RNA–Protein interactions for RNA: ENST00000466100.1

VCP-204, Transcript of valosin containing protein, humanhuman

TSL 2

Gene VCP, Length 508 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCP-204ENST00000466100 FAM156AQ8NDB6 213 aa10.27□□□□□ -0.77
VCP-204ENST00000466100 OR2T12Q8NG77 320 aa10.27□□□□□ -0.77
VCP-204ENST00000466100 RNF138Q8WVD3 245 aa10.27□□□□□ -0.77
VCP-204ENST00000466100 TMBIM1Q969X1 311 aa10.27□□□□□ -0.77
VCP-204ENST00000466100 OMA1Q96E52 524 aa10.27□□□□□ -0.77
VCP-204ENST00000466100 TMEM19Q96HH6 336 aa10.27□□□□□ -0.77
VCP-204ENST00000466100 CLPTM1LQ96KA5 538 aa10.27□□□□□ -0.77
VCP-204ENST00000466100 TRNT1Q96Q11 434 aaKnown RBP10.27□□□□□ -0.77
VCP-204ENST00000466100 ZNF350Q9GZX5 532 aa10.27□□□□□ -0.77
VCP-204ENST00000466100 SAP130Q9H0E3 1048 aa10.27□□□□□ -0.77
VCP-204ENST00000466100 SLC38A1Q9H2H9 487 aa10.27□□□□□ -0.77
VCP-204ENST00000466100 PIF1Q9H611 641 aa10.27□□□□□ -0.77
VCP-204ENST00000466100 ZNF552Q9H707 407 aaPredicted RBP10.27□□□□□ -0.77
VCP-204ENST00000466100 BCL2L10Q9HD36 194 aa10.27□□□□□ -0.77
VCP-204ENST00000466100 EXD2Q9NVH0 621 aa10.27□□□□□ -0.77
VCP-204ENST00000466100 GPR83Q9NYM4 423 aa10.27□□□□□ -0.77
VCP-204ENST00000466100 ADA2Q9NZK5 511 aa10.27□□□□□ -0.77
VCP-204ENST00000466100 LIPT1Q9Y234 373 aa10.27□□□□□ -0.77
VCP-204ENST00000466100 YARS2Q9Y2Z4 477 aaKnown RBP10.27□□□□□ -0.77
VCP-204ENST00000466100 OR10H1Q9Y4A9 318 aa10.27□□□□□ -0.77
VCP-204ENST00000466100 NPFFR2Q9Y5X5 522 aa10.27□□□□□ -0.77
VCP-204ENST00000466100 SEC23IPQ9Y6Y8 1000 aaKnown RBP10.27□□□□□ -0.77
VCP-204ENST00000466100 HEATR5AQ86XA9 2040 aa10.27□□□□□ -0.77
VCP-204ENST00000466100 PCNX3Q9H6A9 2034 aa10.27□□□□□ -0.77
VCP-204ENST00000466100 KMT2BQ9UMN6 2715 aaPredicted RBP10.26□□□□□ -0.77
VCP-204ENST00000466100 OR6C70A6NIJ9 312 aa10.26□□□□□ -0.77
VCP-204ENST00000466100 ADAM10O14672 748 aa10.26□□□□□ -0.77
VCP-204ENST00000466100 KIAA0513O60268 411 aa10.26□□□□□ -0.77
VCP-204ENST00000466100 GCM2O75603 506 aaPredicted RBP10.26□□□□□ -0.77
VCP-204ENST00000466100 PPM1BO75688 479 aa10.26□□□□□ -0.77
VCP-204ENST00000466100 PDE5AO76074 875 aa10.26□□□□□ -0.77
VCP-204ENST00000466100 SORBS2O94875 1100 aaKnown RBP10.26□□□□□ -0.77
VCP-204ENST00000466100 OR6B1O95007 311 aa10.26□□□□□ -0.77
VCP-204ENST00000466100 H6PDO95479 791 aa10.26□□□□□ -0.77
VCP-204ENST00000466100 BCHEP06276 602 aa10.26□□□□□ -0.77
VCP-204ENST00000466100 NAGAP17050 411 aa10.26□□□□□ -0.77
VCP-204ENST00000466100 HTR1EP28566 365 aa10.26□□□□□ -0.77
VCP-204ENST00000466100 SOX3P41225 446 aa10.26□□□□□ -0.77
VCP-204ENST00000466100 SSR4P51571 173 aa10.26□□□□□ -0.77
VCP-204ENST00000466100 CRYBA2P53672 197 aa10.26□□□□□ -0.77
VCP-204ENST00000466100 CDK6Q00534 326 aa10.26□□□□□ -0.77
VCP-204ENST00000466100 FOXK2Q01167 660 aa10.26□□□□□ -0.77
VCP-204ENST00000466100 PLCXD2Q0VAA5 305 aa10.26□□□□□ -0.77
VCP-204ENST00000466100 RAPSNQ13702 412 aa10.26□□□□□ -0.77
VCP-204ENST00000466100 SCARB2Q14108 478 aa10.26□□□□□ -0.77
VCP-204ENST00000466100 NTRK2Q16620 822 aa10.26□□□□□ -0.77
VCP-204ENST00000466100 TBR1Q16650 682 aa10.26□□□□□ -0.77
VCP-204ENST00000466100 DECR1Q16698 335 aa10.26□□□□□ -0.77
VCP-204ENST00000466100 MEP1AQ16819 746 aa10.26□□□□□ -0.77
VCP-204ENST00000466100 ZNF791Q3KP31 576 aaPredicted RBP10.26□□□□□ -0.77
VCP-204ENST00000466100 ATAD3BQ5T9A4 648 aa10.26□□□□□ -0.77
VCP-204ENST00000466100 PRAMEF8Q5VWM4 474 aa10.26□□□□□ -0.77
VCP-204ENST00000466100 PRAMEF7Q5VXH5 474 aa10.26□□□□□ -0.77
VCP-204ENST00000466100 TYW3Q6IPR3 259 aaKnown RBP10.26□□□□□ -0.77
VCP-204ENST00000466100 ERICH5Q6P6B1 374 aa10.26□□□□□ -0.77
VCP-204ENST00000466100 FIGNL1Q6PIW4 674 aa10.26□□□□□ -0.77
VCP-204ENST00000466100 IGFL2Q6UWQ7 119 aa10.26□□□□□ -0.77
VCP-204ENST00000466100 LRRC74BQ6ZQY2 392 aa10.26□□□□□ -0.77
VCP-204ENST00000466100 C16orf62Q7Z3J2 963 aa10.26□□□□□ -0.77
VCP-204ENST00000466100 GALNT10Q86SR1 603 aa10.26□□□□□ -0.77
VCP-204ENST00000466100 ZNF227Q86WZ6 799 aa10.26□□□□□ -0.77
VCP-204ENST00000466100 PTRH1Q86Y79 214 aaKnown RBP10.26□□□□□ -0.77
VCP-204ENST00000466100 TAGAPQ8N103 731 aa10.26□□□□□ -0.77
VCP-204ENST00000466100 BEST3Q8N1M1 668 aa10.26□□□□□ -0.77
VCP-204ENST00000466100 METTL25Q8N6Q8 603 aa10.26□□□□□ -0.77
VCP-204ENST00000466100 C11orf65Q8NCR3 313 aa10.26□□□□□ -0.77
VCP-204ENST00000466100 FDCSPQ8NFU4 85 aa10.26□□□□□ -0.77
VCP-204ENST00000466100 NFKBIDQ8NI38 313 aa10.26□□□□□ -0.77
VCP-204ENST00000466100 SLC22A8Q8TCC7 542 aa10.26□□□□□ -0.77
VCP-204ENST00000466100 APOBEC4Q8WW27 367 aaKnown RBP10.26□□□□□ -0.77
VCP-204ENST00000466100 DIO2Q92813 273 aa10.26□□□□□ -0.77
VCP-204ENST00000466100 HGDQ93099 445 aa10.26□□□□□ -0.77
VCP-204ENST00000466100 UTP4Q969X6 686 aaKnown RBP10.26□□□□□ -0.77
VCP-204ENST00000466100 ZNF354BQ96LW1 612 aa10.26□□□□□ -0.77
VCP-204ENST00000466100 KCTD14Q9BQ13 255 aaPredicted RBP10.26□□□□□ -0.77
VCP-204ENST00000466100 TREX2Q9BQ50 279 aaPredicted RBP10.26□□□□□ -0.77
VCP-204ENST00000466100 THTPAQ9BU02 230 aa10.26□□□□□ -0.77
VCP-204ENST00000466100 TRIM45Q9H8W5 580 aaPredicted RBP10.26□□□□□ -0.77
VCP-204ENST00000466100 SH2D2AQ9NP31 389 aa10.26□□□□□ -0.77
VCP-204ENST00000466100 ZNF451Q9Y4E5 1061 aa10.26□□□□□ -0.77
VCP-204ENST00000466100 PCDHGB3Q9Y5G1 929 aa10.26□□□□□ -0.77
VCP-204ENST00000466100 PCDHGA10Q9Y5H3 936 aa10.26□□□□□ -0.77
VCP-204ENST00000466100 CFAP46Q8IYW2 2715 aa10.25□□□□□ -0.77
VCP-204ENST00000466100 ZFYVE26Q68DK2 2539 aa10.25□□□□□ -0.77
VCP-204ENST00000466100 CENPVL1A0A0U1RR11 272 aa10.25□□□□□ -0.77
VCP-204ENST00000466100 ELOVL7A1L3X0 281 aa10.25□□□□□ -0.77
VCP-204ENST00000466100 A6NL46 340 aa10.25□□□□□ -0.77
VCP-204ENST00000466100 CDK2AP1O14519 115 aa10.25□□□□□ -0.77
VCP-204ENST00000466100 SLC28A2O43868 658 aa10.25□□□□□ -0.77
VCP-204ENST00000466100 FCMRO60667 390 aa10.25□□□□□ -0.77
VCP-204ENST00000466100 UGT2B11O75310 529 aa10.25□□□□□ -0.77
VCP-204ENST00000466100 STX11O75558 287 aa10.25□□□□□ -0.77
VCP-204ENST00000466100 PGM3O95394 542 aa10.25□□□□□ -0.77
VCP-204ENST00000466100 ALPPP05187 535 aa10.25□□□□□ -0.77
VCP-204ENST00000466100 NR2F1P10589 423 aa10.25□□□□□ -0.77
VCP-204ENST00000466100 CYP4B1P13584 511 aa10.25□□□□□ -0.77
VCP-204ENST00000466100 RPS4Y1P22090 263 aaKnown RBP10.25□□□□□ -0.77
VCP-204ENST00000466100 LCN1P31025 176 aa10.25□□□□□ -0.77
VCP-204ENST00000466100 PGM1P36871 562 aa10.25□□□□□ -0.77
VCP-204ENST00000466100 ST13P50502 369 aaKnown RBP10.25□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms