RNA–Protein interactions for RNA: ENST00000460822.1

HPS3-203, Transcript of HPS3, biogenesis of lysosomal organelles complex 2 subunit 1, humanhuman

TSL 2

Gene HPS3, Length 1,958 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS3-203ENST00000460822 MED20Q9H944 212 aa2.54□□□□□ -2
HPS3-203ENST00000460822 ZNF71Q9NQZ8 489 aaPredicted RBP2.54□□□□□ -2
HPS3-203ENST00000460822 FAM114A2Q9NRY5 505 aa2.54□□□□□ -2
HPS3-203ENST00000460822 C1orf123Q9NWV4 160 aa2.54□□□□□ -2
HPS3-203ENST00000460822 FKBP7Q9Y680 259 aa2.54□□□□□ -2
HPS3-203ENST00000460822 SLCO1B1Q9Y6L6 691 aa2.54□□□□□ -2
HPS3-203ENST00000460822 ABCA9Q8IUA7 1624 aa2.54□□□□□ -2
HPS3-203ENST00000460822 MYH14Q7Z406 1995 aaKnown RBP2.54□□□□□ -2
HPS3-203ENST00000460822 ABCC1P33527 1531 aa2.54□□□□□ -2
HPS3-203ENST00000460822 LRRC7Q96NW7 1537 aa2.54□□□□□ -2
HPS3-203ENST00000460822 PREX1Q8TCU6 1659 aa2.54□□□□□ -2
HPS3-203ENST00000460822 ADGRB1O14514 1584 aa2.54□□□□□ -2
HPS3-203ENST00000460822 GLI2P10070 1586 aa2.54□□□□□ -2
HPS3-203ENST00000460822 CFAP65Q6ZU64 1925 aaKnown RBP2.54□□□□□ -2
HPS3-203ENST00000460822 UGGT1Q9NYU2 1555 aa2.54□□□□□ -2
HPS3-203ENST00000460822 MAP2P11137 1827 aaKnown RBP2.54□□□□□ -2
HPS3-203ENST00000460822 MROH1Q8NDA8 1641 aa2.54□□□□□ -2
HPS3-203ENST00000460822 A0A0G2JLW4 131 aa2.54□□□□□ -2
HPS3-203ENST00000460822 GOLGA6L7A0A1B0GV03 622 aa2.54□□□□□ -2
HPS3-203ENST00000460822 ARHGEF35A5YM69 484 aa2.54□□□□□ -2
HPS3-203ENST00000460822 NCF1BA6NI72 391 aaPredicted RBP2.54□□□□□ -2
HPS3-203ENST00000460822 OR52A4PA6NMU1 304 aa2.54□□□□□ -2
HPS3-203ENST00000460822 VGLL3A8MV65 326 aa2.54□□□□□ -2
HPS3-203ENST00000460822 NCF1CA8MVU1 366 aaPredicted RBP2.54□□□□□ -2
HPS3-203ENST00000460822 TMCO5BA8MYB1 307 aa2.54□□□□□ -2
HPS3-203ENST00000460822 SMIM1B2RUZ4 78 aa2.54□□□□□ -2
HPS3-203ENST00000460822 H3BTX0 84 aa2.54□□□□□ -2
HPS3-203ENST00000460822 DNALI1O14645 258 aaPredicted RBP2.54□□□□□ -2
HPS3-203ENST00000460822 ZNF264O43296 627 aa2.54□□□□□ -2
HPS3-203ENST00000460822 FGF17O60258 216 aa2.54□□□□□ -2
HPS3-203ENST00000460822 TSPAN2O60636 221 aa2.54□□□□□ -2
HPS3-203ENST00000460822 JAK2O60674 1132 aa2.54□□□□□ -2
HPS3-203ENST00000460822 KHDRBS3O75525 346 aaKnown RBP2.54□□□□□ -2
HPS3-203ENST00000460822 AP2A2O94973 939 aa2.54□□□□□ -2
HPS3-203ENST00000460822 CAPN1P07384 714 aa2.54□□□□□ -2
HPS3-203ENST00000460822 F7P08709 466 aaPredicted RBP2.54□□□□□ -2
HPS3-203ENST00000460822 GSTT2P0CG29 244 aa2.54□□□□□ -2
HPS3-203ENST00000460822 GSTT2BP0CG30 244 aa2.54□□□□□ -2
HPS3-203ENST00000460822 ANXA8P13928 327 aa2.54□□□□□ -2
HPS3-203ENST00000460822 ZNF44P15621 663 aa2.54□□□□□ -2
HPS3-203ENST00000460822 GPR183P32249 361 aa2.54□□□□□ -2
HPS3-203ENST00000460822 MAP2K2P36507 400 aa2.54□□□□□ -2
HPS3-203ENST00000460822 ID1P41134 155 aa2.54□□□□□ -2
HPS3-203ENST00000460822 GRIA1P42261 906 aa2.54□□□□□ -2
HPS3-203ENST00000460822 CEBPDP49716 269 aaPredicted RBP2.54□□□□□ -2
HPS3-203ENST00000460822 RAG2P55895 527 aa2.54□□□□□ -2
HPS3-203ENST00000460822 RBBP4Q09028 425 aa2.54□□□□□ -2
HPS3-203ENST00000460822 ARL16Q0P5N6 197 aa2.54□□□□□ -2
HPS3-203ENST00000460822 SRSF5Q13243 272 aaKnown RBP2.54□□□□□ -2
HPS3-203ENST00000460822 MTF1Q14872 753 aa2.54□□□□□ -2
HPS3-203ENST00000460822 EXOC3L2Q2M3D2 409 aa2.54□□□□□ -2
HPS3-203ENST00000460822 ANXA8L1Q5VT79 327 aa2.54□□□□□ -2
HPS3-203ENST00000460822 PRAMEF20Q5VT98 475 aa2.54□□□□□ -2
HPS3-203ENST00000460822 C16orf87Q6PH81 154 aa2.54□□□□□ -2
HPS3-203ENST00000460822 SYT10Q6XYQ8 523 aa2.54□□□□□ -2
HPS3-203ENST00000460822 PHC2Q8IXK0 858 aa2.54□□□□□ -2
HPS3-203ENST00000460822 ZNF683Q8IZ20 524 aa2.54□□□□□ -2
HPS3-203ENST00000460822 CENPSQ8N2Z9 138 aa2.54□□□□□ -2
HPS3-203ENST00000460822 RAB42Q8N4Z0 105 aa2.54□□□□□ -2
HPS3-203ENST00000460822 FAM184AQ8NB25 1140 aa2.54□□□□□ -2
HPS3-203ENST00000460822 BBOF1Q8ND07 529 aa2.54□□□□□ -2
HPS3-203ENST00000460822 ICA1LQ8NDH6 482 aa2.54□□□□□ -2
HPS3-203ENST00000460822 CHDHQ8NE62 594 aaPredicted RBP2.54□□□□□ -2
HPS3-203ENST00000460822 NFAM1Q8NET5 270 aaPredicted RBP2.54□□□□□ -2
HPS3-203ENST00000460822 CCDC148Q8NFR7 591 aa2.54□□□□□ -2
HPS3-203ENST00000460822 OR5T2Q8NGG2 359 aa2.54□□□□□ -2
HPS3-203ENST00000460822 GIMAP1Q8WWP7 306 aa2.54□□□□□ -2
HPS3-203ENST00000460822 RASD2Q96D21 266 aa2.54□□□□□ -2
HPS3-203ENST00000460822 PINK1Q9BXM7 581 aa2.54□□□□□ -2
HPS3-203ENST00000460822 DCTPP1Q9H773 170 aa2.54□□□□□ -2
HPS3-203ENST00000460822 ELOVL3Q9HB03 270 aa2.54□□□□□ -2
HPS3-203ENST00000460822 KLK11Q9UBX7 282 aa2.54□□□□□ -2
HPS3-203ENST00000460822 IKZF3Q9UKT9 509 aa2.54□□□□□ -2
HPS3-203ENST00000460822 PSME2Q9UL46 239 aa2.54□□□□□ -2
HPS3-203ENST00000460822 FZR1Q9UM11 496 aa2.54□□□□□ -2
HPS3-203ENST00000460822 ICAM5Q9UMF0 924 aa2.54□□□□□ -2
HPS3-203ENST00000460822 ZFYVE16Q7Z3T8 1539 aa2.54□□□□□ -2
HPS3-203ENST00000460822 TULP4Q9NRJ4 1543 aa2.54□□□□□ -2
HPS3-203ENST00000460822 PLCH2O75038 1416 aa2.54□□□□□ -2
HPS3-203ENST00000460822 MYH15Q9Y2K3 1946 aa2.54□□□□□ -2
HPS3-203ENST00000460822 CHD2O14647 1828 aaKnown RBP2.53□□□□□ -2
HPS3-203ENST00000460822 FRMPD1Q5SYB0 1578 aa2.53□□□□□ -2
HPS3-203ENST00000460822 ADGRB3O60242 1522 aa2.53□□□□□ -2
HPS3-203ENST00000460822 IGHV4-4A0A075B6R2 117 aa2.53□□□□□ -2
HPS3-203ENST00000460822 SERTM2A0A1B0GWG4 89 aa2.53□□□□□ -2
HPS3-203ENST00000460822 LRRC30A6NM36 301 aa2.53□□□□□ -2
HPS3-203ENST00000460822 P2RY10O00398 339 aa2.53□□□□□ -2
HPS3-203ENST00000460822 CLDN5O00501 218 aa2.53□□□□□ -2
HPS3-203ENST00000460822 ARPC3O15145 178 aa2.53□□□□□ -2
HPS3-203ENST00000460822 CTAGE5O15320 804 aa2.53□□□□□ -2
HPS3-203ENST00000460822 ZSCAN12O43309 604 aa2.53□□□□□ -2
HPS3-203ENST00000460822 OR1F1O43749 312 aa2.53□□□□□ -2
HPS3-203ENST00000460822 MAGEC1O60732 1142 aa2.53□□□□□ -2
HPS3-203ENST00000460822 ANP32DO95626 131 aa2.53□□□□□ -2
HPS3-203ENST00000460822 FHP07954 510 aa2.53□□□□□ -2
HPS3-203ENST00000460822 GSTA1P08263 222 aa2.53□□□□□ -2
HPS3-203ENST00000460822 ERVK-10P10266 1014 aa2.53□□□□□ -2
HPS3-203ENST00000460822 CPN1P15169 458 aa2.53□□□□□ -2
HPS3-203ENST00000460822 PCMT1P22061 227 aa2.53□□□□□ -2
HPS3-203ENST00000460822 RFC2P35250 354 aa2.53□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms