RNA–Protein interactions for RNA: ENST00000463916.5

XRN1-203, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 1 (best) BASIC

Gene XRN1, Length 2,075 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-203ENST00000463916 HHATQ5VTY9 493 aa11.82□□□□□ -0.52
XRN1-203ENST00000463916 R3HCC1LQ7Z5L2 792 aaKnown RBP11.82□□□□□ -0.52
XRN1-203ENST00000463916 GALNT10Q86SR1 603 aa11.82□□□□□ -0.52
XRN1-203ENST00000463916 EID3Q8N140 333 aa11.82□□□□□ -0.52
XRN1-203ENST00000463916 SLC16A11Q8NCK7 471 aa11.82□□□□□ -0.52
XRN1-203ENST00000463916 NUP43Q8NFH3 380 aa11.82□□□□□ -0.52
XRN1-203ENST00000463916 FBXO30Q8TB52 745 aa11.82□□□□□ -0.52
XRN1-203ENST00000463916 COQ8BQ96D53 544 aa11.82□□□□□ -0.52
XRN1-203ENST00000463916 OTUB1Q96FW1 271 aaPredicted RBP11.82□□□□□ -0.52
XRN1-203ENST00000463916 NUF2Q9BZD4 464 aa11.82□□□□□ -0.52
XRN1-203ENST00000463916 WIF1Q9Y5W5 379 aa11.82□□□□□ -0.52
XRN1-203ENST00000463916 ABCA12Q86UK0 2595 aa11.81□□□□□ -0.52
XRN1-203ENST00000463916 FIGNL2A6NMB9 653 aa11.81□□□□□ -0.52
XRN1-203ENST00000463916 FADS1O60427 444 aa11.81□□□□□ -0.52
XRN1-203ENST00000463916 PRF1P14222 555 aa11.81□□□□□ -0.52
XRN1-203ENST00000463916 ADH7P40394 386 aa11.81□□□□□ -0.52
XRN1-203ENST00000463916 KIR3DL1P43629 444 aa11.81□□□□□ -0.52
XRN1-203ENST00000463916 RFX3P48380 749 aa11.81□□□□□ -0.52
XRN1-203ENST00000463916 EFR3AQ14156 821 aa11.81□□□□□ -0.52
XRN1-203ENST00000463916 MLC1Q15049 377 aa11.81□□□□□ -0.52
XRN1-203ENST00000463916 CPTPQ5TA50 214 aa11.81□□□□□ -0.52
XRN1-203ENST00000463916 VASNQ6EMK4 673 aa11.81□□□□□ -0.52
XRN1-203ENST00000463916 TMEM211Q6ICI0 200 aa11.81□□□□□ -0.52
XRN1-203ENST00000463916 SEM1Q6ZVN7 128 aa11.81□□□□□ -0.52
XRN1-203ENST00000463916 ZFP28Q8NHY6 868 aa11.81□□□□□ -0.52
XRN1-203ENST00000463916 RND1Q92730 232 aa11.81□□□□□ -0.52
XRN1-203ENST00000463916 FAM120BQ96EK7 910 aaKnown RBP11.81□□□□□ -0.52
XRN1-203ENST00000463916 YIPF4Q9BSR8 244 aa11.81□□□□□ -0.52
XRN1-203ENST00000463916 UCK2Q9BZX2 261 aa11.81□□□□□ -0.52
XRN1-203ENST00000463916 Q9N2J8 555 aa11.81□□□□□ -0.52
XRN1-203ENST00000463916 NUP214P35658 2090 aaPredicted RBP11.81□□□□□ -0.52
XRN1-203ENST00000463916 A0A1W2PRB8 838 aa11.8□□□□□ -0.52
XRN1-203ENST00000463916 WDR1O75083 606 aa11.8□□□□□ -0.52
XRN1-203ENST00000463916 CBR3O75828 277 aa11.8□□□□□ -0.52
XRN1-203ENST00000463916 IL33O95760 270 aa11.8□□□□□ -0.52
XRN1-203ENST00000463916 ACP2P11117 423 aa11.8□□□□□ -0.52
XRN1-203ENST00000463916 BMP7P18075 431 aa11.8□□□□□ -0.52
XRN1-203ENST00000463916 PRPS1L1P21108 318 aa11.8□□□□□ -0.52
XRN1-203ENST00000463916 EVI2BP34910 448 aa11.8□□□□□ -0.52
XRN1-203ENST00000463916 WNT3P56703 355 aa11.8□□□□□ -0.52
XRN1-203ENST00000463916 PSPHP78330 225 aa11.8□□□□□ -0.52
XRN1-203ENST00000463916 DECR1Q16698 335 aa11.8□□□□□ -0.52
XRN1-203ENST00000463916 APOOLQ6UXV4 268 aa11.8□□□□□ -0.52
XRN1-203ENST00000463916 B3GNT6Q6ZMB0 384 aa11.8□□□□□ -0.52
XRN1-203ENST00000463916 SZRD1Q7Z422 152 aa11.8□□□□□ -0.52
XRN1-203ENST00000463916 PLCZ1Q86YW0 608 aa11.8□□□□□ -0.52
XRN1-203ENST00000463916 ULK2Q8IYT8 1036 aa11.8□□□□□ -0.52
XRN1-203ENST00000463916 GPR151Q8TDV0 419 aa11.8□□□□□ -0.52
XRN1-203ENST00000463916 CA5BP1Q8WTZ4 195 aa11.8□□□□□ -0.52
XRN1-203ENST00000463916 SLC9A6Q92581 669 aa11.8□□□□□ -0.52
XRN1-203ENST00000463916 ARL8AQ96BM9 186 aa11.8□□□□□ -0.52
XRN1-203ENST00000463916 UGT2B28Q9BY64 529 aa11.8□□□□□ -0.52
XRN1-203ENST00000463916 COQ3Q9NZJ6 369 aa11.8□□□□□ -0.52
XRN1-203ENST00000463916 EIF3LQ9Y262 564 aaKnown RBP11.8□□□□□ -0.52
XRN1-203ENST00000463916 PKDREJQ9NTG1 2253 aa11.8□□□□□ -0.52
XRN1-203ENST00000463916 A0A0G2JNJ9 132 aa11.8□□□□□ -0.52
XRN1-203ENST00000463916 EMC8O43402 210 aa11.8□□□□□ -0.52
XRN1-203ENST00000463916 SCO2O43819 266 aa11.8□□□□□ -0.52
XRN1-203ENST00000463916 SNNO75324 88 aaPredicted RBP11.8□□□□□ -0.52
XRN1-203ENST00000463916 NKX2-2O95096 273 aa11.8□□□□□ -0.52
XRN1-203ENST00000463916 SNRPB2P08579 225 aaKnown RBP11.8□□□□□ -0.52
XRN1-203ENST00000463916 SLC18A1P54219 525 aa11.8□□□□□ -0.52
XRN1-203ENST00000463916 CLDN8P56748 225 aa11.8□□□□□ -0.52
XRN1-203ENST00000463916 MRPS22P82650 360 aaKnown RBP11.8□□□□□ -0.52
XRN1-203ENST00000463916 ZNHIT3Q15649 155 aaPredicted RBP11.8□□□□□ -0.52
XRN1-203ENST00000463916 DUSP5Q16690 384 aa11.8□□□□□ -0.52
XRN1-203ENST00000463916 NHSL2Q5HYW2 709 aa11.8□□□□□ -0.52
XRN1-203ENST00000463916 EXOSC6Q5RKV6 272 aaKnown RBP11.8□□□□□ -0.52
XRN1-203ENST00000463916 C1orf185Q5T7R7 199 aa11.8□□□□□ -0.52
XRN1-203ENST00000463916 MFSD12Q6NUT3 480 aa11.8□□□□□ -0.52
XRN1-203ENST00000463916 ZAR1Q86SH2 424 aa11.8□□□□□ -0.52
XRN1-203ENST00000463916 LILRB4Q8NHJ6 448 aa11.8□□□□□ -0.52
XRN1-203ENST00000463916 CEP70Q8NHQ1 597 aa11.8□□□□□ -0.52
XRN1-203ENST00000463916 MARVELD3Q96A59 401 aa11.8□□□□□ -0.52
XRN1-203ENST00000463916 RMND5BQ96G75 393 aaPredicted RBP11.8□□□□□ -0.52
XRN1-203ENST00000463916 CXorf36Q9H7Y0 433 aa11.8□□□□□ -0.52
XRN1-203ENST00000463916 FBXO34Q9NWN3 711 aa11.8□□□□□ -0.52
XRN1-203ENST00000463916 ASIC5Q9NY37 505 aa11.8□□□□□ -0.52
XRN1-203ENST00000463916 NOP53Q9NZM5 478 aaKnown RBP11.8□□□□□ -0.52
XRN1-203ENST00000463916 Q9UFV3 132 aa11.8□□□□□ -0.52
XRN1-203ENST00000463916 SNX8Q9Y5X2 465 aa11.8□□□□□ -0.52
XRN1-203ENST00000463916 PCNX3Q9H6A9 2034 aa11.8□□□□□ -0.52
XRN1-203ENST00000463916 KIAA1549Q9HCM3 1950 aa11.79□□□□□ -0.52
XRN1-203ENST00000463916 TOXO94900 526 aa11.79□□□□□ -0.52
XRN1-203ENST00000463916 SNUPNO95149 360 aaKnown RBP11.79□□□□□ -0.52
XRN1-203ENST00000463916 C6orf47O95873 294 aa11.79□□□□□ -0.52
XRN1-203ENST00000463916 C21orf58P58505 322 aa11.79□□□□□ -0.52
XRN1-203ENST00000463916 ACAD11Q709F0 780 aa11.79□□□□□ -0.52
XRN1-203ENST00000463916 MARCH3Q86UD3 253 aa11.79□□□□□ -0.52
XRN1-203ENST00000463916 LIX1LQ8IVB5 337 aa11.79□□□□□ -0.52
XRN1-203ENST00000463916 CDRT4Q8N9R6 151 aa11.79□□□□□ -0.52
XRN1-203ENST00000463916 OR10Q1Q8NGQ4 319 aa11.79□□□□□ -0.52
XRN1-203ENST00000463916 PSMA8Q8TAA3 256 aa11.79□□□□□ -0.52
XRN1-203ENST00000463916 WDYHV1Q96HA8 205 aa11.79□□□□□ -0.52
XRN1-203ENST00000463916 MS4A4EQ96PG1 132 aa11.79□□□□□ -0.52
XRN1-203ENST00000463916 C3orf14Q9HBI5 128 aa11.79□□□□□ -0.52
XRN1-203ENST00000463916 CHST11Q9NPF2 352 aa11.79□□□□□ -0.52
XRN1-203ENST00000463916 ZCCHC3Q9NUD5 404 aaKnown RBP11.79□□□□□ -0.52
XRN1-203ENST00000463916 PCDHGB3Q9Y5G1 929 aa11.79□□□□□ -0.52
XRN1-203ENST00000463916 NKX2-6A6NCS4 301 aa11.79□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms