13.85□□□□□ -0.19
VTI1A-203ENST00000472892 LMF2Q9BU23 707 aaKnown RBP13.85□□□□□ -0.19
VTI1A-203ENST00000472892 DSN1Q9H410 356 aa13.85□□□□□ -0.19
VTI1A-203ENST00000472892 DDX18Q9NVP1 670 aaKnown RBP13.85□□□□□ -0.19
VTI1A-203ENST00000472892 PPP4R1LQ9P1A2 415 aa13.85□□□□□ -0.19
VTI1A-203ENST00000472892 ST6GALNAC2Q9UJ37 374 aa13.85□□□□□ -0.19
VTI1A-203ENST00000472892 DKKL1Q9UK85 242 aa13.85□□□□□ -0.19
VTI1A-203ENST00000472892 ABCG2Q9UNQ0 655 aa13.85□□□□□ -0.19
VTI1A-203ENST00000472892 SMIM23A6NLE4 172 aa13.84□□□□□ -0.19
VTI1A-203ENST00000472892 C17orf51A8MQB3 221 aa13.84□□□□□ -0.19
VTI1A-203ENST00000472892 EEF1E1-BLOC1S5C9J1V9 151 aa13.84□□□□□ -0.19
VTI1A-203ENST00000472892 EEF1E1O43324 174 aaKnown RBP13.84□□□□□ -0.19
VTI1A-203ENST00000472892 HCRTR2O43614 444 aa13.84□□□□□ -0.19
VTI1A-203ENST00000472892 IL33O95760 270 aa13.84□□□□□ -0.19
VTI1A-203ENST00000472892 DECR1Q16698 335 aa13.84□□□□□ -0.19
VTI1A-203ENST00000472892 SH2D4BQ5SQS7 431 aa13.84□□□□□ -0.19
VTI1A-203ENST00000472892 CLEC6AQ6EIG7 209 aa13.84□□□□□ -0.19
VTI1A-203ENST00000472892 PLXDC2Q6UX71 529 aa13.84□□□□□ -0.19
VTI1A-203ENST00000472892 RNF165Q6ZSG1 346 aa13.84□□□□□ -0.19
VTI1A-203ENST00000472892 C10orf107Q8IVU9 208 aa13.84□□□□□ -0.19
VTI1A-203ENST00000472892 CCDC63Q8NA47 563 aa13.84□□□□□ -0.19
VTI1A-203ENST00000472892 OR4K17Q8NGC6 315 aa13.84□□□□□ -0.19
VTI1A-203ENST00000472892 GOT1L1Q8NHS2 421 aaPredicted RBP13.84□□□□□ -0.19
VTI1A-203ENST00000472892 EPS8L3Q8TE67 593 aaKnown RBP13.84□□□□□ -0.19
VTI1A-203ENST00000472892 HOXB13Q92826 284 aaPredicted RBP13.84□□□□□ -0.19
VTI1A-203ENST00000472892 INTS12Q96CB8 462 aaKnown RBP13.84□□□□□ -0.19
VTI1A-203ENST00000472892 ZNF764Q96H86 408 aaPredicted RBP13.84□□□□□ -0.19
VTI1A-203ENST00000472892 FCRL1Q96LA6 429 aa13.84□□□□□ -0.19
VTI1A-203ENST00000472892 GATA5Q9BWX5 397 aaPredicted RBP13.84□□□□□ -0.19
VTI1A-203ENST00000472892 RTN4RQ9BZR6 473 aa13.84□□□□□ -0.19
VTI1A-203ENST00000472892 ACBD3Q9H3P7 528 aa13.84□□□□□ -0.19
VTI1A-203ENST00000472892 LRTM1Q9HBL6 345 aa13.84□□□□□ -0.19
VTI1A-203ENST00000472892 Q9N2J8 555 aa13.84□□□□□ -0.19
VTI1A-203ENST00000472892 SDHAF3Q9NRP4 125 aa13.84□□□□□ -0.19
VTI1A-203ENST00000472892 CCM2LQ9NUG4 571 aaPredicted RBP13.84□□□□□ -0.19
VTI1A-203ENST00000472892 C1orf109Q9NX04 203 aa13.84□□□□□ -0.19
VTI1A-203ENST00000472892 FAM120CQ9NX05 1096 aaKnown RBP13.84□□□□□ -0.19
VTI1A-203ENST00000472892 FLRT3Q9NZU0 649 aa13.84□□□□□ -0.19
VTI1A-203ENST00000472892 MRTO4Q9UKD2 239 aaKnown RBP13.84□□□□□ -0.19
VTI1A-203ENST00000472892 EDARQ9UNE0 448 aa13.84□□□□□ -0.19
VTI1A-203ENST00000472892 RPH3AQ9Y2J0 694 aaPredicted RBP13.84□□□□□ -0.19
VTI1A-203ENST00000472892 DOCK7Q96N67 2140 aa13.84□□□□□ -0.19
VTI1A-203ENST00000472892 MED13LQ71F56 2210 aa13.83□□□□□ -0.2
VTI1A-203ENST00000472892 TTC36A6NLP5 189 aa13.83□□□□□ -0.2
VTI1A-203ENST00000472892 AZIN1O14977 448 aa13.83□□□□□ -0.2
VTI1A-203ENST00000472892 RGS14O43566 566 aa13.83□□□□□ -0.2
VTI1A-203ENST00000472892 SCO2O43819 266 aa13.83□□□□□ -0.2
VTI1A-203ENST00000472892 TBX19O60806 448 aa13.83□□□□□ -0.2
VTI1A-203ENST00000472892 TRIM13O60858 407 aa13.83□□□□□ -0.2
VTI1A-203ENST00000472892 TGM6O95932 706 aa13.83□□□□□ -0.2
VTI1A-203ENST00000472892 PEPDP12955 493 aa13.83□□□□□ -0.2
VTI1A-203ENST00000472892 MAP3K8P41279 467 aa13.83□□□□□ -0.2
VTI1A-203ENST00000472892 PSMD4P55036 377 aaKnown RBP13.83□□□□□ -0.2
VTI1A-203ENST00000472892 ZNHIT3Q15649 155 aaPredicted RBP13.83□□□□□ -0.2
VTI1A-203ENST00000472892 ZNF551Q7Z340 670 aaPredicted RBP13.83□□□□□ -0.2
VTI1A-203ENST00000472892 C4orf33Q8N1A6 199 aa13.83□□□□□ -0.2
VTI1A-203ENST00000472892 DUSP19Q8WTR2 217 aa13.83□□□□□ -0.2
VTI1A-203ENST00000472892 RMND5BQ96G75 393 aaPredicted RBP13.83□□□□□ -0.2
VTI1A-203ENST00000472892 TRMOQ9BU70 441 aa13.83□□□□□ -0.2
VTI1A-203ENST00000472892 RBM24Q9BX46 236 aaKnown RBP13.83□□□□□ -0.2
VTI1A-203ENST00000472892 PIGMQ9H3S5 423 aa13.83□□□□□ -0.2
VTI1A-203ENST00000472892 TUBB1Q9H4B7 451 aa13.83□□□□□ -0.2
VTI1A-203ENST00000472892 L2HGDHQ9H9P8 463 aa13.83□□□□□ -0.2
VTI1A-203ENST00000472892 MED11Q9P086 117 aa13.83□□□□□ -0.2
VTI1A-203ENST00000472892 MID2Q9UJV3 735 aa13.83□□□□□ -0.2
VTI1A-203ENST00000472892 PTGDR2Q9Y5Y4 395 aa13.83□□□□□ -0.2
VTI1A-203ENST00000472892 TNFSF12-TNFSF13A0A0A6YY99 330 aa13.82□□□□□ -0.2
VTI1A-203ENST00000472892 A8MXE2 369 aa13.82□□□□□ -0.2
VTI1A-203ENST00000472892 LINC01387J3KSC0 135 aa13.82□□□□□ -0.2
VTI1A-203ENST00000472892 TNFSF13O75888 250 aa13.82□□□□□ -0.2
VTI1A-203ENST00000472892 GOSR1O95249 250 aa13.82□□□□□ -0.2
VTI1A-203ENST00000472892 CRHP06850 196 aa13.82□□□□□ -0.2
VTI1A-203ENST00000472892 FGF4P08620 206 aa13.82□□□□□ -0.2
VTI1A-203ENST00000472892 PRPS2P11908 318 aa13.82□□□□□ -0.2
VTI1A-203ENST00000472892 HK1P19367 917 aa13.82□□□□□ -0.2
VTI1A-203ENST00000472892 TCEA1P23193 301 aaKnown RBP13.82□□□□□ -0.2
VTI1A-203ENST00000472892 GABRA3P34903 492 aa13.82□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms