RNA–Protein interactions for RNA: ENST00000463487.1

COL9A3-204, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 5

Gene COL9A3, Length 760 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-204ENST00000463487 ANGPTL4Q9BY76 406 aa18.17■□□□□ 0.5
COL9A3-204ENST00000463487 TRIM4Q9C037 500 aa18.17■□□□□ 0.5
COL9A3-204ENST00000463487 RAD21L1Q9H4I0 556 aa18.17■□□□□ 0.5
COL9A3-204ENST00000463487 IL1RL2Q9HB29 575 aa18.17■□□□□ 0.5
COL9A3-204ENST00000463487 SERHLQ9NQF3 203 aa18.17■□□□□ 0.5
COL9A3-204ENST00000463487 ABCG2Q9UNQ0 655 aa18.17■□□□□ 0.5
COL9A3-204ENST00000463487 NDUFAF1Q9Y375 327 aa18.17■□□□□ 0.5
COL9A3-204ENST00000463487 SEC23IPQ9Y6Y8 1000 aaKnown RBP18.17■□□□□ 0.5
COL9A3-204ENST00000463487 NUP214P35658 2090 aaPredicted RBP18.17■□□□□ 0.5
COL9A3-204ENST00000463487 A0A096LPI6 279 aa18.16■□□□□ 0.5
COL9A3-204ENST00000463487 GXYLT2A0PJZ3 443 aa18.16■□□□□ 0.5
COL9A3-204ENST00000463487 G3V3Y1 287 aa18.16■□□□□ 0.5
COL9A3-204ENST00000463487 KCNK2O95069 426 aa18.16■□□□□ 0.5
COL9A3-204ENST00000463487 GSNP06396 782 aa18.16■□□□□ 0.5
COL9A3-204ENST00000463487 SNRPB2P08579 225 aaKnown RBP18.16■□□□□ 0.5
COL9A3-204ENST00000463487 HPGDP15428 266 aa18.16■□□□□ 0.5
COL9A3-204ENST00000463487 ELAVL4P26378 380 aaKnown RBP18.16■□□□□ 0.5
COL9A3-204ENST00000463487 CDKN2CP42773 168 aa18.16■□□□□ 0.5
COL9A3-204ENST00000463487 DNASE1L1P49184 302 aa18.16■□□□□ 0.5
COL9A3-204ENST00000463487 ELOAQ14241 798 aaKnown RBP18.16■□□□□ 0.5
COL9A3-204ENST00000463487 CPEB4Q17RY0 729 aaKnown RBP eCLIP18.16■□□□□ 0.5
COL9A3-204ENST00000463487 EXOSC6Q5RKV6 272 aaKnown RBP18.16■□□□□ 0.5
COL9A3-204ENST00000463487 SLC2A7Q6PXP3 512 aa18.16■□□□□ 0.5
COL9A3-204ENST00000463487 BNC2Q6ZN30 1099 aaPredicted RBP18.16■□□□□ 0.5
COL9A3-204ENST00000463487 C16orf62Q7Z3J2 963 aa18.16■□□□□ 0.5
COL9A3-204ENST00000463487 CLEC4FQ8N1N0 589 aa18.16■□□□□ 0.5
COL9A3-204ENST00000463487 GTF2H4Q92759 462 aa18.16■□□□□ 0.5
COL9A3-204ENST00000463487 JSRP1Q96MG2 331 aaPredicted RBP18.16■□□□□ 0.5
COL9A3-204ENST00000463487 OR51I1Q9H343 314 aa18.16■□□□□ 0.5
COL9A3-204ENST00000463487 SAR1AQ9NR31 198 aa18.16■□□□□ 0.5
COL9A3-204ENST00000463487 SDHAF3Q9NRP4 125 aa18.16■□□□□ 0.5
COL9A3-204ENST00000463487 DEPPQ9NTK1 212 aa18.16■□□□□ 0.5
COL9A3-204ENST00000463487 EXPH5Q8NEV8 1989 aa18.15■□□□□ 0.5
COL9A3-204ENST00000463487 CYP4B1P13584 511 aa18.15■□□□□ 0.5
COL9A3-204ENST00000463487 EDN3P14138 238 aa18.15■□□□□ 0.5
COL9A3-204ENST00000463487 CAPN3P20807 821 aa18.15■□□□□ 0.5
COL9A3-204ENST00000463487 DRD4P21917 467 aa18.15■□□□□ 0.5
COL9A3-204ENST00000463487 PPIBP23284 216 aaKnown RBP18.15■□□□□ 0.5
COL9A3-204ENST00000463487 EVI2BP34910 448 aa18.15■□□□□ 0.5
COL9A3-204ENST00000463487 RPS26P62854 115 aaKnown RBP18.15■□□□□ 0.5
COL9A3-204ENST00000463487 HPCAP84074 193 aa18.15■□□□□ 0.5
COL9A3-204ENST00000463487 DCST2Q5T1A1 773 aa18.15■□□□□ 0.5
COL9A3-204ENST00000463487 TNFAIP8L2Q6P589 184 aaPredicted RBP18.15■□□□□ 0.5
COL9A3-204ENST00000463487 FIGNL1Q6PIW4 674 aa18.15■□□□□ 0.5
COL9A3-204ENST00000463487 ZNF527Q8NB42 609 aa18.15■□□□□ 0.5
COL9A3-204ENST00000463487 OTUB1Q96FW1 271 aaPredicted RBP18.15■□□□□ 0.5
COL9A3-204ENST00000463487 TMEM41AQ96HV5 264 aa18.15■□□□□ 0.5
COL9A3-204ENST00000463487 PHF12Q96QT6 1004 aa18.15■□□□□ 0.5
COL9A3-204ENST00000463487 NODALQ96S42 347 aa18.15■□□□□ 0.5
COL9A3-204ENST00000463487 BARD1Q99728 777 aaKnown RBP18.15■□□□□ 0.5
COL9A3-204ENST00000463487 TTTY12Q9BZ98 90 aa18.15■□□□□ 0.5
COL9A3-204ENST00000463487 TBL1XR1Q9BZK7 514 aa18.15■□□□□ 0.5
COL9A3-204ENST00000463487 ZFP64Q9NPA5 681 aa18.15■□□□□ 0.5
COL9A3-204ENST00000463487 THUMPD1Q9NXG2 353 aaKnown RBP18.15■□□□□ 0.5
COL9A3-204ENST00000463487 FAM53CQ9NYF3 392 aa18.15■□□□□ 0.5
COL9A3-204ENST00000463487 NTNG1Q9Y2I2 539 aa18.15■□□□□ 0.5
COL9A3-204ENST00000463487 CAPN7Q9Y6W3 813 aa18.15■□□□□ 0.5
COL9A3-204ENST00000463487 KALRNO60229 2985 aa18.15■□□□□ 0.5
COL9A3-204ENST00000463487 TMEM247A6NEH6 219 aa18.14■□□□□ 0.49
COL9A3-204ENST00000463487 BBIP1A8MTZ0 92 aa18.14■□□□□ 0.49
COL9A3-204ENST00000463487 SNX3O60493 162 aa18.14■□□□□ 0.49
COL9A3-204ENST00000463487 ICOSLGO75144 302 aa18.14■□□□□ 0.49
COL9A3-204ENST00000463487 MAN2A2P49641 1150 aa18.14■□□□□ 0.49
COL9A3-204ENST00000463487 PPIAP62937 165 aaKnown RBP18.14■□□□□ 0.49
COL9A3-204ENST00000463487 KRTCAP3Q53RY4 240 aa18.14■□□□□ 0.49
COL9A3-204ENST00000463487 RNF130Q86XS8 419 aa18.14■□□□□ 0.49
COL9A3-204ENST00000463487 GALNT11Q8NCW6 608 aa18.14■□□□□ 0.49
COL9A3-204ENST00000463487 OR5D16Q8NGK9 328 aa18.14■□□□□ 0.49
COL9A3-204ENST00000463487 FAM110BQ8TC76 370 aa18.14■□□□□ 0.49
COL9A3-204ENST00000463487 ZFP90Q8TF47 636 aa18.14■□□□□ 0.49
COL9A3-204ENST00000463487 XAGE5Q8WWM1 108 aa18.14■□□□□ 0.49
COL9A3-204ENST00000463487 MIB2Q96AX9 1013 aa18.14■□□□□ 0.49
COL9A3-204ENST00000463487 SLX1AQ9BQ83 275 aa18.14■□□□□ 0.49
COL9A3-204ENST00000463487 HOXD1Q9GZZ0 328 aa18.14■□□□□ 0.49
COL9A3-204ENST00000463487 TPT1P8Q9HAU6 139 aa18.14■□□□□ 0.49
COL9A3-204ENST00000463487 UBQLN4Q9NRR5 601 aa18.14■□□□□ 0.49
COL9A3-204ENST00000463487 TUBA8Q9NY65 449 aaPredicted RBP18.14■□□□□ 0.49
COL9A3-204ENST00000463487 CORO2BQ9UQ03 480 aa18.14■□□□□ 0.49
COL9A3-204ENST00000463487 A0A0G2JMM0 328 aa18.13■□□□□ 0.49
COL9A3-204ENST00000463487 A0A1W2PPB8 328 aa18.13■□□□□ 0.49
COL9A3-204ENST00000463487 A0A1W2PRS3 328 aa18.13■□□□□ 0.49
COL9A3-204ENST00000463487 KIR3DP1A8MWS1 328 aa18.13■□□□□ 0.49
COL9A3-204ENST00000463487 SCDO00767 359 aa18.13■□□□□ 0.49
COL9A3-204ENST00000463487 UTS2O95399 124 aa18.13■□□□□ 0.49
COL9A3-204ENST00000463487 FOXK1P85037 733 aa18.13■□□□□ 0.49
COL9A3-204ENST00000463487 KLF10Q13118 480 aa18.13■□□□□ 0.49
COL9A3-204ENST00000463487 UBAP2LQ14157 1087 aaKnown RBP18.13■□□□□ 0.49
COL9A3-204ENST00000463487 HYAL4Q2M3T9 481 aa18.13■□□□□ 0.49
COL9A3-204ENST00000463487 MMEL1Q495T6 779 aa18.13■□□□□ 0.49
COL9A3-204ENST00000463487 LRIF1Q5T3J3 769 aa18.13■□□□□ 0.49
COL9A3-204ENST00000463487 FAM109AQ8N4B1 249 aa18.13■□□□□ 0.49
COL9A3-204ENST00000463487 ST6GALNAC3Q8NDV1 305 aa18.13■□□□□ 0.49
COL9A3-204ENST00000463487 OR1J4Q8NGS1 313 aa18.13■□□□□ 0.49
COL9A3-204ENST00000463487 NMUR2Q9GZQ4 415 aa18.13■□□□□ 0.49
COL9A3-204ENST00000463487 PAIP1Q9H074 479 aaKnown RBP18.13■□□□□ 0.49
COL9A3-204ENST00000463487 QPCTLQ9NXS2 382 aa18.13■□□□□ 0.49
COL9A3-204ENST00000463487 SEC14L3Q9UDX4 400 aa18.13■□□□□ 0.49
COL9A3-204ENST00000463487 NIPSNAP3AQ9UFN0 247 aaPredicted RBP18.13■□□□□ 0.49
COL9A3-204ENST00000463487 LIPT1Q9Y234 373 aa18.13■□□□□ 0.49
COL9A3-204ENST00000463487 PCDHB14Q9Y5E9 798 aa18.13■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 72.3 ms