RNA–Protein interactions for RNA: ENST00000470094.1

BRCA2-202, Transcript of BRCA2, DNA repair associated, humanhuman

TSL 5

Gene BRCA2, Length 842 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA2-202ENST00000470094 WDR36Q8NI36 951 aaKnown RBP2.89□□□□□ -1.95
BRCA2-202ENST00000470094 GTSF1Q8WW33 167 aa2.89□□□□□ -1.95
BRCA2-202ENST00000470094 SLC5A11Q8WWX8 675 aa2.89□□□□□ -1.95
BRCA2-202ENST00000470094 PTPRUQ92729 1446 aa2.89□□□□□ -1.95
BRCA2-202ENST00000470094 PINX1Q96BK5 328 aaKnown RBP2.89□□□□□ -1.95
BRCA2-202ENST00000470094 SLC25A36Q96CQ1 311 aa2.89□□□□□ -1.95
BRCA2-202ENST00000470094 CAPNS2Q96L46 248 aa2.89□□□□□ -1.95
BRCA2-202ENST00000470094 MRPL13Q9BYD1 178 aaKnown RBP2.89□□□□□ -1.95
BRCA2-202ENST00000470094 RNF41Q9H4P4 317 aaPredicted RBP2.89□□□□□ -1.95
BRCA2-202ENST00000470094 WDR76Q9H967 626 aa2.89□□□□□ -1.95
BRCA2-202ENST00000470094 Q9HAA7 133 aa2.89□□□□□ -1.95
BRCA2-202ENST00000470094 FARSBQ9NSD9 589 aaKnown RBP2.89□□□□□ -1.95
BRCA2-202ENST00000470094 STARD5Q9NSY2 213 aa2.89□□□□□ -1.95
BRCA2-202ENST00000470094 EXTL2Q9UBQ6 330 aa2.89□□□□□ -1.95
BRCA2-202ENST00000470094 MLXQ9UH92 298 aa2.89□□□□□ -1.95
BRCA2-202ENST00000470094 B9D1Q9UPM9 204 aa2.89□□□□□ -1.95
BRCA2-202ENST00000470094 ZNF256Q9Y2P7 627 aaPredicted RBP2.89□□□□□ -1.95
BRCA2-202ENST00000470094 RNF115Q9Y4L5 304 aa2.89□□□□□ -1.95
BRCA2-202ENST00000470094 FGD5Q6ZNL6 1462 aa2.89□□□□□ -1.95
BRCA2-202ENST00000470094 GPR89AB7ZAQ6 455 aa2.88□□□□□ -1.95
BRCA2-202ENST00000470094 MPHOSPH10O00566 681 aaKnown RBP2.88□□□□□ -1.95
BRCA2-202ENST00000470094 STK17BO94768 372 aa2.88□□□□□ -1.95
BRCA2-202ENST00000470094 MFN2O95140 757 aa2.88□□□□□ -1.95
BRCA2-202ENST00000470094 PRAMEF12O95522 483 aa2.88□□□□□ -1.95
BRCA2-202ENST00000470094 ASNSP08243 561 aa2.88□□□□□ -1.95
BRCA2-202ENST00000470094 SNRPCP09234 159 aaKnown RBP2.88□□□□□ -1.95
BRCA2-202ENST00000470094 GPR89BP0CG08 455 aa2.88□□□□□ -1.95
BRCA2-202ENST00000470094 DPP4P27487 766 aa2.88□□□□□ -1.95
BRCA2-202ENST00000470094 PSMA5P28066 241 aa2.88□□□□□ -1.95
BRCA2-202ENST00000470094 SGSHP51688 502 aa2.88□□□□□ -1.95
BRCA2-202ENST00000470094 SLC7A2P52569 658 aa2.88□□□□□ -1.95
BRCA2-202ENST00000470094 MFAP2P55001 183 aa2.88□□□□□ -1.95
BRCA2-202ENST00000470094 ZKSCAN8Q15776 578 aaPredicted RBP2.88□□□□□ -1.95
BRCA2-202ENST00000470094 PARP6Q2NL67 630 aa2.88□□□□□ -1.95
BRCA2-202ENST00000470094 SLC36A3Q495N2 470 aa2.88□□□□□ -1.95
BRCA2-202ENST00000470094 ACER2Q5QJU3 275 aa2.88□□□□□ -1.95
BRCA2-202ENST00000470094 RHBDD2Q6NTF9 364 aa2.88□□□□□ -1.95
BRCA2-202ENST00000470094 NIPAL3Q6P499 406 aa2.88□□□□□ -1.95
BRCA2-202ENST00000470094 SLC39A4Q6P5W5 647 aa2.88□□□□□ -1.95
BRCA2-202ENST00000470094 CASC1Q6TDU7 716 aa2.88□□□□□ -1.95
BRCA2-202ENST00000470094 RGS9BPQ6ZS82 235 aa2.88□□□□□ -1.95
BRCA2-202ENST00000470094 TMEM110Q86TL2 294 aa2.88□□□□□ -1.95
BRCA2-202ENST00000470094 RANBP3LQ86VV4 465 aaPredicted RBP2.88□□□□□ -1.95
BRCA2-202ENST00000470094 GPBP1Q86WP2 473 aa2.88□□□□□ -1.95
BRCA2-202ENST00000470094 GRAMD2AQ8IUY3 354 aa2.88□□□□□ -1.95
BRCA2-202ENST00000470094 ARFGAP2Q8N6H7 521 aa2.88□□□□□ -1.95
BRCA2-202ENST00000470094 STKLD1Q8NE28 680 aa2.88□□□□□ -1.95
BRCA2-202ENST00000470094 OR52M1Q8NGK5 317 aa2.88□□□□□ -1.95
BRCA2-202ENST00000470094 OR2T34Q8NGX1 318 aa2.88□□□□□ -1.95
BRCA2-202ENST00000470094 ZNF671Q8TAW3 534 aa2.88□□□□□ -1.95
BRCA2-202ENST00000470094 VN1R17PQ8TDU5 208 aa2.88□□□□□ -1.95
BRCA2-202ENST00000470094 BADQ92934 168 aa2.88□□□□□ -1.95
BRCA2-202ENST00000470094 SIGLEC12Q96PQ1 595 aa2.88□□□□□ -1.95
BRCA2-202ENST00000470094 VPS35Q96QK1 796 aa2.88□□□□□ -1.95
BRCA2-202ENST00000470094 ST6GALNAC5Q9BVH7 336 aa2.88□□□□□ -1.95
BRCA2-202ENST00000470094 YTHDF1Q9BYJ9 559 aaKnown RBP2.88□□□□□ -1.95
BRCA2-202ENST00000470094 POLR1EQ9GZS1 481 aaKnown RBP2.88□□□□□ -1.95
BRCA2-202ENST00000470094 RMND5AQ9H871 391 aa2.88□□□□□ -1.95
BRCA2-202ENST00000470094 COG4Q9H9E3 785 aa2.88□□□□□ -1.95
BRCA2-202ENST00000470094 RDH8Q9NYR8 311 aa2.88□□□□□ -1.95
BRCA2-202ENST00000470094 ATP6V1HQ9UI12 483 aa2.88□□□□□ -1.95
BRCA2-202ENST00000470094 CHMP2BQ9UQN3 213 aa2.88□□□□□ -1.95
BRCA2-202ENST00000470094 RAD54L2Q9Y4B4 1467 aa2.88□□□□□ -1.95
BRCA2-202ENST00000470094 SF3B1O75533 1304 aaKnown RBP eCLIP2.88□□□□□ -1.95
BRCA2-202ENST00000470094 IGHV3OR16-12A0A075B7B8 117 aa2.87□□□□□ -1.95
BRCA2-202ENST00000470094 SYNJ2BP-COX16A0A087WUM0 186 aa2.87□□□□□ -1.95
BRCA2-202ENST00000470094 TRABD2BA6NFA1 517 aa2.87□□□□□ -1.95
BRCA2-202ENST00000470094 FBLL1A6NHQ2 334 aaKnown RBP2.87□□□□□ -1.95
BRCA2-202ENST00000470094 TRIM64CA6NLI5 447 aa2.87□□□□□ -1.95
BRCA2-202ENST00000470094 SAP18O00422 153 aaKnown RBP2.87□□□□□ -1.95
BRCA2-202ENST00000470094 CFLARO15519 480 aa2.87□□□□□ -1.95
BRCA2-202ENST00000470094 GMFGO60234 142 aa2.87□□□□□ -1.95
BRCA2-202ENST00000470094 SPAG6O75602 509 aa2.87□□□□□ -1.95
BRCA2-202ENST00000470094 OR4F21O95013 312 aa2.87□□□□□ -1.95
BRCA2-202ENST00000470094 NUDT14O95848 222 aa2.87□□□□□ -1.95
BRCA2-202ENST00000470094 GOT2P00505 430 aaKnown RBP2.87□□□□□ -1.95
BRCA2-202ENST00000470094 GIG44P09565 113 aaPredicted RBP2.87□□□□□ -1.95
BRCA2-202ENST00000470094 DRD5P21918 477 aa2.87□□□□□ -1.95
BRCA2-202ENST00000470094 HTR2AP28223 471 aa2.87□□□□□ -1.95
BRCA2-202ENST00000470094 TRIM23P36406 574 aa2.87□□□□□ -1.95
BRCA2-202ENST00000470094 PTGFRP43088 359 aa2.87□□□□□ -1.95
BRCA2-202ENST00000470094 ACADVLP49748 655 aa2.87□□□□□ -1.95
BRCA2-202ENST00000470094 ARHGDIAP52565 204 aa2.87□□□□□ -1.95
BRCA2-202ENST00000470094 GBX2P52951 348 aaPredicted RBP2.87□□□□□ -1.95
BRCA2-202ENST00000470094 HERVK_113P63132 956 aa2.87□□□□□ -1.95
BRCA2-202ENST00000470094 ERVK-8P63133 956 aa2.87□□□□□ -1.95
BRCA2-202ENST00000470094 NDPQ00604 133 aa2.87□□□□□ -1.95
BRCA2-202ENST00000470094 SNTB2Q13425 540 aaKnown RBP2.87□□□□□ -1.95
BRCA2-202ENST00000470094 GSG1Q2KHT4 349 aa2.87□□□□□ -1.95
BRCA2-202ENST00000470094 USH1GQ495M9 461 aa2.87□□□□□ -1.95
BRCA2-202ENST00000470094 NADK2Q4G0N4 442 aa2.87□□□□□ -1.95
BRCA2-202ENST00000470094 FAM219BQ5XKK7 198 aa2.87□□□□□ -1.95
BRCA2-202ENST00000470094 CGB2Q6NT52 195 aa2.87□□□□□ -1.95
BRCA2-202ENST00000470094 LRRC8BQ6P9F7 803 aa2.87□□□□□ -1.95
BRCA2-202ENST00000470094 KDELC1Q6UW63 502 aa2.87□□□□□ -1.95
BRCA2-202ENST00000470094 CES3Q6UWW8 571 aa2.87□□□□□ -1.95
BRCA2-202ENST00000470094 APOOLQ6UXV4 268 aa2.87□□□□□ -1.95
BRCA2-202ENST00000470094 MOB2Q70IA6 237 aa2.87□□□□□ -1.95
BRCA2-202ENST00000470094 VPS36Q86VN1 386 aa2.87□□□□□ -1.95
BRCA2-202ENST00000470094 CBWD2Q8IUF1 395 aa2.87□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms