RNA–Protein interactions for RNA: ENST00000467533.5

HDAC3-203, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 663 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-203ENST00000467533 CTNNAL1Q9UBT7 734 aa9.07□□□□□ -0.96
HDAC3-203ENST00000467533 ASIC3Q9UHC3 531 aa9.07□□□□□ -0.96
HDAC3-203ENST00000467533 VWA7Q9Y334 891 aa9.07□□□□□ -0.96
HDAC3-203ENST00000467533 PLLPQ9Y342 182 aa9.07□□□□□ -0.96
HDAC3-203ENST00000467533 ASB4Q9Y574 426 aa9.07□□□□□ -0.96
HDAC3-203ENST00000467533 PMF1-BGLAPU3KQ54 211 aa9.07□□□□□ -0.96
HDAC3-203ENST00000467533 PRKDCP78527 4128 aaKnown RBP9.07□□□□□ -0.96
HDAC3-203ENST00000467533 A0A0A6YYD5 115 aa9.06□□□□□ -0.96
HDAC3-203ENST00000467533 LRP5LA4QPB2 252 aa9.06□□□□□ -0.96
HDAC3-203ENST00000467533 PGRMC2O15173 223 aa9.06□□□□□ -0.96
HDAC3-203ENST00000467533 SMAD9O15198 467 aaKnown RBP9.06□□□□□ -0.96
HDAC3-203ENST00000467533 CXCL13O43927 109 aa9.06□□□□□ -0.96
HDAC3-203ENST00000467533 EEDO75530 441 aaKnown RBP9.06□□□□□ -0.96
HDAC3-203ENST00000467533 COL6A2P12110 1019 aa9.06□□□□□ -0.96
HDAC3-203ENST00000467533 CPMP14384 443 aa9.06□□□□□ -0.96
HDAC3-203ENST00000467533 PCMT1P22061 227 aa9.06□□□□□ -0.96
HDAC3-203ENST00000467533 CASP2P42575 452 aa9.06□□□□□ -0.96
HDAC3-203ENST00000467533 GAS1P54826 345 aa9.06□□□□□ -0.96
HDAC3-203ENST00000467533 SPOCK1Q08629 439 aa9.06□□□□□ -0.96
HDAC3-203ENST00000467533 CRYMQ14894 314 aa9.06□□□□□ -0.96
HDAC3-203ENST00000467533 CCNG2Q16589 344 aa9.06□□□□□ -0.96
HDAC3-203ENST00000467533 TMEM201Q5SNT2 666 aa9.06□□□□□ -0.96
HDAC3-203ENST00000467533 LGSNQ5TDP6 509 aa9.06□□□□□ -0.96
HDAC3-203ENST00000467533 MRM1Q6IN84 353 aaKnown RBP9.06□□□□□ -0.96
HDAC3-203ENST00000467533 MFSD12Q6NUT3 480 aa9.06□□□□□ -0.96
HDAC3-203ENST00000467533 CAVIN1Q6NZI2 390 aaKnown RBP9.06□□□□□ -0.96
HDAC3-203ENST00000467533 FAM111BQ6SJ93 734 aa9.06□□□□□ -0.96
HDAC3-203ENST00000467533 B3GLCTQ6Y288 498 aa9.06□□□□□ -0.96
HDAC3-203ENST00000467533 GALNT10Q86SR1 603 aa9.06□□□□□ -0.96
HDAC3-203ENST00000467533 EXOC3L1Q86VI1 746 aa9.06□□□□□ -0.96
HDAC3-203ENST00000467533 NKAPQ8N5F7 415 aaKnown RBP9.06□□□□□ -0.96
HDAC3-203ENST00000467533 LINC01356Q8N9X3 169 aa9.06□□□□□ -0.96
HDAC3-203ENST00000467533 OR4K14Q8NGD5 310 aa9.06□□□□□ -0.96
HDAC3-203ENST00000467533 OR52R1Q8NGF1 315 aa9.06□□□□□ -0.96
HDAC3-203ENST00000467533 MRPL24Q96A35 216 aaKnown RBP9.06□□□□□ -0.96
HDAC3-203ENST00000467533 ESAMQ96AP7 390 aa9.06□□□□□ -0.96
HDAC3-203ENST00000467533 MUCL1Q96DR8 90 aa9.06□□□□□ -0.96
HDAC3-203ENST00000467533 HES6Q96HZ4 224 aa9.06□□□□□ -0.96
HDAC3-203ENST00000467533 FOXN4Q96NZ1 517 aa9.06□□□□□ -0.96
HDAC3-203ENST00000467533 HBEGFQ99075 208 aa9.06□□□□□ -0.96
HDAC3-203ENST00000467533 NAP1L3Q99457 506 aaPredicted RBP9.06□□□□□ -0.96
HDAC3-203ENST00000467533 BPESC1Q9GZL8 116 aa9.06□□□□□ -0.96
HDAC3-203ENST00000467533 LACRTQ9GZZ8 138 aa9.06□□□□□ -0.96
HDAC3-203ENST00000467533 DDX47Q9H0S4 455 aaKnown RBP9.06□□□□□ -0.96
HDAC3-203ENST00000467533 PTGES2Q9H7Z7 377 aa9.06□□□□□ -0.96
HDAC3-203ENST00000467533 PAQR5Q9NXK6 330 aaPredicted RBP9.06□□□□□ -0.96
HDAC3-203ENST00000467533 NPAP1Q9NZP6 1156 aa9.06□□□□□ -0.96
HDAC3-203ENST00000467533 MED11Q9P086 117 aa9.06□□□□□ -0.96
HDAC3-203ENST00000467533 STOML1Q9UBI4 398 aa9.06□□□□□ -0.96
HDAC3-203ENST00000467533 CORO1CQ9ULV4 474 aaPredicted RBP9.06□□□□□ -0.96
HDAC3-203ENST00000467533 PCDHB10Q9UN67 800 aa9.06□□□□□ -0.96
HDAC3-203ENST00000467533 EPN1Q9Y6I3 576 aaPredicted RBP9.06□□□□□ -0.96
HDAC3-203ENST00000467533 LOC390937A0A1W2PQ73 354 aa9.05□□□□□ -0.96
HDAC3-203ENST00000467533 SHISA8B8ZZ34 492 aa9.05□□□□□ -0.96
HDAC3-203ENST00000467533 TO15178 435 aa9.05□□□□□ -0.96
HDAC3-203ENST00000467533 TAPBPO15533 448 aa9.05□□□□□ -0.96
HDAC3-203ENST00000467533 CCNT2O60583 730 aaKnown RBP9.05□□□□□ -0.96
HDAC3-203ENST00000467533 STK16O75716 305 aa9.05□□□□□ -0.96
HDAC3-203ENST00000467533 LYZL6O75951 148 aa9.05□□□□□ -0.96
HDAC3-203ENST00000467533 DHRS4L1P0CG22 281 aa9.05□□□□□ -0.96
HDAC3-203ENST00000467533 PORP16435 677 aaPredicted RBP9.05□□□□□ -0.96
HDAC3-203ENST00000467533 S1PR1P21453 382 aa9.05□□□□□ -0.96
HDAC3-203ENST00000467533 DRD5P21918 477 aa9.05□□□□□ -0.96
HDAC3-203ENST00000467533 APEX1P27695 318 aaKnown RBP9.05□□□□□ -0.96
HDAC3-203ENST00000467533 MAGEA6P43360 314 aa9.05□□□□□ -0.96
HDAC3-203ENST00000467533 PPICP45877 212 aa9.05□□□□□ -0.96
HDAC3-203ENST00000467533 KCNJ1P48048 391 aa9.05□□□□□ -0.96
HDAC3-203ENST00000467533 LIMS1P48059 325 aa9.05□□□□□ -0.96
HDAC3-203ENST00000467533 XKP51811 444 aa9.05□□□□□ -0.96
HDAC3-203ENST00000467533 HILS1P60008 231 aa9.05□□□□□ -0.96
HDAC3-203ENST00000467533 ITGADQ13349 1161 aa9.05□□□□□ -0.96
HDAC3-203ENST00000467533 ZNF460Q14592 562 aa9.05□□□□□ -0.96
HDAC3-203ENST00000467533 TGFBIQ15582 683 aa9.05□□□□□ -0.96
HDAC3-203ENST00000467533 TBCCQ15814 346 aa9.05□□□□□ -0.96
HDAC3-203ENST00000467533 ZNF544Q6NX49 715 aa9.05□□□□□ -0.96
HDAC3-203ENST00000467533 SHQ1Q6PI26 577 aaKnown RBP9.05□□□□□ -0.96
HDAC3-203ENST00000467533 TMEM108Q6UXF1 575 aa9.05□□□□□ -0.96
HDAC3-203ENST00000467533 DEF8Q6ZN54 512 aa9.05□□□□□ -0.96
HDAC3-203ENST00000467533 Q6ZSR9 355 aa9.05□□□□□ -0.96
HDAC3-203ENST00000467533 LARP4Q71RC2 724 aaKnown RBP eCLIP9.05□□□□□ -0.96
HDAC3-203ENST00000467533 LAS2Q8IYD9 372 aa9.05□□□□□ -0.96
HDAC3-203ENST00000467533 AGGF1Q8N302 714 aaeCLIP9.05□□□□□ -0.96
HDAC3-203ENST00000467533 OR7G3Q8NG95 312 aa9.05□□□□□ -0.96
HDAC3-203ENST00000467533 C1GALT1C1Q96EU7 318 aa9.05□□□□□ -0.96
HDAC3-203ENST00000467533 SORCS2Q96PQ0 1159 aa9.05□□□□□ -0.96
HDAC3-203ENST00000467533 LRRC1Q9BTT6 524 aa9.05□□□□□ -0.96
HDAC3-203ENST00000467533 MAT2BQ9NZL9 334 aa9.05□□□□□ -0.96
HDAC3-203ENST00000467533 PRODH2Q9UF12 536 aa9.05□□□□□ -0.96
HDAC3-203ENST00000467533 MGAT4BQ9UQ53 548 aa9.05□□□□□ -0.96
HDAC3-203ENST00000467533 TNFSF11O14788 317 aa9.04□□□□□ -0.96
HDAC3-203ENST00000467533 GMFGO60234 142 aa9.04□□□□□ -0.96
HDAC3-203ENST00000467533 TSPAN2O60636 221 aa9.04□□□□□ -0.96
HDAC3-203ENST00000467533 GBAP04062 536 aa9.04□□□□□ -0.96
HDAC3-203ENST00000467533 PGAM1P18669 254 aa9.04□□□□□ -0.96
HDAC3-203ENST00000467533 EPORP19235 508 aa9.04□□□□□ -0.96
HDAC3-203ENST00000467533 IL2RGP31785 369 aa9.04□□□□□ -0.96
HDAC3-203ENST00000467533 EVI2BP34910 448 aa9.04□□□□□ -0.96
HDAC3-203ENST00000467533 CHN2P52757 468 aa9.04□□□□□ -0.96
HDAC3-203ENST00000467533 PRICKLE4Q2TBC4 344 aa9.04□□□□□ -0.96
HDAC3-203ENST00000467533 GTF2IRD2BQ6EKJ0 949 aa9.04□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 93 ms