RNA–Protein interactions for RNA: ENST00000466032.1

CHMP3-206, Transcript of charged multivesicular body protein 3, humanhuman

TSL 2

Gene CHMP3, Length 436 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-206ENST00000466032 OR51I1Q9H343 314 aa5.59□□□□□ -1.51
CHMP3-206ENST00000466032 PALMDQ9NP74 551 aa5.59□□□□□ -1.51
CHMP3-206ENST00000466032 NECTIN3Q9NQS3 549 aa5.59□□□□□ -1.51
CHMP3-206ENST00000466032 PNO1Q9NRX1 252 aaKnown RBP5.59□□□□□ -1.51
CHMP3-206ENST00000466032 SLC22A11Q9NSA0 550 aa5.59□□□□□ -1.51
CHMP3-206ENST00000466032 DCAF13Q9NV06 445 aaKnown RBP5.59□□□□□ -1.51
CHMP3-206ENST00000466032 ARMC1Q9NVT9 282 aa5.59□□□□□ -1.51
CHMP3-206ENST00000466032 GPATCH2Q9NW75 528 aa5.59□□□□□ -1.51
CHMP3-206ENST00000466032 KLHL28Q9NXS3 571 aa5.59□□□□□ -1.51
CHMP3-206ENST00000466032 CTSFQ9UBX1 484 aa5.59□□□□□ -1.51
CHMP3-206ENST00000466032 TCFL5Q9UL49 500 aa5.59□□□□□ -1.51
CHMP3-206ENST00000466032 CLDN16Q9Y5I7 305 aa5.59□□□□□ -1.51
CHMP3-206ENST00000466032 HEMK1Q9Y5R4 338 aaPredicted RBP5.59□□□□□ -1.51
CHMP3-206ENST00000466032 RIF1Q5UIP0 2472 aaKnown RBP5.59□□□□□ -1.51
CHMP3-206ENST00000466032 LAMA1P25391 3075 aa5.59□□□□□ -1.51
CHMP3-206ENST00000466032 FAM186AA6NE01 2351 aa5.59□□□□□ -1.51
CHMP3-206ENST00000466032 DMDP11532 3685 aa5.59□□□□□ -1.52
CHMP3-206ENST00000466032 WDFY4Q6ZS81 3184 aa5.58□□□□□ -1.52
CHMP3-206ENST00000466032 MYO15AQ9UKN7 3530 aa5.58□□□□□ -1.52
CHMP3-206ENST00000466032 GIMAP1-GIMAP5A0A087WTJ2 511 aa5.58□□□□□ -1.52
CHMP3-206ENST00000466032 C2orf92A0A1B0GVN3 265 aa5.58□□□□□ -1.52
CHMP3-206ENST00000466032 TCRBV3S1A0A5B6 114 aa5.58□□□□□ -1.52
CHMP3-206ENST00000466032 DHRS12A0PJE2 317 aa5.58□□□□□ -1.52
CHMP3-206ENST00000466032 FRG2CA6NGY1 282 aa5.58□□□□□ -1.52
CHMP3-206ENST00000466032 C9orf172C9J069 976 aa5.58□□□□□ -1.52
CHMP3-206ENST00000466032 SYT5O00445 386 aa5.58□□□□□ -1.52
CHMP3-206ENST00000466032 HMGN4O00479 90 aa5.58□□□□□ -1.52
CHMP3-206ENST00000466032 ARPC2O15144 300 aa5.58□□□□□ -1.52
CHMP3-206ENST00000466032 TO15178 435 aa5.58□□□□□ -1.52
CHMP3-206ENST00000466032 TPD52L2O43399 206 aaKnown RBP5.58□□□□□ -1.52
CHMP3-206ENST00000466032 SUV39H1O43463 412 aa5.58□□□□□ -1.52
CHMP3-206ENST00000466032 IDH3BO43837 385 aa5.58□□□□□ -1.52
CHMP3-206ENST00000466032 HS6ST1O60243 411 aa5.58□□□□□ -1.52
CHMP3-206ENST00000466032 RAD1O60671 282 aa5.58□□□□□ -1.52
CHMP3-206ENST00000466032 DPM1O60762 260 aa5.58□□□□□ -1.52
CHMP3-206ENST00000466032 PFDN1O60925 122 aa5.58□□□□□ -1.52
CHMP3-206ENST00000466032 PRKRAO75569 313 aaKnown RBP5.58□□□□□ -1.52
CHMP3-206ENST00000466032 MTRF1O75570 445 aaKnown RBP5.58□□□□□ -1.52
CHMP3-206ENST00000466032 CDC123O75794 336 aaPredicted RBP5.58□□□□□ -1.52
CHMP3-206ENST00000466032 PDE5AO76074 875 aa5.58□□□□□ -1.52
CHMP3-206ENST00000466032 ZFAND5O76080 213 aa5.58□□□□□ -1.52
CHMP3-206ENST00000466032 PGM3O95394 542 aa5.58□□□□□ -1.52
CHMP3-206ENST00000466032 CBX7O95931 251 aa5.58□□□□□ -1.52
CHMP3-206ENST00000466032 HPP00738 406 aa5.58□□□□□ -1.52
CHMP3-206ENST00000466032 IGKV3-11P04433 115 aa5.58□□□□□ -1.52
CHMP3-206ENST00000466032 THBS1P07996 1170 aa5.58□□□□□ -1.52
CHMP3-206ENST00000466032 RAP2AP10114 183 aa5.58□□□□□ -1.52
CHMP3-206ENST00000466032 ETFAP13804 333 aa5.58□□□□□ -1.52
CHMP3-206ENST00000466032 NAT1P18440 290 aa5.58□□□□□ -1.52
CHMP3-206ENST00000466032 TCN1P20061 433 aaPredicted RBP5.58□□□□□ -1.52
CHMP3-206ENST00000466032 S1PR1P21453 382 aa5.58□□□□□ -1.52
CHMP3-206ENST00000466032 SLC7A1P30825 629 aa5.58□□□□□ -1.52
CHMP3-206ENST00000466032 KRT20P35900 424 aa5.58□□□□□ -1.52
CHMP3-206ENST00000466032 PIGAP37287 484 aa5.58□□□□□ -1.52
CHMP3-206ENST00000466032 MAN2A2P49641 1150 aa5.58□□□□□ -1.52
CHMP3-206ENST00000466032 CLK3P49761 638 aaKnown RBP5.58□□□□□ -1.52
CHMP3-206ENST00000466032 EMDP50402 254 aa5.58□□□□□ -1.52
CHMP3-206ENST00000466032 ARHGDIAP52565 204 aa5.58□□□□□ -1.52
CHMP3-206ENST00000466032 RRADP55042 308 aa5.58□□□□□ -1.52
CHMP3-206ENST00000466032 SLC37A1P57057 533 aa5.58□□□□□ -1.52
CHMP3-206ENST00000466032 PCBP3P57721 371 aaKnown RBP5.58□□□□□ -1.52
CHMP3-206ENST00000466032 SELENOWP63302 87 aa5.58□□□□□ -1.52
CHMP3-206ENST00000466032 ZNF155Q12901 538 aaPredicted RBP5.58□□□□□ -1.52
CHMP3-206ENST00000466032 DNASE1L3Q13609 305 aa5.58□□□□□ -1.52
CHMP3-206ENST00000466032 ERV3-1Q14264 604 aa5.58□□□□□ -1.52
CHMP3-206ENST00000466032 LARS2Q15031 903 aaKnown RBP5.58□□□□□ -1.52
CHMP3-206ENST00000466032 CPEB4Q17RY0 729 aaKnown RBP eCLIP5.58□□□□□ -1.52
CHMP3-206ENST00000466032 PRSS53Q2L4Q9 553 aa5.58□□□□□ -1.52
CHMP3-206ENST00000466032 GTDC1Q4AE62 458 aa5.58□□□□□ -1.52
CHMP3-206ENST00000466032 LIN52Q52LA3 116 aa5.58□□□□□ -1.52
CHMP3-206ENST00000466032 TRMT12Q53H54 448 aaKnown RBP5.58□□□□□ -1.52
CHMP3-206ENST00000466032 EIPR1Q53HC9 387 aa5.58□□□□□ -1.52
CHMP3-206ENST00000466032 SFT2D3Q587I9 215 aa5.58□□□□□ -1.52
CHMP3-206ENST00000466032 EXOSC6Q5RKV6 272 aaKnown RBP5.58□□□□□ -1.52
CHMP3-206ENST00000466032 PRAMEF17Q5VTA0 474 aa5.58□□□□□ -1.52
CHMP3-206ENST00000466032 PLAG1Q6DJT9 500 aa5.58□□□□□ -1.52
CHMP3-206ENST00000466032 JMJD6Q6NYC1 403 aaPredicted RBP5.58□□□□□ -1.52
CHMP3-206ENST00000466032 TMEM154Q6P9G4 183 aa5.58□□□□□ -1.52
CHMP3-206ENST00000466032 PAPD4Q6PIY7 484 aaKnown RBP5.58□□□□□ -1.52
CHMP3-206ENST00000466032 DHRS4L2Q6PKH6 230 aa5.58□□□□□ -1.52
CHMP3-206ENST00000466032 FAM198BQ6UWH4 519 aa5.58□□□□□ -1.52
CHMP3-206ENST00000466032 CBLL1Q75N03 491 aa5.58□□□□□ -1.52
CHMP3-206ENST00000466032 SPATA24Q86W54 205 aa5.58□□□□□ -1.52
CHMP3-206ENST00000466032 DTX1Q86Y01 620 aa5.58□□□□□ -1.52
CHMP3-206ENST00000466032 PTOV1Q86YD1 416 aa5.58□□□□□ -1.52
CHMP3-206ENST00000466032 MISPQ8IVT2 679 aa5.58□□□□□ -1.52
CHMP3-206ENST00000466032 ZZZ3Q8IYH5 903 aa5.58□□□□□ -1.52
CHMP3-206ENST00000466032 MMP21Q8N119 569 aa5.58□□□□□ -1.52
CHMP3-206ENST00000466032 METTL27Q8N6F8 245 aaPredicted RBP5.58□□□□□ -1.52
CHMP3-206ENST00000466032 IL22RA1Q8N6P7 574 aa5.58□□□□□ -1.52
CHMP3-206ENST00000466032 HORMAD2Q8N7B1 307 aa5.58□□□□□ -1.52
CHMP3-206ENST00000466032 ZNF615Q8N8J6 731 aa5.58□□□□□ -1.52
CHMP3-206ENST00000466032 PAPD5Q8NDF8 572 aaKnown RBP5.58□□□□□ -1.52
CHMP3-206ENST00000466032 CATSPER1Q8NEC5 780 aa5.58□□□□□ -1.52
CHMP3-206ENST00000466032 OR52R1Q8NGF1 315 aa5.58□□□□□ -1.52
CHMP3-206ENST00000466032 OR5AK3PQ8NH89 298 aa5.58□□□□□ -1.52
CHMP3-206ENST00000466032 SLC2A12Q8TD20 617 aa5.58□□□□□ -1.52
CHMP3-206ENST00000466032 GPR151Q8TDV0 419 aa5.58□□□□□ -1.52
CHMP3-206ENST00000466032 SLC38A5Q8WUX1 472 aa5.58□□□□□ -1.52
CHMP3-206ENST00000466032 THAP4Q8WY91 577 aa5.58□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms