RNA–Protein interactions for RNA: ENST00000464187.1

COL5A1-205, Transcript of collagen type V alpha 1 chain, humanhuman

TSL 2

Gene COL5A1, Length 1,830 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1-205ENST00000464187 PRKAG1P54619 331 aa13.55□□□□□ -0.24
COL5A1-205ENST00000464187 SIM1P81133 766 aaPredicted RBP13.55□□□□□ -0.24
COL5A1-205ENST00000464187 SHC2P98077 582 aa13.55□□□□□ -0.24
COL5A1-205ENST00000464187 DGCR6Q14129 220 aa13.55□□□□□ -0.24
COL5A1-205ENST00000464187 PTGES3Q15185 160 aaKnown RBP13.55□□□□□ -0.24
COL5A1-205ENST00000464187 FAM214AQ32MH5 1076 aa13.55□□□□□ -0.24
COL5A1-205ENST00000464187 UBE2UQ5VVX9 321 aa13.55□□□□□ -0.24
COL5A1-205ENST00000464187 TMEM236Q5W0B7 351 aa13.55□□□□□ -0.24
COL5A1-205ENST00000464187 NIPAL1Q6NVV3 410 aa13.55□□□□□ -0.24
COL5A1-205ENST00000464187 GPR135Q8IZ08 494 aa13.55□□□□□ -0.24
COL5A1-205ENST00000464187 PRSS33Q8NF86 280 aa13.55□□□□□ -0.24
COL5A1-205ENST00000464187 BBS10Q8TAM1 723 aa13.55□□□□□ -0.24
COL5A1-205ENST00000464187 GGHQ92820 318 aa13.55□□□□□ -0.24
COL5A1-205ENST00000464187 ZNF501Q96CX3 271 aaPredicted RBP13.55□□□□□ -0.24
COL5A1-205ENST00000464187 CCDC74BQ96LY2 380 aa13.55□□□□□ -0.24
COL5A1-205ENST00000464187 FUZQ9BT04 418 aa13.55□□□□□ -0.24
COL5A1-205ENST00000464187 LRFN3Q9BTN0 628 aa13.55□□□□□ -0.24
COL5A1-205ENST00000464187 EDEM2Q9BV94 578 aa13.55□□□□□ -0.24
COL5A1-205ENST00000464187 CUTCQ9NTM9 273 aa13.55□□□□□ -0.24
COL5A1-205ENST00000464187 SELENONQ9NZV5 590 aa13.55□□□□□ -0.24
COL5A1-205ENST00000464187 SERTAD3Q9UJW9 196 aa13.55□□□□□ -0.24
COL5A1-205ENST00000464187 ZNF780BQ9Y6R6 833 aa13.55□□□□□ -0.24
COL5A1-205ENST00000464187 DSPPQ9NZW4 1301 aa13.55□□□□□ -0.24
COL5A1-205ENST00000464187 SPTBP11277 2137 aa13.55□□□□□ -0.24
COL5A1-205ENST00000464187 M0R3H8 397 aa13.55□□□□□ -0.24
COL5A1-205ENST00000464187 AGRPO00253 132 aa13.55□□□□□ -0.24
COL5A1-205ENST00000464187 NTN3O00634 580 aaPredicted RBP13.55□□□□□ -0.24
COL5A1-205ENST00000464187 SERPINB7O75635 380 aa13.55□□□□□ -0.24
COL5A1-205ENST00000464187 CLPXO76031 633 aa13.55□□□□□ -0.24
COL5A1-205ENST00000464187 EPPINO95925 133 aa13.55□□□□□ -0.24
COL5A1-205ENST00000464187 ADAP00813 363 aa13.55□□□□□ -0.24
COL5A1-205ENST00000464187 HMGN2P05204 90 aaKnown RBP13.55□□□□□ -0.24
COL5A1-205ENST00000464187 CDK1P06493 297 aa13.55□□□□□ -0.24
COL5A1-205ENST00000464187 H1F0P07305 194 aaKnown RBP13.55□□□□□ -0.24
COL5A1-205ENST00000464187 GP1BAP07359 652 aa13.55□□□□□ -0.24
COL5A1-205ENST00000464187 FHP07954 510 aa13.55□□□□□ -0.24
COL5A1-205ENST00000464187 CD59P13987 128 aa13.55□□□□□ -0.24
COL5A1-205ENST00000464187 CSNK2A2P19784 350 aaPredicted RBP13.55□□□□□ -0.24
COL5A1-205ENST00000464187 CHMP24386 653 aa13.55□□□□□ -0.24
COL5A1-205ENST00000464187 TGFBR2P37173 567 aa13.55□□□□□ -0.24
COL5A1-205ENST00000464187 MAGEA8P43361 318 aa13.55□□□□□ -0.24
COL5A1-205ENST00000464187 ST13P50502 369 aaKnown RBP13.55□□□□□ -0.24
COL5A1-205ENST00000464187 CRISP1P54107 249 aa13.55□□□□□ -0.24
COL5A1-205ENST00000464187 CRISP3P54108 245 aa13.55□□□□□ -0.24
COL5A1-205ENST00000464187 CEBPEQ15744 281 aa13.55□□□□□ -0.24
COL5A1-205ENST00000464187 MOGQ16653 247 aa13.55□□□□□ -0.24
COL5A1-205ENST00000464187 CLPPQ16740 277 aaPredicted RBP13.55□□□□□ -0.24
COL5A1-205ENST00000464187 PRAMEF17Q5VTA0 474 aa13.55□□□□□ -0.24
COL5A1-205ENST00000464187 P2RY8Q86VZ1 359 aa13.55□□□□□ -0.24
COL5A1-205ENST00000464187 KRT73Q86Y46 540 aa13.55□□□□□ -0.24
COL5A1-205ENST00000464187 CROCCP3Q8IVE0 287 aa13.55□□□□□ -0.24
COL5A1-205ENST00000464187 OR56A1Q8NGH5 318 aa13.55□□□□□ -0.24
COL5A1-205ENST00000464187 MOAP1Q96BY2 351 aa13.55□□□□□ -0.24
COL5A1-205ENST00000464187 MMABQ96EY8 250 aaPredicted RBP13.55□□□□□ -0.24
COL5A1-205ENST00000464187 ZNF681Q96N22 645 aa13.55□□□□□ -0.24
COL5A1-205ENST00000464187 BCL2L10Q9HD36 194 aa13.55□□□□□ -0.24
COL5A1-205ENST00000464187 AMBNQ9NP70 447 aa13.55□□□□□ -0.24
COL5A1-205ENST00000464187 PRDM9Q9NQV7 894 aa13.55□□□□□ -0.24
COL5A1-205ENST00000464187 SEMA4GQ9NTN9 838 aa13.55□□□□□ -0.24
COL5A1-205ENST00000464187 GIMAP4Q9NUV9 329 aa13.55□□□□□ -0.24
COL5A1-205ENST00000464187 IMPAD1Q9NX62 359 aa13.55□□□□□ -0.24
COL5A1-205ENST00000464187 TMCC3Q9ULS5 477 aa13.55□□□□□ -0.24
COL5A1-205ENST00000464187 CLCA1A8K7I4 914 aa13.54□□□□□ -0.24
COL5A1-205ENST00000464187 D6RAR5 112 aa13.54□□□□□ -0.24
COL5A1-205ENST00000464187 FAAHO00519 579 aa13.54□□□□□ -0.24
COL5A1-205ENST00000464187 CHST10O43529 356 aa13.54□□□□□ -0.24
COL5A1-205ENST00000464187 OXSR1O95747 527 aaPredicted RBP13.54□□□□□ -0.24
COL5A1-205ENST00000464187 C21orf33P30042 268 aaPredicted RBP13.54□□□□□ -0.24
COL5A1-205ENST00000464187 MPIP34949 423 aa13.54□□□□□ -0.24
COL5A1-205ENST00000464187 MC3RP41968 323 aa13.54□□□□□ -0.24
COL5A1-205ENST00000464187 AVPR1BP47901 424 aa13.54□□□□□ -0.24
COL5A1-205ENST00000464187 RAB38P57729 211 aa13.54□□□□□ -0.24
COL5A1-205ENST00000464187 MAT1AQ00266 395 aaKnown RBP13.54□□□□□ -0.24
COL5A1-205ENST00000464187 TBCEQ15813 527 aaPredicted RBP13.54□□□□□ -0.24
COL5A1-205ENST00000464187 DCST1Q5T197 706 aa13.54□□□□□ -0.24
COL5A1-205ENST00000464187 BHLHB9Q6PI77 547 aa13.54□□□□□ -0.24
COL5A1-205ENST00000464187 TTLL10Q6ZVT0 673 aa13.54□□□□□ -0.24
COL5A1-205ENST00000464187 HMGN2P46Q86SG4 172 aa13.54□□□□□ -0.24
COL5A1-205ENST00000464187 SLITRK4Q8IW52 837 aa13.54□□□□□ -0.24
COL5A1-205ENST00000464187 METTL27Q8N6F8 245 aaPredicted RBP13.54□□□□□ -0.24
COL5A1-205ENST00000464187 TMEM52Q8NDY8 209 aa13.54□□□□□ -0.24
COL5A1-205ENST00000464187 OR9A2Q8NGT5 310 aa13.54□□□□□ -0.24
COL5A1-205ENST00000464187 MIPOL1Q8TD10 442 aa13.54□□□□□ -0.24
COL5A1-205ENST00000464187 MYDGFQ969H8 173 aa13.54□□□□□ -0.24
COL5A1-205ENST00000464187 C16orf58Q96GQ5 468 aa13.54□□□□□ -0.24
COL5A1-205ENST00000464187 PRRX2Q99811 253 aa13.54□□□□□ -0.24
COL5A1-205ENST00000464187 TMEM9BQ9NQ34 198 aa13.54□□□□□ -0.24
COL5A1-205ENST00000464187 HCN3Q9P1Z3 774 aa13.54□□□□□ -0.24
COL5A1-205ENST00000464187 REV1Q9UBZ9 1251 aa13.54□□□□□ -0.24
COL5A1-205ENST00000464187 A4GNTQ9UNA3 340 aa13.54□□□□□ -0.24
COL5A1-205ENST00000464187 TMEM184BQ9Y519 407 aaPredicted RBP13.54□□□□□ -0.24
COL5A1-205ENST00000464187 KCNE3Q9Y6H6 103 aa13.54□□□□□ -0.24
COL5A1-205ENST00000464187 SLC22A1O15245 554 aa13.53□□□□□ -0.24
COL5A1-205ENST00000464187 EMC8O43402 210 aa13.53□□□□□ -0.24
COL5A1-205ENST00000464187 ALAS2P22557 587 aa13.53□□□□□ -0.24
COL5A1-205ENST00000464187 ANXA11P50995 505 aaKnown RBP13.53□□□□□ -0.24
COL5A1-205ENST00000464187 CDC42P60953 191 aa13.53□□□□□ -0.24
COL5A1-205ENST00000464187 ACY1Q03154 408 aa13.53□□□□□ -0.24
COL5A1-205ENST00000464187 LTB4RQ15722 352 aa13.53□□□□□ -0.24
COL5A1-205ENST00000464187 PHF19Q5T6S3 580 aa13.53□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms