RNA–Protein interactions for RNA: ENST00000472096.1

CALD1-215, Transcript of caldesmon 1, human

TSL 2

Gene CALD1, Length 651 nt, Biotype retained intron, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CALD1-215	ENST00000472096	EQTN	Q9NQ60	294 aa		13.76	□□□□□ -0.21
CALD1-215	ENST00000472096	PNPLA3	Q9NST1	481 aa		13.76	□□□□□ -0.21
CALD1-215	ENST00000472096	SIRT3	Q9NTG7	399 aa	Predicted RBP	13.76	□□□□□ -0.21
CALD1-215	ENST00000472096	ATAD3A	Q9NVI7	634 aa		13.76	□□□□□ -0.21
CALD1-215	ENST00000472096	PNPO	Q9NVS9	261 aa		13.76	□□□□□ -0.21
CALD1-215	ENST00000472096	NTM	Q9P121	344 aa		13.76	□□□□□ -0.21
CALD1-215	ENST00000472096	TNFRSF10D	Q9UBN6	386 aa		13.76	□□□□□ -0.21
CALD1-215	ENST00000472096	CBLC	Q9ULV8	474 aa		13.76	□□□□□ -0.21
CALD1-215	ENST00000472096	GIMAP1-GIMAP5	A0A087WTJ2	511 aa		13.75	□□□□□ -0.21
CALD1-215	ENST00000472096	TTC36	A6NLP5	189 aa		13.75	□□□□□ -0.21
CALD1-215	ENST00000472096	HPN	P05981	417 aa		13.75	□□□□□ -0.21
CALD1-215	ENST00000472096	CYP4B1	P13584	511 aa		13.75	□□□□□ -0.21
CALD1-215	ENST00000472096	PRPS1L1	P21108	318 aa		13.75	□□□□□ -0.21
CALD1-215	ENST00000472096	SMS	P52788	366 aa		13.75	□□□□□ -0.21
CALD1-215	ENST00000472096	MRPS22	P82650	360 aa	Known RBP	13.75	□□□□□ -0.21
CALD1-215	ENST00000472096	CYP27C1	Q4G0S4	372 aa		13.75	□□□□□ -0.21
CALD1-215	ENST00000472096	CPTP	Q5TA50	214 aa		13.75	□□□□□ -0.21
CALD1-215	ENST00000472096	LRRC34	Q8IZ02	419 aa		13.75	□□□□□ -0.21
CALD1-215	ENST00000472096	MARVELD2	Q8N4S9	558 aa		13.75	□□□□□ -0.21
CALD1-215	ENST00000472096	NUP43	Q8NFH3	380 aa		13.75	□□□□□ -0.21
CALD1-215	ENST00000472096	OR1J4	Q8NGS1	313 aa		13.75	□□□□□ -0.21
CALD1-215	ENST00000472096	NEIL3	Q8TAT5	605 aa		13.75	□□□□□ -0.21
CALD1-215	ENST00000472096	NUDT8	Q8WV74	236 aa		13.75	□□□□□ -0.21
CALD1-215	ENST00000472096	COQ8B	Q96D53	544 aa		13.75	□□□□□ -0.21
CALD1-215	ENST00000472096	GIMAP5	Q96F15	307 aa		13.75	□□□□□ -0.21
CALD1-215	ENST00000472096	GNRHR2	Q96P88	292 aa		13.75	□□□□□ -0.21
CALD1-215	ENST00000472096	THAP1	Q9NVV9	213 aa		13.75	□□□□□ -0.21
CALD1-215	ENST00000472096	MAPRE3	Q9UPY8	281 aa		13.75	□□□□□ -0.21
CALD1-215	ENST00000472096	WIF1	Q9Y5W5	379 aa		13.75	□□□□□ -0.21
CALD1-215	ENST00000472096		A0A1W2PRB8	838 aa		13.74	□□□□□ -0.21
CALD1-215	ENST00000472096	FIGNL2	A6NMB9	653 aa		13.74	□□□□□ -0.21
CALD1-215	ENST00000472096	SDHD	O14521	159 aa		13.74	□□□□□ -0.21
CALD1-215	ENST00000472096	EMC8	O43402	210 aa		13.74	□□□□□ -0.21
CALD1-215	ENST00000472096	H2AFX	P16104	143 aa	Predicted RBP	13.74	□□□□□ -0.21
CALD1-215	ENST00000472096	AGA	P20933	346 aa		13.74	□□□□□ -0.21
CALD1-215	ENST00000472096	COL8A1	P27658	744 aa		13.74	□□□□□ -0.21
CALD1-215	ENST00000472096	MAP3K8	P41279	467 aa		13.74	□□□□□ -0.21
CALD1-215	ENST00000472096	TRPC1	P48995	793 aa		13.74	□□□□□ -0.21
CALD1-215	ENST00000472096	PRKAG1	P54619	331 aa		13.74	□□□□□ -0.21
CALD1-215	ENST00000472096	DIO3	P55073	304 aa		13.74	□□□□□ -0.21
CALD1-215	ENST00000472096	CLDN8	P56748	225 aa		13.74	□□□□□ -0.21
CALD1-215	ENST00000472096	GAB1	Q13480	694 aa		13.74	□□□□□ -0.21
CALD1-215	ENST00000472096	ART3	Q13508	389 aa		13.74	□□□□□ -0.21
CALD1-215	ENST00000472096	DECR1	Q16698	335 aa		13.74	□□□□□ -0.21
CALD1-215	ENST00000472096	GXYLT1	Q4G148	440 aa		13.74	□□□□□ -0.21
CALD1-215	ENST00000472096	ATG16L1	Q676U5	607 aa		13.74	□□□□□ -0.21
CALD1-215	ENST00000472096	MFSD12	Q6NUT3	480 aa		13.74	□□□□□ -0.21
CALD1-215	ENST00000472096	CAMKMT	Q7Z624	323 aa		13.74	□□□□□ -0.21
CALD1-215	ENST00000472096	TRIM42	Q8IWZ5	723 aa		13.74	□□□□□ -0.21
CALD1-215	ENST00000472096	RPRML	Q8N4K4	120 aa		13.74	□□□□□ -0.21
CALD1-215	ENST00000472096	NATD1	Q8N6N6	113 aa		13.74	□□□□□ -0.21
CALD1-215	ENST00000472096	CDRT4	Q8N9R6	151 aa		13.74	□□□□□ -0.21
CALD1-215	ENST00000472096	OR5M9	Q8NGP3	310 aa		13.74	□□□□□ -0.21
CALD1-215	ENST00000472096	CEP70	Q8NHQ1	597 aa		13.74	□□□□□ -0.21
CALD1-215	ENST00000472096	FAM120B	Q96EK7	910 aa	Known RBP	13.74	□□□□□ -0.21
CALD1-215	ENST00000472096	PRPF18	Q99633	342 aa	Known RBP	13.74	□□□□□ -0.21
CALD1-215	ENST00000472096	BHLHE41	Q9C0J9	482 aa	Predicted RBP	13.74	□□□□□ -0.21
CALD1-215	ENST00000472096	C3orf14	Q9HBI5	128 aa		13.74	□□□□□ -0.21
CALD1-215	ENST00000472096	ARGLU1	Q9NWB6	273 aa	Predicted RBP	13.74	□□□□□ -0.21
CALD1-215	ENST00000472096	HCFC1	P51610	2035 aa		13.74	□□□□□ -0.21
CALD1-215	ENST00000472096	KIAA1549	Q9HCM3	1950 aa		13.74	□□□□□ -0.21
CALD1-215	ENST00000472096	NBPF19	A0A087WUL8	3843 aa		13.74	□□□□□ -0.21
CALD1-215	ENST00000472096	C15orf38-AP3S2	A0A0A6YYH1	394 aa		13.73	□□□□□ -0.21
CALD1-215	ENST00000472096	GXYLT2	A0PJZ3	443 aa		13.73	□□□□□ -0.21
CALD1-215	ENST00000472096	TRAPPC6A	O75865	159 aa		13.73	□□□□□ -0.21
CALD1-215	ENST00000472096	NKX2-2	O95096	273 aa		13.73	□□□□□ -0.21
CALD1-215	ENST00000472096	IL33	O95760	270 aa		13.73	□□□□□ -0.21
CALD1-215	ENST00000472096	C6orf47	O95873	294 aa		13.73	□□□□□ -0.21
CALD1-215	ENST00000472096	ACP2	P11117	423 aa		13.73	□□□□□ -0.21
CALD1-215	ENST00000472096	LBP	P18428	481 aa		13.73	□□□□□ -0.21
CALD1-215	ENST00000472096	ACVR2A	P27037	513 aa		13.73	□□□□□ -0.21
CALD1-215	ENST00000472096	GABRA3	P34903	492 aa		13.73	□□□□□ -0.21
CALD1-215	ENST00000472096	EVI2B	P34910	448 aa		13.73	□□□□□ -0.21
CALD1-215	ENST00000472096	GAS1	P54826	345 aa		13.73	□□□□□ -0.21
CALD1-215	ENST00000472096	PRR5	P85299	388 aa		13.73	□□□□□ -0.21
CALD1-215	ENST00000472096	OCRL	Q01968	901 aa		13.73	□□□□□ -0.21
CALD1-215	ENST00000472096	CRYZ	Q08257	329 aa	Known RBP	13.73	□□□□□ -0.21
CALD1-215	ENST00000472096	VPS26B	Q4G0F5	336 aa		13.73	□□□□□ -0.21
CALD1-215	ENST00000472096	TTMP	Q5BVD1	217 aa		13.73	□□□□□ -0.21
CALD1-215	ENST00000472096	EXOSC6	Q5RKV6	272 aa	Known RBP	13.73	□□□□□ -0.21
CALD1-215	ENST00000472096	WLS	Q5T9L3	541 aa		13.73	□□□□□ -0.21
CALD1-215	ENST00000472096	OGFOD2	Q6N063	350 aa		13.73	□□□□□ -0.21
CALD1-215	ENST00000472096	XKRX	Q6PP77	449 aa		13.73	□□□□□ -0.21
CALD1-215	ENST00000472096	WDSUB1	Q8N9V3	476 aa		13.73	□□□□□ -0.21
CALD1-215	ENST00000472096	PSMA8	Q8TAA3	256 aa		13.73	□□□□□ -0.21
CALD1-215	ENST00000472096	FBXO30	Q8TB52	745 aa		13.73	□□□□□ -0.21
CALD1-215	ENST00000472096	OR5P2	Q8WZ92	322 aa		13.73	□□□□□ -0.21
CALD1-215	ENST00000472096	PIK3R3	Q92569	461 aa		13.73	□□□□□ -0.21
CALD1-215	ENST00000472096	RMND5B	Q96G75	393 aa	Predicted RBP	13.73	□□□□□ -0.21
CALD1-215	ENST00000472096	ATP6V1G3	Q96LB4	118 aa		13.73	□□□□□ -0.21
CALD1-215	ENST00000472096	DUSP26	Q9BV47	211 aa		13.73	□□□□□ -0.21
CALD1-215	ENST00000472096	MANSC1	Q9H8J5	431 aa		13.73	□□□□□ -0.21
CALD1-215	ENST00000472096	NEUROD4	Q9HD90	331 aa		13.73	□□□□□ -0.21
CALD1-215	ENST00000472096	SERHL	Q9NQF3	203 aa		13.73	□□□□□ -0.21
CALD1-215	ENST00000472096	ZCCHC3	Q9NUD5	404 aa	Known RBP	13.73	□□□□□ -0.21
CALD1-215	ENST00000472096	FLRT3	Q9NZU0	649 aa		13.73	□□□□□ -0.21
CALD1-215	ENST00000472096	MARCO	Q9UEW3	520 aa	Predicted RBP	13.73	□□□□□ -0.21
CALD1-215	ENST00000472096	MRTO4	Q9UKD2	239 aa	Known RBP	13.73	□□□□□ -0.21
CALD1-215	ENST00000472096	ACAD8	Q9UKU7	415 aa		13.73	□□□□□ -0.21
CALD1-215	ENST00000472096	ABCG2	Q9UNQ0	655 aa		13.73	□□□□□ -0.21

Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms