RNA–Protein interactions for RNA: ENST00000471260.1

HMGN1-211, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3

Gene HMGN1, Length 615 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-211ENST00000471260 TAS2R9Q9NYW1 312 aa12.34□□□□□ -0.43
HMGN1-211ENST00000471260 TAS2R7Q9NYW3 318 aa12.34□□□□□ -0.43
HMGN1-211ENST00000471260 TAS2R1Q9NYW7 299 aa12.34□□□□□ -0.43
HMGN1-211ENST00000471260 Q9UFV3 132 aa12.34□□□□□ -0.43
HMGN1-211ENST00000471260 LRCH1Q9Y2L9 728 aa12.34□□□□□ -0.43
HMGN1-211ENST00000471260 ADGRG4Q8IZF6 3080 aa12.34□□□□□ -0.43
HMGN1-211ENST00000471260 HCFC1P51610 2035 aa12.33□□□□□ -0.43
HMGN1-211ENST00000471260 APCP25054 2843 aa12.33□□□□□ -0.44
HMGN1-211ENST00000471260 C15orf38-AP3S2A0A0A6YYH1 394 aa12.33□□□□□ -0.44
HMGN1-211ENST00000471260 NKX2-6A6NCS4 301 aa12.33□□□□□ -0.44
HMGN1-211ENST00000471260 SNPHO15079 494 aa12.33□□□□□ -0.44
HMGN1-211ENST00000471260 SLC22A2O15244 555 aa12.33□□□□□ -0.44
HMGN1-211ENST00000471260 FKBP6O75344 327 aa12.33□□□□□ -0.44
HMGN1-211ENST00000471260 CRCPO75575 148 aa12.33□□□□□ -0.44
HMGN1-211ENST00000471260 CBR3O75828 277 aa12.33□□□□□ -0.44
HMGN1-211ENST00000471260 RSL1D1O76021 490 aaKnown RBP12.33□□□□□ -0.44
HMGN1-211ENST00000471260 LRATO95237 230 aa12.33□□□□□ -0.44
HMGN1-211ENST00000471260 PSMG1O95456 288 aa12.33□□□□□ -0.44
HMGN1-211ENST00000471260 EPPINO95925 133 aa12.33□□□□□ -0.44
HMGN1-211ENST00000471260 UROSP10746 265 aa12.33□□□□□ -0.44
HMGN1-211ENST00000471260 DDCP20711 480 aa12.33□□□□□ -0.44
HMGN1-211ENST00000471260 PTPN6P29350 595 aa12.33□□□□□ -0.44
HMGN1-211ENST00000471260 TIMP3P35625 211 aa12.33□□□□□ -0.44
HMGN1-211ENST00000471260 BTKQ06187 659 aa12.33□□□□□ -0.44
HMGN1-211ENST00000471260 CRYZQ08257 329 aaKnown RBP12.33□□□□□ -0.44
HMGN1-211ENST00000471260 LTB4RQ15722 352 aa12.33□□□□□ -0.44
HMGN1-211ENST00000471260 IMPG1Q17R60 797 aa12.33□□□□□ -0.44
HMGN1-211ENST00000471260 BICRALQ6AI39 1079 aa12.33□□□□□ -0.44
HMGN1-211ENST00000471260 VASNQ6EMK4 673 aa12.33□□□□□ -0.44
HMGN1-211ENST00000471260 FAM9CQ8IZT9 166 aa12.33□□□□□ -0.44
HMGN1-211ENST00000471260 KCNA7Q96RP8 456 aa12.33□□□□□ -0.44
HMGN1-211ENST00000471260 TIMP4Q99727 224 aa12.33□□□□□ -0.44
HMGN1-211ENST00000471260 CCDC106Q9BWC9 280 aa12.33□□□□□ -0.44
HMGN1-211ENST00000471260 OSBPL11Q9BXB4 747 aa12.33□□□□□ -0.44
HMGN1-211ENST00000471260 PRDM14Q9GZV8 571 aa12.33□□□□□ -0.44
HMGN1-211ENST00000471260 NPDC1Q9NQX5 325 aaPredicted RBP12.33□□□□□ -0.44
HMGN1-211ENST00000471260 OXSMQ9NWU1 459 aa12.33□□□□□ -0.44
HMGN1-211ENST00000471260 KCNN3Q9UGI6 736 aa12.33□□□□□ -0.44
HMGN1-211ENST00000471260 EXO1Q9UQ84 846 aaKnown RBP12.33□□□□□ -0.44
HMGN1-211ENST00000471260 INTS1Q8N201 2190 aaKnown RBP12.33□□□□□ -0.44
HMGN1-211ENST00000471260 NCKAP5O14513 1909 aa12.33□□□□□ -0.44
HMGN1-211ENST00000471260 EXPH5Q8NEV8 1989 aa12.32□□□□□ -0.44
HMGN1-211ENST00000471260 A0A087WV62 115 aa12.32□□□□□ -0.44
HMGN1-211ENST00000471260 NPIPB8E9PQR5 432 aa12.32□□□□□ -0.44
HMGN1-211ENST00000471260 ICOSLGO75144 302 aa12.32□□□□□ -0.44
HMGN1-211ENST00000471260 UGT2B11O75310 529 aa12.32□□□□□ -0.44
HMGN1-211ENST00000471260 ERN1O75460 977 aaKnown RBP12.32□□□□□ -0.44
HMGN1-211ENST00000471260 ACTL6AO96019 429 aa12.32□□□□□ -0.44
HMGN1-211ENST00000471260 CPA3P15088 417 aa12.32□□□□□ -0.44
HMGN1-211ENST00000471260 PRPH2P23942 346 aa12.32□□□□□ -0.44
HMGN1-211ENST00000471260 PGM1P36871 562 aa12.32□□□□□ -0.44
HMGN1-211ENST00000471260 PTDSS1P48651 473 aaKnown RBP12.32□□□□□ -0.44
HMGN1-211ENST00000471260 TRPC1P48995 793 aa12.32□□□□□ -0.44
HMGN1-211ENST00000471260 AQP5P55064 265 aa12.32□□□□□ -0.44
HMGN1-211ENST00000471260 FOXA1P55317 472 aa12.32□□□□□ -0.44
HMGN1-211ENST00000471260 MRPS22P82650 360 aaKnown RBP12.32□□□□□ -0.44
HMGN1-211ENST00000471260 TLE4Q04727 773 aa12.32□□□□□ -0.44
HMGN1-211ENST00000471260 SLC34A1Q06495 639 aa12.32□□□□□ -0.44
HMGN1-211ENST00000471260 C2orf80Q0P641 193 aa12.32□□□□□ -0.44
HMGN1-211ENST00000471260 EFR3AQ14156 821 aa12.32□□□□□ -0.44
HMGN1-211ENST00000471260 PCLAFQ15004 111 aa12.32□□□□□ -0.44
HMGN1-211ENST00000471260 NNATQ16517 81 aa12.32□□□□□ -0.44
HMGN1-211ENST00000471260 GSTA3Q16772 222 aa12.32□□□□□ -0.44
HMGN1-211ENST00000471260 LIPMQ5VYY2 423 aa12.32□□□□□ -0.44
HMGN1-211ENST00000471260 METTL21CQ5VZV1 264 aa12.32□□□□□ -0.44
HMGN1-211ENST00000471260 FAM180BQ6P0A1 224 aa12.32□□□□□ -0.44
HMGN1-211ENST00000471260 AAGABQ6PD74 315 aa12.32□□□□□ -0.44
HMGN1-211ENST00000471260 RNF165Q6ZSG1 346 aa12.32□□□□□ -0.44
HMGN1-211ENST00000471260 IKBIPQ70UQ0 350 aa12.32□□□□□ -0.44
HMGN1-211ENST00000471260 LACC1Q8IV20 430 aa12.32□□□□□ -0.44
HMGN1-211ENST00000471260 SIMC1Q8NDZ2 872 aa12.32□□□□□ -0.44
HMGN1-211ENST00000471260 OR9A2Q8NGT5 310 aa12.32□□□□□ -0.44
HMGN1-211ENST00000471260 OR6Y1Q8NGX8 325 aa12.32□□□□□ -0.44
HMGN1-211ENST00000471260 PUM2Q8TB72 1066 aaKnown RBP eCLIP12.32□□□□□ -0.44
HMGN1-211ENST00000471260 DNAJC9Q8WXX5 260 aa12.32□□□□□ -0.44
HMGN1-211ENST00000471260 EXOSC8Q96B26 276 aaKnown RBP12.32□□□□□ -0.44
HMGN1-211ENST00000471260 SLC35A4Q96G79 324 aa12.32□□□□□ -0.44
HMGN1-211ENST00000471260 VSTM2LQ96N03 204 aa12.32□□□□□ -0.44
HMGN1-211ENST00000471260 COL21A1Q96P44 957 aa12.32□□□□□ -0.44
HMGN1-211ENST00000471260 BBS4Q96RK4 519 aa12.32□□□□□ -0.44
HMGN1-211ENST00000471260 NODALQ96S42 347 aa12.32□□□□□ -0.44
HMGN1-211ENST00000471260 TRMOQ9BU70 441 aa12.32□□□□□ -0.44
HMGN1-211ENST00000471260 CCDC28BQ9BUN5 200 aa12.32□□□□□ -0.44
HMGN1-211ENST00000471260 MECRQ9BV79 373 aa12.32□□□□□ -0.44
HMGN1-211ENST00000471260 C12orf65Q9H3J6 166 aaKnown RBP12.32□□□□□ -0.44
HMGN1-211ENST00000471260 MYNNQ9NPC7 610 aa12.32□□□□□ -0.44
HMGN1-211ENST00000471260 MIEF1Q9NQG6 463 aa12.32□□□□□ -0.44
HMGN1-211ENST00000471260 KLRF1Q9NZS2 232 aa12.32□□□□□ -0.44
HMGN1-211ENST00000471260 ZNF629Q9UEG4 869 aaPredicted RBP12.32□□□□□ -0.44
HMGN1-211ENST00000471260 FREM3P0C091 2139 aa12.32□□□□□ -0.44
HMGN1-211ENST00000471260 PRAMEF25A6NGN4 478 aa12.31□□□□□ -0.44
HMGN1-211ENST00000471260 MYO1GB0I1T2 1018 aa12.31□□□□□ -0.44
HMGN1-211ENST00000471260 PLOD2O00469 737 aa12.31□□□□□ -0.44
HMGN1-211ENST00000471260 COQ9O75208 318 aa12.31□□□□□ -0.44
HMGN1-211ENST00000471260 REM1O75628 298 aa12.31□□□□□ -0.44
HMGN1-211ENST00000471260 IFI6P09912 130 aa12.31□□□□□ -0.44
HMGN1-211ENST00000471260 CT45A8P0DMV1 189 aa12.31□□□□□ -0.44
HMGN1-211ENST00000471260 CT45A9P0DMV2 189 aa12.31□□□□□ -0.44
HMGN1-211ENST00000471260 ADSLP30566 484 aaPredicted RBP12.31□□□□□ -0.44
HMGN1-211ENST00000471260 CEACAM8P31997 349 aaPredicted RBP12.31□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms