RNA–Protein interactions for RNA: ENST00000464078.5

HMGN1-210, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 5

Gene HMGN1, Length 508 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-210ENST00000464078 MCM8Q9UJA3 840 aa15.56■□□□□ 0.08
HMGN1-210ENST00000464078 C17orf51A8MQB3 221 aa15.55■□□□□ 0.08
HMGN1-210ENST00000464078 SMIM24O75264 130 aa15.55■□□□□ 0.08
HMGN1-210ENST00000464078 TBXA2RP21731 343 aa15.55■□□□□ 0.08
HMGN1-210ENST00000464078 SUCLG1P53597 346 aaKnown RBP15.55■□□□□ 0.08
HMGN1-210ENST00000464078 KRTAP1-1Q07627 177 aa15.55■□□□□ 0.08
HMGN1-210ENST00000464078 TSNAXIP1Q2TAA8 658 aa15.55■□□□□ 0.08
HMGN1-210ENST00000464078 FAM214BQ7L5A3 538 aa15.55■□□□□ 0.08
HMGN1-210ENST00000464078 CCDC116Q8IYX3 515 aa15.55■□□□□ 0.08
HMGN1-210ENST00000464078 METTL25Q8N6Q8 603 aa15.55■□□□□ 0.08
HMGN1-210ENST00000464078 ZNF610Q8N9Z0 462 aa15.55■□□□□ 0.08
HMGN1-210ENST00000464078 OR9A2Q8NGT5 310 aa15.55■□□□□ 0.08
HMGN1-210ENST00000464078 TMEM171Q8WVE6 324 aa15.55■□□□□ 0.08
HMGN1-210ENST00000464078 EFHD2Q96C19 240 aaPredicted RBP15.55■□□□□ 0.08
HMGN1-210ENST00000464078 ZC3HAV1LQ96H79 300 aaKnown RBP15.55■□□□□ 0.08
HMGN1-210ENST00000464078 REPIN1Q9BWE0 567 aaKnown RBP15.55■□□□□ 0.08
HMGN1-210ENST00000464078 DSN1Q9H410 356 aa15.55■□□□□ 0.08
HMGN1-210ENST00000464078 CXorf56Q9H5V9 222 aa15.55■□□□□ 0.08
HMGN1-210ENST00000464078 ACSS3Q9H6R3 686 aa15.55■□□□□ 0.08
HMGN1-210ENST00000464078 VPS29Q9UBQ0 182 aa15.55■□□□□ 0.08
HMGN1-210ENST00000464078 PROCRQ9UNN8 238 aa15.55■□□□□ 0.08
HMGN1-210ENST00000464078 ZNF337Q9Y3M9 751 aa15.55■□□□□ 0.08
HMGN1-210ENST00000464078 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP15.54■□□□□ 0.08
HMGN1-210ENST00000464078 OR2M5A3KFT3 312 aa15.54■□□□□ 0.08
HMGN1-210ENST00000464078 H0YC42 278 aa15.54■□□□□ 0.08
HMGN1-210ENST00000464078 KLF4O43474 513 aa15.54■□□□□ 0.08
HMGN1-210ENST00000464078 FADS1O60427 444 aa15.54■□□□□ 0.08
HMGN1-210ENST00000464078 NME6O75414 186 aaPredicted RBP15.54■□□□□ 0.08
HMGN1-210ENST00000464078 CRLF1O75462 422 aa15.54■□□□□ 0.08
HMGN1-210ENST00000464078 THBDP07204 575 aa15.54■□□□□ 0.08
HMGN1-210ENST00000464078 IL3P08700 152 aa15.54■□□□□ 0.08
HMGN1-210ENST00000464078 CTAGE8P0CG41 777 aa15.54■□□□□ 0.08
HMGN1-210ENST00000464078 HK1P19367 917 aa15.54■□□□□ 0.08
HMGN1-210ENST00000464078 TPD52P55327 224 aaPredicted RBP15.54■□□□□ 0.08
HMGN1-210ENST00000464078 PSG6Q00889 435 aa15.54■□□□□ 0.08
HMGN1-210ENST00000464078 CSTF3Q12996 717 aaKnown RBP15.54■□□□□ 0.08
HMGN1-210ENST00000464078 PON3Q15166 354 aa15.54■□□□□ 0.08
HMGN1-210ENST00000464078 TRADDQ15628 312 aa15.54■□□□□ 0.08
HMGN1-210ENST00000464078 UAP1Q16222 522 aaPredicted RBP15.54■□□□□ 0.08
HMGN1-210ENST00000464078 SH2D5Q6ZV89 423 aa15.54■□□□□ 0.08
HMGN1-210ENST00000464078 SLC44A2Q8IWA5 706 aaPredicted RBP15.54■□□□□ 0.08
HMGN1-210ENST00000464078 CTAGE4Q8IX94 777 aa15.54■□□□□ 0.08
HMGN1-210ENST00000464078 OR4N2Q8NGD1 307 aa15.54■□□□□ 0.08
HMGN1-210ENST00000464078 KAT2AQ92830 837 aa15.54■□□□□ 0.08
HMGN1-210ENST00000464078 MRRFQ96E11 262 aaKnown RBP15.54■□□□□ 0.08
HMGN1-210ENST00000464078 PTGES2Q9H7Z7 377 aa15.54■□□□□ 0.08
HMGN1-210ENST00000464078 PFDN4Q9NQP4 134 aa15.54■□□□□ 0.08
HMGN1-210ENST00000464078 FAM120CQ9NX05 1096 aaKnown RBP15.54■□□□□ 0.08
HMGN1-210ENST00000464078 TAS2R9Q9NYW1 312 aa15.54■□□□□ 0.08
HMGN1-210ENST00000464078 ZNF225Q9UK10 706 aa15.54■□□□□ 0.08
HMGN1-210ENST00000464078 OR10H1Q9Y4A9 318 aa15.54■□□□□ 0.08
HMGN1-210ENST00000464078 NBEAL1Q6ZS30 2694 aa15.54■□□□□ 0.08
HMGN1-210ENST00000464078 PPP6CO00743 305 aa15.53■□□□□ 0.08
HMGN1-210ENST00000464078 SEC14L5O43304 696 aa15.53■□□□□ 0.08
HMGN1-210ENST00000464078 SCO2O43819 266 aa15.53■□□□□ 0.08
HMGN1-210ENST00000464078 SOX30O94993 753 aa15.53■□□□□ 0.08
HMGN1-210ENST00000464078 ESRRBO95718 433 aa15.53■□□□□ 0.08
HMGN1-210ENST00000464078 COL6A2P12110 1019 aa15.53■□□□□ 0.08
HMGN1-210ENST00000464078 NR1H2P55055 460 aa15.53■□□□□ 0.08
HMGN1-210ENST00000464078 CLDN20P56880 219 aa15.53■□□□□ 0.08
HMGN1-210ENST00000464078 RPS3AP61247 264 aaKnown RBP15.53■□□□□ 0.08
HMGN1-210ENST00000464078 C2orf54Q08AI8 447 aa15.53■□□□□ 0.08
HMGN1-210ENST00000464078 CAPRIN1Q14444 709 aaKnown RBP15.53■□□□□ 0.08
HMGN1-210ENST00000464078 GLYR1Q49A26 553 aaPredicted RBP15.53■□□□□ 0.08
HMGN1-210ENST00000464078 CYP27C1Q4G0S4 372 aa15.53■□□□□ 0.08
HMGN1-210ENST00000464078 ZNF704Q6ZNC4 412 aaPredicted RBP15.53■□□□□ 0.08
HMGN1-210ENST00000464078 ZNF611Q8N823 705 aa15.53■□□□□ 0.08
HMGN1-210ENST00000464078 OR7G2Q8NG99 324 aa15.53■□□□□ 0.08
HMGN1-210ENST00000464078 GFM2Q969S9 779 aaKnown RBP15.53■□□□□ 0.08
HMGN1-210ENST00000464078 MTBPQ96DY7 904 aa15.53■□□□□ 0.08
HMGN1-210ENST00000464078 C1GALT1C1Q96EU7 318 aa15.53■□□□□ 0.08
HMGN1-210ENST00000464078 HBEGFQ99075 208 aa15.53■□□□□ 0.08
HMGN1-210ENST00000464078 MRPL57Q9BQC6 102 aaKnown RBP15.53■□□□□ 0.08
HMGN1-210ENST00000464078 TMEM204Q9BSN7 226 aa15.53■□□□□ 0.08
HMGN1-210ENST00000464078 SDHAF3Q9NRP4 125 aa15.53■□□□□ 0.08
HMGN1-210ENST00000464078 GIMAP4Q9NUV9 329 aa15.53■□□□□ 0.08
HMGN1-210ENST00000464078 AP4B1Q9Y6B7 739 aa15.53■□□□□ 0.08
HMGN1-210ENST00000464078 ABCA1O95477 2261 aa15.53■□□□□ 0.08
HMGN1-210ENST00000464078 PCNX3Q9H6A9 2034 aa15.52■□□□□ 0.08
HMGN1-210ENST00000464078 PCDH7O60245 1069 aa15.52■□□□□ 0.08
HMGN1-210ENST00000464078 COQ9O75208 318 aa15.52■□□□□ 0.08
HMGN1-210ENST00000464078 SLITRK5O94991 958 aa15.52■□□□□ 0.08
HMGN1-210ENST00000464078 KRT6AP02538 564 aa15.52■□□□□ 0.08
HMGN1-210ENST00000464078 KRT6BP04259 564 aa15.52■□□□□ 0.08
HMGN1-210ENST00000464078 PHBP35232 272 aa15.52■□□□□ 0.08
HMGN1-210ENST00000464078 KRT6CP48668 564 aa15.52■□□□□ 0.08
HMGN1-210ENST00000464078 RAE1P78406 368 aaKnown RBP15.52■□□□□ 0.08
HMGN1-210ENST00000464078 ZNF155Q12901 538 aaPredicted RBP15.52■□□□□ 0.08
HMGN1-210ENST00000464078 HEPACAMQ14CZ8 416 aa15.52■□□□□ 0.08
HMGN1-210ENST00000464078 TMEM44Q2T9K0 475 aa15.52■□□□□ 0.08
HMGN1-210ENST00000464078 RPS27LQ71UM5 84 aaKnown RBP15.52■□□□□ 0.08
HMGN1-210ENST00000464078 FAM9CQ8IZT9 166 aa15.52■□□□□ 0.08
HMGN1-210ENST00000464078 OR6K3Q8NGY3 331 aa15.52■□□□□ 0.08
HMGN1-210ENST00000464078 UHMK1Q8TAS1 419 aaKnown RBP15.52■□□□□ 0.08
HMGN1-210ENST00000464078 EXOSC8Q96B26 276 aaKnown RBP15.52■□□□□ 0.08
HMGN1-210ENST00000464078 C11orf24Q96F05 449 aaPredicted RBP15.52■□□□□ 0.08
HMGN1-210ENST00000464078 FUT8Q9BYC5 575 aa15.52■□□□□ 0.08
HMGN1-210ENST00000464078 KLHL4Q9C0H6 718 aa15.52■□□□□ 0.08
HMGN1-210ENST00000464078 MRPL46Q9H2W6 279 aaKnown RBP15.52■□□□□ 0.08
HMGN1-210ENST00000464078 SLC35C2Q9NQQ7 365 aa15.52■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms