RNA–Protein interactions for RNA: ENST00000466862.1

GTF3C3-209, Transcript of general transcription factor IIIC subunit 3, humanhuman

TSL 2

Gene GTF3C3, Length 447 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C3-209ENST00000466862 NCF1P14598 390 aaPredicted RBP1.69□□□□□ -2.14
GTF3C3-209ENST00000466862 EZRP15311 586 aaKnown RBP1.69□□□□□ -2.14
GTF3C3-209ENST00000466862 DNAJB1P25685 340 aa1.69□□□□□ -2.14
GTF3C3-209ENST00000466862 STIP1P31948 543 aaKnown RBP1.69□□□□□ -2.14
GTF3C3-209ENST00000466862 MDH1P40925 334 aaKnown RBP1.69□□□□□ -2.14
GTF3C3-209ENST00000466862 PRPHP41219 470 aa1.69□□□□□ -2.14
GTF3C3-209ENST00000466862 TRPC1P48995 793 aa1.69□□□□□ -2.14
GTF3C3-209ENST00000466862 ARHGDIBP52566 201 aa1.69□□□□□ -2.14
GTF3C3-209ENST00000466862 GEMP55040 296 aa1.69□□□□□ -2.14
GTF3C3-209ENST00000466862 MTTPP55157 894 aa1.69□□□□□ -2.14
GTF3C3-209ENST00000466862 SSTP61278 116 aa1.69□□□□□ -2.14
GTF3C3-209ENST00000466862 CCZ1BP86790 482 aa1.69□□□□□ -2.14
GTF3C3-209ENST00000466862 CCZ1P86791 482 aaPredicted RBP1.69□□□□□ -2.14
GTF3C3-209ENST00000466862 TLE4Q04727 773 aa1.69□□□□□ -2.14
GTF3C3-209ENST00000466862 ZNF33BQ06732 778 aa1.69□□□□□ -2.14
GTF3C3-209ENST00000466862 SCGB2A2Q13296 93 aa1.69□□□□□ -2.14
GTF3C3-209ENST00000466862 DPYSQ14117 519 aa1.69□□□□□ -2.14
GTF3C3-209ENST00000466862 GIT2Q14161 759 aa1.69□□□□□ -2.14
GTF3C3-209ENST00000466862 P2RY14Q15391 338 aa1.69□□□□□ -2.14
GTF3C3-209ENST00000466862 TRADDQ15628 312 aa1.69□□□□□ -2.14
GTF3C3-209ENST00000466862 CEBPEQ15744 281 aa1.69□□□□□ -2.14
GTF3C3-209ENST00000466862 CARTPTQ16568 116 aa1.69□□□□□ -2.14
GTF3C3-209ENST00000466862 STX1AQ16623 288 aa1.69□□□□□ -2.14
GTF3C3-209ENST00000466862 KRTAP21-2Q3LI59 83 aa1.69□□□□□ -2.14
GTF3C3-209ENST00000466862 MS4A13Q5J8X5 152 aa1.69□□□□□ -2.14
GTF3C3-209ENST00000466862 LDLRAP1Q5SW96 308 aa1.69□□□□□ -2.14
GTF3C3-209ENST00000466862 RIPPLY2Q5TAB7 128 aa1.69□□□□□ -2.14
GTF3C3-209ENST00000466862 AGBL2Q5U5Z8 902 aa1.69□□□□□ -2.14
GTF3C3-209ENST00000466862 SNRNP48Q6IEG0 339 aaKnown RBP1.69□□□□□ -2.14
GTF3C3-209ENST00000466862 AFTPHQ6ULP2 937 aa1.69□□□□□ -2.14
GTF3C3-209ENST00000466862 ARSKQ6UWY0 536 aa1.69□□□□□ -2.14
GTF3C3-209ENST00000466862 IL34Q6ZMJ4 242 aa1.69□□□□□ -2.14
GTF3C3-209ENST00000466862 ADAMTSL5Q6ZMM2 481 aa1.69□□□□□ -2.14
GTF3C3-209ENST00000466862 DQX1Q8TE96 717 aaKnown RBP1.69□□□□□ -2.14
GTF3C3-209ENST00000466862 GLYATL1Q969I3 302 aa1.69□□□□□ -2.14
GTF3C3-209ENST00000466862 VPS39Q96JC1 886 aa1.69□□□□□ -2.14
GTF3C3-209ENST00000466862 GUCD1Q96NT3 240 aa1.69□□□□□ -2.14
GTF3C3-209ENST00000466862 AGPAT1Q99943 283 aa1.69□□□□□ -2.14
GTF3C3-209ENST00000466862 THUMPD2Q9BTF0 503 aaKnown RBP1.69□□□□□ -2.14
GTF3C3-209ENST00000466862 NTMT1Q9BV86 223 aa1.69□□□□□ -2.14
GTF3C3-209ENST00000466862 FTHL17Q9BXU8 183 aa1.69□□□□□ -2.14
GTF3C3-209ENST00000466862 SLC25A39Q9BZJ4 359 aaPredicted RBP1.69□□□□□ -2.14
GTF3C3-209ENST00000466862 NMUR2Q9GZQ4 415 aa1.69□□□□□ -2.14
GTF3C3-209ENST00000466862 TRPV6Q9H1D0 765 aa1.69□□□□□ -2.14
GTF3C3-209ENST00000466862 TSPY26PQ9H489 355 aa1.69□□□□□ -2.14
GTF3C3-209ENST00000466862 TMEM231Q9H6L2 316 aa1.69□□□□□ -2.14
GTF3C3-209ENST00000466862 NTN4Q9HB63 628 aa1.69□□□□□ -2.14
GTF3C3-209ENST00000466862 HPS4Q9NQG7 708 aa1.69□□□□□ -2.14
GTF3C3-209ENST00000466862 ZNF331Q9NQX6 463 aaPredicted RBP1.69□□□□□ -2.14
GTF3C3-209ENST00000466862 HOMER3Q9NSC5 361 aa1.69□□□□□ -2.14
GTF3C3-209ENST00000466862 ACOXLQ9NUZ1 547 aa1.69□□□□□ -2.14
GTF3C3-209ENST00000466862 AATFQ9NY61 560 aaKnown RBP eCLIP1.69□□□□□ -2.14
GTF3C3-209ENST00000466862 COPS7AQ9UBW8 275 aa1.69□□□□□ -2.14
GTF3C3-209ENST00000466862 TEKT2Q9UIF3 430 aa1.69□□□□□ -2.14
GTF3C3-209ENST00000466862 PSORS1C1Q9UIG5 152 aa1.69□□□□□ -2.14
GTF3C3-209ENST00000466862 DUSP12Q9UNI6 340 aa1.69□□□□□ -2.14
GTF3C3-209ENST00000466862 ERVK-19Q9WJR5 959 aa1.69□□□□□ -2.14
GTF3C3-209ENST00000466862 ATG4BQ9Y4P1 393 aa1.69□□□□□ -2.14
GTF3C3-209ENST00000466862 U3KQV3 271 aa1.69□□□□□ -2.14
GTF3C3-209ENST00000466862 UBE4BO95155 1302 aa1.68□□□□□ -2.14
GTF3C3-209ENST00000466862 A0A0U1RRA0 63 aa1.68□□□□□ -2.14
GTF3C3-209ENST00000466862 TRABD2BA6NFA1 517 aa1.68□□□□□ -2.14
GTF3C3-209ENST00000466862 TRIM49D1C9J1S8 452 aa1.68□□□□□ -2.14
GTF3C3-209ENST00000466862 F8WDY8 70 aa1.68□□□□□ -2.14
GTF3C3-209ENST00000466862 PDXKO00764 312 aa1.68□□□□□ -2.14
GTF3C3-209ENST00000466862 CLDN3O15551 220 aa1.68□□□□□ -2.14
GTF3C3-209ENST00000466862 SCGB2A1O75556 95 aa1.68□□□□□ -2.14
GTF3C3-209ENST00000466862 WISP3O95389 354 aaPredicted RBP1.68□□□□□ -2.14
GTF3C3-209ENST00000466862 SYNGR4O95473 234 aa1.68□□□□□ -2.14
GTF3C3-209ENST00000466862 NUDT14O95848 222 aa1.68□□□□□ -2.14
GTF3C3-209ENST00000466862 SERPINF2P08697 491 aa1.68□□□□□ -2.14
GTF3C3-209ENST00000466862 TSPY4P0CV99 314 aa1.68□□□□□ -2.14
GTF3C3-209ENST00000466862 TSPY10P0CW01 314 aa1.68□□□□□ -2.14
GTF3C3-209ENST00000466862 TPBGLP0DKB5 382 aa1.68□□□□□ -2.14
GTF3C3-209ENST00000466862 CT45A8P0DMV1 189 aa1.68□□□□□ -2.14
GTF3C3-209ENST00000466862 CT45A9P0DMV2 189 aa1.68□□□□□ -2.14
GTF3C3-209ENST00000466862 PVRP15151 417 aa1.68□□□□□ -2.14
GTF3C3-209ENST00000466862 B4GALT1P15291 398 aa1.68□□□□□ -2.14
GTF3C3-209ENST00000466862 CYP3A5P20815 502 aa1.68□□□□□ -2.14
GTF3C3-209ENST00000466862 HNRNPA2B1P22626 353 aaKnown RBP1.68□□□□□ -2.14
GTF3C3-209ENST00000466862 PRDX6P30041 224 aa1.68□□□□□ -2.14
GTF3C3-209ENST00000466862 ADSSP30520 456 aa1.68□□□□□ -2.14
GTF3C3-209ENST00000466862 MAGEA4P43358 317 aa1.68□□□□□ -2.14
GTF3C3-209ENST00000466862 OR1D4P47884 311 aa1.68□□□□□ -2.14
GTF3C3-209ENST00000466862 NUMBP49757 651 aa1.68□□□□□ -2.14
GTF3C3-209ENST00000466862 HERV-K104P63124 156 aa1.68□□□□□ -2.14
GTF3C3-209ENST00000466862 HSPA14Q0VDF9 509 aa1.68□□□□□ -2.14
GTF3C3-209ENST00000466862 SPP2Q13103 211 aa1.68□□□□□ -2.14
GTF3C3-209ENST00000466862 ANKDD1AQ495B1 522 aa1.68□□□□□ -2.14
GTF3C3-209ENST00000466862 CT45A2Q5DJT8 189 aa1.68□□□□□ -2.14
GTF3C3-209ENST00000466862 XKR4Q5GH76 650 aa1.68□□□□□ -2.14
GTF3C3-209ENST00000466862 DDI2Q5TDH0 399 aa1.68□□□□□ -2.14
GTF3C3-209ENST00000466862 NKAIN2Q5VXU1 208 aa1.68□□□□□ -2.14
GTF3C3-209ENST00000466862 SLC25A24Q6NUK1 477 aa1.68□□□□□ -2.14
GTF3C3-209ENST00000466862 PRSS48Q7RTY5 328 aa1.68□□□□□ -2.14
GTF3C3-209ENST00000466862 PPP1R42Q7Z4L9 355 aa1.68□□□□□ -2.14
GTF3C3-209ENST00000466862 AMZ2Q86W34 360 aa1.68□□□□□ -2.14
GTF3C3-209ENST00000466862 UNC5CLQ8IV45 518 aa1.68□□□□□ -2.14
GTF3C3-209ENST00000466862 TBC1D21Q8IYX1 336 aa1.68□□□□□ -2.14
GTF3C3-209ENST00000466862 RNF148Q8N7C7 305 aa1.68□□□□□ -2.14
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms