RNA–Protein interactions for RNA: ENST00000469054.1

VPS13D-204, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

TSL 3

Gene VPS13D, Length 567 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-204ENST00000469054 CYP4B1P13584 511 aa10.96□□□□□ -0.65
VPS13D-204ENST00000469054 PTPN6P29350 595 aa10.96□□□□□ -0.65
VPS13D-204ENST00000469054 ADSLP30566 484 aaPredicted RBP10.96□□□□□ -0.65
VPS13D-204ENST00000469054 RFX3P48380 749 aa10.96□□□□□ -0.65
VPS13D-204ENST00000469054 DNASE1L1P49184 302 aa10.96□□□□□ -0.65
VPS13D-204ENST00000469054 POU6F2P78424 691 aaPredicted RBP10.96□□□□□ -0.65
VPS13D-204ENST00000469054 KLF10Q13118 480 aa10.96□□□□□ -0.65
VPS13D-204ENST00000469054 UBAP2LQ14157 1087 aaKnown RBP10.96□□□□□ -0.65
VPS13D-204ENST00000469054 GTDC1Q4AE62 458 aa10.96□□□□□ -0.65
VPS13D-204ENST00000469054 PAGE3Q5JUK9 113 aa10.96□□□□□ -0.65
VPS13D-204ENST00000469054 BICRALQ6AI39 1079 aa10.96□□□□□ -0.65
VPS13D-204ENST00000469054 ZNF324BQ6AW86 544 aaPredicted RBP10.96□□□□□ -0.65
VPS13D-204ENST00000469054 OR5D16Q8NGK9 328 aa10.96□□□□□ -0.65
VPS13D-204ENST00000469054 ZFP90Q8TF47 636 aa10.96□□□□□ -0.65
VPS13D-204ENST00000469054 NR4A3Q92570 626 aa10.96□□□□□ -0.65
VPS13D-204ENST00000469054 CDS1Q92903 461 aa10.96□□□□□ -0.65
VPS13D-204ENST00000469054 ANGPTL4Q9BY76 406 aa10.96□□□□□ -0.65
VPS13D-204ENST00000469054 NMUR2Q9GZQ4 415 aa10.96□□□□□ -0.65
VPS13D-204ENST00000469054 PAIP1Q9H074 479 aaKnown RBP10.96□□□□□ -0.65
VPS13D-204ENST00000469054 SERHL2Q9H4I8 314 aa10.96□□□□□ -0.65
VPS13D-204ENST00000469054 METTL7AQ9H8H3 244 aa10.96□□□□□ -0.65
VPS13D-204ENST00000469054 SLC6A13Q9NSD5 602 aa10.96□□□□□ -0.65
VPS13D-204ENST00000469054 OLAHQ9NV23 265 aa10.96□□□□□ -0.65
VPS13D-204ENST00000469054 NDUFAF1Q9Y375 327 aa10.96□□□□□ -0.65
VPS13D-204ENST00000469054 PCDHB14Q9Y5E9 798 aa10.96□□□□□ -0.65
VPS13D-204ENST00000469054 KCNE3Q9Y6H6 103 aa10.96□□□□□ -0.65
VPS13D-204ENST00000469054 A0A096LPI6 279 aa10.95□□□□□ -0.66
VPS13D-204ENST00000469054 ASNA1O43681 348 aa10.95□□□□□ -0.66
VPS13D-204ENST00000469054 CCDC22O60826 627 aa10.95□□□□□ -0.66
VPS13D-204ENST00000469054 ICOSLGO75144 302 aa10.95□□□□□ -0.66
VPS13D-204ENST00000469054 C1QCP02747 245 aa10.95□□□□□ -0.66
VPS13D-204ENST00000469054 OR12D1P0DN82 309 aa10.95□□□□□ -0.66
VPS13D-204ENST00000469054 PTGDSP41222 190 aa10.95□□□□□ -0.66
VPS13D-204ENST00000469054 CASP9P55211 416 aa10.95□□□□□ -0.66
VPS13D-204ENST00000469054 KCNJ2P63252 427 aa10.95□□□□□ -0.66
VPS13D-204ENST00000469054 TXNL4AP83876 142 aaKnown RBP10.95□□□□□ -0.66
VPS13D-204ENST00000469054 ALDH6A1Q02252 535 aaKnown RBP10.95□□□□□ -0.66
VPS13D-204ENST00000469054 FOXO1Q12778 655 aa10.95□□□□□ -0.66
VPS13D-204ENST00000469054 SNTA1Q13424 505 aa10.95□□□□□ -0.66
VPS13D-204ENST00000469054 CPEB4Q17RY0 729 aaKnown RBP eCLIP10.95□□□□□ -0.66
VPS13D-204ENST00000469054 RNFT1Q5M7Z0 435 aa10.95□□□□□ -0.66
VPS13D-204ENST00000469054 LRIF1Q5T3J3 769 aa10.95□□□□□ -0.66
VPS13D-204ENST00000469054 SLC30A6Q6NXT4 461 aa10.95□□□□□ -0.66
VPS13D-204ENST00000469054 TNFAIP8L2Q6P589 184 aaPredicted RBP10.95□□□□□ -0.66
VPS13D-204ENST00000469054 FIGNL1Q6PIW4 674 aa10.95□□□□□ -0.66
VPS13D-204ENST00000469054 ANGPTL8Q6UXH0 198 aa10.95□□□□□ -0.66
VPS13D-204ENST00000469054 PACS2Q86VP3 889 aa10.95□□□□□ -0.66
VPS13D-204ENST00000469054 RNF130Q86XS8 419 aa10.95□□□□□ -0.66
VPS13D-204ENST00000469054 RNF138Q8WVD3 245 aa10.95□□□□□ -0.66
VPS13D-204ENST00000469054 MIB2Q96AX9 1013 aa10.95□□□□□ -0.66
VPS13D-204ENST00000469054 NTNG2Q96CW9 530 aa10.95□□□□□ -0.66
VPS13D-204ENST00000469054 G6PC3Q9BUM1 346 aa10.95□□□□□ -0.66
VPS13D-204ENST00000469054 TTTY12Q9BZ98 90 aa10.95□□□□□ -0.66
VPS13D-204ENST00000469054 OR51I1Q9H343 314 aa10.95□□□□□ -0.66
VPS13D-204ENST00000469054 TPT1P8Q9HAU6 139 aa10.95□□□□□ -0.66
VPS13D-204ENST00000469054 IL1RL2Q9HB29 575 aa10.95□□□□□ -0.66
VPS13D-204ENST00000469054 TUBA8Q9NY65 449 aaPredicted RBP10.95□□□□□ -0.66
VPS13D-204ENST00000469054 KLRF1Q9NZS2 232 aa10.95□□□□□ -0.66
VPS13D-204ENST00000469054 SLAMF8Q9P0V8 285 aa10.95□□□□□ -0.66
VPS13D-204ENST00000469054 LEF1Q9UJU2 399 aaPredicted RBP10.95□□□□□ -0.66
VPS13D-204ENST00000469054 ADAM21Q9UKJ8 722 aa10.95□□□□□ -0.66
VPS13D-204ENST00000469054 SEC23IPQ9Y6Y8 1000 aaKnown RBP10.95□□□□□ -0.66
VPS13D-204ENST00000469054 CHD6Q8TD26 2715 aa10.95□□□□□ -0.66
VPS13D-204ENST00000469054 BOD1L1Q8NFC6 3051 aa10.94□□□□□ -0.66
VPS13D-204ENST00000469054 PRAMEF25A6NGN4 478 aa10.94□□□□□ -0.66
VPS13D-204ENST00000469054 ANGPT2O15123 496 aa10.94□□□□□ -0.66
VPS13D-204ENST00000469054 SLC22A2O15244 555 aa10.94□□□□□ -0.66
VPS13D-204ENST00000469054 TRIM3O75382 744 aaPredicted RBP10.94□□□□□ -0.66
VPS13D-204ENST00000469054 GLSO94925 669 aaPredicted RBP10.94□□□□□ -0.66
VPS13D-204ENST00000469054 AGR2O95994 175 aa10.94□□□□□ -0.66
VPS13D-204ENST00000469054 AK1P00568 194 aa10.94□□□□□ -0.66
VPS13D-204ENST00000469054 ZNF24P17028 368 aa10.94□□□□□ -0.66
VPS13D-204ENST00000469054 HOXB9P17482 250 aaPredicted RBP10.94□□□□□ -0.66
VPS13D-204ENST00000469054 MST1P26927 711 aa10.94□□□□□ -0.66
VPS13D-204ENST00000469054 LCN1P31025 176 aa10.94□□□□□ -0.66
VPS13D-204ENST00000469054 EVI2BP34910 448 aa10.94□□□□□ -0.66
VPS13D-204ENST00000469054 RFC3P40938 356 aa10.94□□□□□ -0.66
VPS13D-204ENST00000469054 MAGEA8P43361 318 aa10.94□□□□□ -0.66
VPS13D-204ENST00000469054 MASP1P48740 699 aa10.94□□□□□ -0.66
VPS13D-204ENST00000469054 KHKP50053 298 aa10.94□□□□□ -0.66
VPS13D-204ENST00000469054 ANXA11P50995 505 aaKnown RBP10.94□□□□□ -0.66
VPS13D-204ENST00000469054 PPIAP62937 165 aaKnown RBP10.94□□□□□ -0.66
VPS13D-204ENST00000469054 PLGLB1Q02325 96 aa10.94□□□□□ -0.66
VPS13D-204ENST00000469054 MAPRE2Q15555 327 aa10.94□□□□□ -0.66
VPS13D-204ENST00000469054 HYAL4Q2M3T9 481 aa10.94□□□□□ -0.66
VPS13D-204ENST00000469054 DCST2Q5T1A1 773 aa10.94□□□□□ -0.66
VPS13D-204ENST00000469054 CCNJQ5T5M9 372 aa10.94□□□□□ -0.66
VPS13D-204ENST00000469054 ATAD3BQ5T9A4 648 aa10.94□□□□□ -0.66
VPS13D-204ENST00000469054 PIGWQ7Z7B1 504 aa10.94□□□□□ -0.66
VPS13D-204ENST00000469054 ZAR1Q86SH2 424 aa10.94□□□□□ -0.66
VPS13D-204ENST00000469054 GALNT10Q86SR1 603 aa10.94□□□□□ -0.66
VPS13D-204ENST00000469054 MTDHQ86UE4 582 aaKnown RBP10.94□□□□□ -0.66
VPS13D-204ENST00000469054 DPP10Q8N608 796 aa10.94□□□□□ -0.66
VPS13D-204ENST00000469054 CHDHQ8NE62 594 aaPredicted RBP10.94□□□□□ -0.66
VPS13D-204ENST00000469054 OR52N2Q8NGI0 321 aa10.94□□□□□ -0.66
VPS13D-204ENST00000469054 PNPT1Q8TCS8 783 aaKnown RBP10.94□□□□□ -0.66
VPS13D-204ENST00000469054 XAGE5Q8WWM1 108 aa10.94□□□□□ -0.66
VPS13D-204ENST00000469054 RAB8BQ92930 207 aa10.94□□□□□ -0.66
VPS13D-204ENST00000469054 AURKBQ96GD4 344 aaPredicted RBP10.94□□□□□ -0.66
VPS13D-204ENST00000469054 TMEM41AQ96HV5 264 aa10.94□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms