RNA–Protein interactions for RNA: ENST00000468807.1

TTC28-204, Transcript of tetratricopeptide repeat domain 28, humanhuman

TSL 2

Gene TTC28, Length 594 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC28-204ENST00000468807 LHX2P50458 406 aa19.75■□□□□ 0.75
TTC28-204ENST00000468807 GAS1P54826 345 aa19.75■□□□□ 0.75
TTC28-204ENST00000468807 GAB1Q13480 694 aa19.75■□□□□ 0.75
TTC28-204ENST00000468807 PCLAFQ15004 111 aa19.75■□□□□ 0.75
TTC28-204ENST00000468807 CYP27C1Q4G0S4 372 aa19.75■□□□□ 0.75
TTC28-204ENST00000468807 ZNF551Q7Z340 670 aaPredicted RBP19.75■□□□□ 0.75
TTC28-204ENST00000468807 SZRD1Q7Z422 152 aa19.75■□□□□ 0.75
TTC28-204ENST00000468807 LUZP2Q86TE4 346 aa19.75■□□□□ 0.75
TTC28-204ENST00000468807 KIF18BQ86Y91 864 aa19.75■□□□□ 0.75
TTC28-204ENST00000468807 GRAMD2AQ8IUY3 354 aa19.75■□□□□ 0.75
TTC28-204ENST00000468807 UBQLNLQ8IYU4 475 aa19.75■□□□□ 0.75
TTC28-204ENST00000468807 GCNT2Q8N0V5 402 aa19.75■□□□□ 0.75
TTC28-204ENST00000468807 OR2L13Q8N349 312 aa19.75■□□□□ 0.75
TTC28-204ENST00000468807 OR2W6PQ8NHA6 318 aa19.75■□□□□ 0.75
TTC28-204ENST00000468807 FAM222BQ8WU58 562 aa19.75■□□□□ 0.75
TTC28-204ENST00000468807 INTS12Q96CB8 462 aaKnown RBP19.75■□□□□ 0.75
TTC28-204ENST00000468807 TM9SF2Q99805 663 aa19.75■□□□□ 0.75
TTC28-204ENST00000468807 GATA5Q9BWX5 397 aaPredicted RBP19.75■□□□□ 0.75
TTC28-204ENST00000468807 DSN1Q9H410 356 aa19.75■□□□□ 0.75
TTC28-204ENST00000468807 FLRT3Q9NZU0 649 aa19.75■□□□□ 0.75
TTC28-204ENST00000468807 MRTO4Q9UKD2 239 aaKnown RBP19.75■□□□□ 0.75
TTC28-204ENST00000468807 CCL27Q9Y4X3 112 aa19.75■□□□□ 0.75
TTC28-204ENST00000468807 A6NNC1 897 aa19.74■□□□□ 0.75
TTC28-204ENST00000468807 PDPK1O15530 556 aa19.74■□□□□ 0.75
TTC28-204ENST00000468807 AKAP10O43572 662 aa19.74■□□□□ 0.75
TTC28-204ENST00000468807 LINC00032P0C843 101 aa19.74■□□□□ 0.75
TTC28-204ENST00000468807 CLK3P49761 638 aaKnown RBP19.74■□□□□ 0.75
TTC28-204ENST00000468807 DSCR4P56555 118 aaPredicted RBP19.74■□□□□ 0.75
TTC28-204ENST00000468807 SLC18A2Q05940 514 aa19.74■□□□□ 0.75
TTC28-204ENST00000468807 KIAA0040Q15053 153 aa19.74■□□□□ 0.75
TTC28-204ENST00000468807 RAET1LQ5VY80 246 aa19.74■□□□□ 0.75
TTC28-204ENST00000468807 SPNS3Q6ZMD2 512 aa19.74■□□□□ 0.75
TTC28-204ENST00000468807 CHMP1BQ7LBR1 199 aa19.74■□□□□ 0.75
TTC28-204ENST00000468807 P4HA3Q7Z4N8 544 aa19.74■□□□□ 0.75
TTC28-204ENST00000468807 GOT1L1Q8NHS2 421 aaPredicted RBP19.74■□□□□ 0.75
TTC28-204ENST00000468807 CLHC1Q8NHS4 586 aa19.74■□□□□ 0.75
TTC28-204ENST00000468807 RNF138Q8WVD3 245 aa19.74■□□□□ 0.75
TTC28-204ENST00000468807 CIDECQ96AQ7 238 aaPredicted RBP19.74■□□□□ 0.75
TTC28-204ENST00000468807 RMND5BQ96G75 393 aaPredicted RBP19.74■□□□□ 0.75
TTC28-204ENST00000468807 TSSK3Q96PN8 268 aa19.74■□□□□ 0.75
TTC28-204ENST00000468807 SDHAF3Q9NRP4 125 aa19.74■□□□□ 0.75
TTC28-204ENST00000468807 RASSF1Q9NS23 344 aa19.74■□□□□ 0.75
TTC28-204ENST00000468807 MED11Q9P086 117 aa19.74■□□□□ 0.75
TTC28-204ENST00000468807 MED12LQ86YW9 2145 aa19.73■□□□□ 0.75
TTC28-204ENST00000468807 B4DXG7 233 aa19.73■□□□□ 0.75
TTC28-204ENST00000468807 ZIC3O60481 467 aa19.73■□□□□ 0.75
TTC28-204ENST00000468807 TRIM13O60858 407 aa19.73■□□□□ 0.75
TTC28-204ENST00000468807 RCBTB2O95199 551 aa19.73■□□□□ 0.75
TTC28-204ENST00000468807 IL18BPO95998 194 aa19.73■□□□□ 0.75
TTC28-204ENST00000468807 NEFHP12036 1026 aa19.73■□□□□ 0.75
TTC28-204ENST00000468807 CD1EP15812 388 aa19.73■□□□□ 0.75
TTC28-204ENST00000468807 HK1P19367 917 aa19.73■□□□□ 0.75
TTC28-204ENST00000468807 PRPH2P23942 346 aa19.73■□□□□ 0.75
TTC28-204ENST00000468807 CHMP24386 653 aa19.73■□□□□ 0.75
TTC28-204ENST00000468807 GABRA3P34903 492 aa19.73■□□□□ 0.75
TTC28-204ENST00000468807 IST1P53990 364 aa19.73■□□□□ 0.75
TTC28-204ENST00000468807 PRKAG1P54619 331 aa19.73■□□□□ 0.75
TTC28-204ENST00000468807 CLDN18P56856 261 aa19.73■□□□□ 0.75
TTC28-204ENST00000468807 RPL38P63173 70 aaKnown RBP19.73■□□□□ 0.75
TTC28-204ENST00000468807 GALNTL6Q49A17 601 aa19.73■□□□□ 0.75
TTC28-204ENST00000468807 DDIASQ8IXT1 998 aa19.73■□□□□ 0.75
TTC28-204ENST00000468807 OR2T11Q8NH01 316 aa19.73■□□□□ 0.75
TTC28-204ENST00000468807 LINC01560Q8TB33 94 aa19.73■□□□□ 0.75
TTC28-204ENST00000468807 WNT2BQ93097 391 aa19.73■□□□□ 0.75
TTC28-204ENST00000468807 PPCDCQ96CD2 204 aa19.73■□□□□ 0.75
TTC28-204ENST00000468807 APOPT1Q96IL0 206 aa19.73■□□□□ 0.75
TTC28-204ENST00000468807 METTL2AQ96IZ6 378 aaKnown RBP19.73■□□□□ 0.75
TTC28-204ENST00000468807 ZFP3Q96NJ6 502 aa19.73■□□□□ 0.75
TTC28-204ENST00000468807 G6PC3Q9BUM1 346 aa19.73■□□□□ 0.75
TTC28-204ENST00000468807 SFXN3Q9BWM7 321 aa19.73■□□□□ 0.75
TTC28-204ENST00000468807 RBM24Q9BX46 236 aaKnown RBP19.73■□□□□ 0.75
TTC28-204ENST00000468807 LIME1Q9H400 295 aa19.73■□□□□ 0.75
TTC28-204ENST00000468807 SH3BP4Q9P0V3 963 aa19.73■□□□□ 0.75
TTC28-204ENST00000468807 MRPS18CQ9Y3D5 142 aaKnown RBP19.73■□□□□ 0.75
TTC28-204ENST00000468807 ITPR3Q14573 2671 aa19.73■□□□□ 0.75
TTC28-204ENST00000468807 GMFGO60234 142 aa19.72■□□□□ 0.75
TTC28-204ENST00000468807 FADS1O60427 444 aa19.72■□□□□ 0.75
TTC28-204ENST00000468807 PSMG1O95456 288 aa19.72■□□□□ 0.75
TTC28-204ENST00000468807 ZNF708P17019 499 aa19.72■□□□□ 0.75
TTC28-204ENST00000468807 SDC1P18827 310 aa19.72■□□□□ 0.75
TTC28-204ENST00000468807 PSMD4P55036 377 aaKnown RBP19.72■□□□□ 0.75
TTC28-204ENST00000468807 OR2M3Q8NG83 312 aa19.72■□□□□ 0.75
TTC28-204ENST00000468807 OR5M1Q8NGP8 315 aa19.72■□□□□ 0.75
TTC28-204ENST00000468807 ZFP28Q8NHY6 868 aa19.72■□□□□ 0.75
TTC28-204ENST00000468807 GPR151Q8TDV0 419 aa19.72■□□□□ 0.75
TTC28-204ENST00000468807 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP19.72■□□□□ 0.75
TTC28-204ENST00000468807 PIK3R3Q92569 461 aa19.72■□□□□ 0.75
TTC28-204ENST00000468807 LMF2Q9BU23 707 aaKnown RBP19.72■□□□□ 0.75
TTC28-204ENST00000468807 TRMOQ9BU70 441 aa19.72■□□□□ 0.75
TTC28-204ENST00000468807 ACBD3Q9H3P7 528 aa19.72■□□□□ 0.75
TTC28-204ENST00000468807 TUBB1Q9H4B7 451 aa19.72■□□□□ 0.75
TTC28-204ENST00000468807 L2HGDHQ9H9P8 463 aa19.72■□□□□ 0.75
TTC28-204ENST00000468807 C3orf14Q9HBI5 128 aa19.72■□□□□ 0.75
TTC28-204ENST00000468807 CLCF1Q9UBD9 225 aa19.72■□□□□ 0.75
TTC28-204ENST00000468807 BAIAP2L1Q9UHR4 511 aa19.72■□□□□ 0.75
TTC28-204ENST00000468807 ABCG2Q9UNQ0 655 aa19.72■□□□□ 0.75
TTC28-204ENST00000468807 GXYLT2A0PJZ3 443 aa19.71■□□□□ 0.75
TTC28-204ENST00000468807 KCNH1O95259 989 aa19.71■□□□□ 0.75
TTC28-204ENST00000468807 IL33O95760 270 aa19.71■□□□□ 0.75
TTC28-204ENST00000468807 CHRNGP07510 517 aa19.71■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms