RNA–Protein interactions for RNA: ENST00000466222.6

CAPN3-209, Transcript of calpain 3, humanhuman

TSL 2

Gene CAPN3, Length 1,934 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-209ENST00000466222 PADI2Q9Y2J8 665 aa17.37■□□□□ 0.37
CAPN3-209ENST00000466222 TEX51A0A1B0GUA7 166 aa17.36■□□□□ 0.37
CAPN3-209ENST00000466222 KPNA4O00629 521 aaPredicted RBP17.36■□□□□ 0.37
CAPN3-209ENST00000466222 PORP16435 677 aaPredicted RBP17.36■□□□□ 0.37
CAPN3-209ENST00000466222 FBLP22087 321 aaKnown RBP17.36■□□□□ 0.37
CAPN3-209ENST00000466222 UQCRC2P22695 453 aa17.36■□□□□ 0.37
CAPN3-209ENST00000466222 FMO3P31513 532 aa17.36■□□□□ 0.37
CAPN3-209ENST00000466222 CCKBRP32239 447 aa17.36■□□□□ 0.37
CAPN3-209ENST00000466222 CD97P48960 835 aa17.36■□□□□ 0.37
CAPN3-209ENST00000466222 TP53BP2Q13625 1128 aa17.36■□□□□ 0.37
CAPN3-209ENST00000466222 TRMT12Q53H54 448 aaKnown RBP17.36■□□□□ 0.37
CAPN3-209ENST00000466222 FAM111BQ6SJ93 734 aa17.36■□□□□ 0.37
CAPN3-209ENST00000466222 C6orf120Q7Z4R8 191 aa17.36■□□□□ 0.37
CAPN3-209ENST00000466222 P2RY8Q86VZ1 359 aa17.36■□□□□ 0.37
CAPN3-209ENST00000466222 NATD1Q8N6N6 113 aa17.36■□□□□ 0.37
CAPN3-209ENST00000466222 AMER2Q8N7J2 671 aa17.36■□□□□ 0.37
CAPN3-209ENST00000466222 ATG16L2Q8NAA4 619 aa17.36■□□□□ 0.37
CAPN3-209ENST00000466222 OR7G2Q8NG99 324 aa17.36■□□□□ 0.37
CAPN3-209ENST00000466222 OR10Q1Q8NGQ4 319 aa17.36■□□□□ 0.37
CAPN3-209ENST00000466222 PSMA8Q8TAA3 256 aa17.36■□□□□ 0.37
CAPN3-209ENST00000466222 BARD1Q99728 777 aaKnown RBP17.36■□□□□ 0.37
CAPN3-209ENST00000466222 NEUROD4Q9HD90 331 aa17.36■□□□□ 0.37
CAPN3-209ENST00000466222 EXD2Q9NVH0 621 aa17.36■□□□□ 0.37
CAPN3-209ENST00000466222 SH3GLB1Q9Y371 365 aa17.36■□□□□ 0.37
CAPN3-209ENST00000466222 PCDHGB3Q9Y5G1 929 aa17.36■□□□□ 0.37
CAPN3-209ENST00000466222 M0R3G1 203 aa17.35■□□□□ 0.37
CAPN3-209ENST00000466222 SUV39H1O43463 412 aa17.35■□□□□ 0.37
CAPN3-209ENST00000466222 FAM20BO75063 409 aa17.35■□□□□ 0.37
CAPN3-209ENST00000466222 CT62P0C5K7 136 aa17.35■□□□□ 0.37
CAPN3-209ENST00000466222 FGF5P12034 268 aa17.35■□□□□ 0.37
CAPN3-209ENST00000466222 DDX5P17844 614 aaKnown RBP17.35■□□□□ 0.37
CAPN3-209ENST00000466222 IL1RL1Q01638 556 aa17.35■□□□□ 0.37
CAPN3-209ENST00000466222 MC2RQ01718 297 aa17.35■□□□□ 0.37
CAPN3-209ENST00000466222 MFSD4BQ5TF39 518 aa17.35■□□□□ 0.37
CAPN3-209ENST00000466222 CDCP2Q5VXM1 449 aa17.35■□□□□ 0.37
CAPN3-209ENST00000466222 WDR53Q7Z5U6 358 aaPredicted RBP17.35■□□□□ 0.37
CAPN3-209ENST00000466222 IGFN1Q86VF2 1251 aa17.35■□□□□ 0.37
CAPN3-209ENST00000466222 ZNF540Q8NDQ6 660 aa17.35■□□□□ 0.37
CAPN3-209ENST00000466222 SNRNP27Q8WVK2 155 aaKnown RBP17.35■□□□□ 0.37
CAPN3-209ENST00000466222 ELP4Q96EB1 424 aa17.35■□□□□ 0.37
CAPN3-209ENST00000466222 CMKLR1Q99788 373 aa17.35■□□□□ 0.37
CAPN3-209ENST00000466222 MESP1Q9BRJ9 268 aa17.35■□□□□ 0.37
CAPN3-209ENST00000466222 YIPF4Q9BSR8 244 aa17.35■□□□□ 0.37
CAPN3-209ENST00000466222 SERHL2Q9H4I8 314 aa17.35■□□□□ 0.37
CAPN3-209ENST00000466222 PRTFDC1Q9NRG1 225 aa17.35■□□□□ 0.37
CAPN3-209ENST00000466222 ZCCHC3Q9NUD5 404 aaKnown RBP17.35■□□□□ 0.37
CAPN3-209ENST00000466222 LOXL2Q9Y4K0 774 aa17.35■□□□□ 0.37
CAPN3-209ENST00000466222 CORINQ9Y5Q5 1042 aa17.35■□□□□ 0.37
CAPN3-209ENST00000466222 J3QRK9 145 aa17.35■□□□□ 0.37
CAPN3-209ENST00000466222 CTNSO60931 367 aa17.35■□□□□ 0.37
CAPN3-209ENST00000466222 CSO75390 466 aaKnown RBP17.35■□□□□ 0.37
CAPN3-209ENST00000466222 MT-CO3P00414 261 aa17.35■□□□□ 0.37
CAPN3-209ENST00000466222 TFPTP0C1Z6 253 aa17.35■□□□□ 0.37
CAPN3-209ENST00000466222 OPRL1P41146 370 aa17.35■□□□□ 0.37
CAPN3-209ENST00000466222 MLLT10P55197 1068 aa17.35■□□□□ 0.37
CAPN3-209ENST00000466222 E2F1Q01094 437 aa17.35■□□□□ 0.37
CAPN3-209ENST00000466222 TEKQ02763 1124 aa17.35■□□□□ 0.37
CAPN3-209ENST00000466222 NPRL3Q12980 569 aa17.35■□□□□ 0.37
CAPN3-209ENST00000466222 FADDQ13158 208 aa17.35■□□□□ 0.37
CAPN3-209ENST00000466222 ILKQ13418 452 aa17.35■□□□□ 0.37
CAPN3-209ENST00000466222 IL11RAQ14626 422 aa17.35■□□□□ 0.37
CAPN3-209ENST00000466222 MINDY4Q4G0A6 757 aa17.35■□□□□ 0.37
CAPN3-209ENST00000466222 IQCCQ4KMZ1 466 aa17.35■□□□□ 0.37
CAPN3-209ENST00000466222 FAM69BQ5VUD6 431 aa17.35■□□□□ 0.37
CAPN3-209ENST00000466222 SAXO2Q658L1 398 aa17.35■□□□□ 0.37
CAPN3-209ENST00000466222 TNFAIP8L2Q6P589 184 aaPredicted RBP17.35■□□□□ 0.37
CAPN3-209ENST00000466222 FAM199XQ6PEV8 388 aaPredicted RBP17.35■□□□□ 0.37
CAPN3-209ENST00000466222 VTCN1Q7Z7D3 282 aa17.35■□□□□ 0.37
CAPN3-209ENST00000466222 ZNF595Q8IYB9 648 aa17.35■□□□□ 0.37
CAPN3-209ENST00000466222 TMCO5AQ8N6Q1 288 aa17.35■□□□□ 0.37
CAPN3-209ENST00000466222 C11orf65Q8NCR3 313 aa17.35■□□□□ 0.37
CAPN3-209ENST00000466222 C7orf34Q96L11 122 aa17.35■□□□□ 0.37
CAPN3-209ENST00000466222 DOHHQ9BU89 302 aa17.35■□□□□ 0.37
CAPN3-209ENST00000466222 ALOXE3Q9BYJ1 711 aa17.35■□□□□ 0.37
CAPN3-209ENST00000466222 AKIP1Q9NQ31 210 aa17.35■□□□□ 0.37
CAPN3-209ENST00000466222 FBXO8Q9NRD0 319 aa17.35■□□□□ 0.37
CAPN3-209ENST00000466222 GIN1Q9NXP7 522 aa17.35■□□□□ 0.37
CAPN3-209ENST00000466222 SLC39A1Q9NY26 324 aa17.35■□□□□ 0.37
CAPN3-209ENST00000466222 SRPK3Q9UPE1 567 aa17.35■□□□□ 0.37
CAPN3-209ENST00000466222 COL5A1P20908 1838 aaPredicted RBP17.34■□□□□ 0.37
CAPN3-209ENST00000466222 PROB1E7EW31 1015 aa17.34■□□□□ 0.37
CAPN3-209ENST00000466222 HRKO00198 91 aa17.34■□□□□ 0.37
CAPN3-209ENST00000466222 MT-ND2P03891 347 aa17.34■□□□□ 0.37
CAPN3-209ENST00000466222 IMPDH2P12268 514 aa17.34■□□□□ 0.37
CAPN3-209ENST00000466222 CYP4B1P13584 511 aa17.34■□□□□ 0.37
CAPN3-209ENST00000466222 NT5EP21589 574 aa17.34■□□□□ 0.37
CAPN3-209ENST00000466222 RBBP4Q09028 425 aa17.34■□□□□ 0.37
CAPN3-209ENST00000466222 STX4Q12846 297 aa17.34■□□□□ 0.37
CAPN3-209ENST00000466222 NKAIN1Q4KMZ8 207 aa17.34■□□□□ 0.37
CAPN3-209ENST00000466222 HES3Q5TGS1 186 aa17.34■□□□□ 0.37
CAPN3-209ENST00000466222 ZNF385CQ66K41 422 aaPredicted RBP17.34■□□□□ 0.37
CAPN3-209ENST00000466222 GALNT10Q86SR1 603 aa17.34■□□□□ 0.37
CAPN3-209ENST00000466222 PHF10Q8WUB8 498 aaKnown RBP17.34■□□□□ 0.37
CAPN3-209ENST00000466222 TSLPQ969D9 159 aa17.34■□□□□ 0.37
CAPN3-209ENST00000466222 C16orf58Q96GQ5 468 aa17.34■□□□□ 0.37
CAPN3-209ENST00000466222 HRASLS5Q96KN8 279 aa17.34■□□□□ 0.37
CAPN3-209ENST00000466222 ZNF300Q96RE9 604 aaPredicted RBP17.34■□□□□ 0.37
CAPN3-209ENST00000466222 ACOT13Q9NPJ3 140 aa17.34■□□□□ 0.37
CAPN3-209ENST00000466222 EQTNQ9NQ60 294 aa17.34■□□□□ 0.37
CAPN3-209ENST00000466222 B3GALT1Q9Y5Z6 326 aa17.34■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms