RNA–Protein interactions for RNA: ENST00000460547.6

YIPF3-205, Transcript of Yip1 domain family member 3, humanhuman

TSL 1 (best)

Gene YIPF3, Length 1,674 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YIPF3-205ENST00000460547 LDHAL6BQ9BYZ2 381 aaPredicted RBP15.77■□□□□ 0.12
YIPF3-205ENST00000460547 FAM60AQ9NP50 221 aa15.77■□□□□ 0.12
YIPF3-205ENST00000460547 WARS2Q9UGM6 360 aaKnown RBP15.77■□□□□ 0.12
YIPF3-205ENST00000460547 SATB2Q9UPW6 733 aa15.77■□□□□ 0.12
YIPF3-205ENST00000460547 A0A1W2PPW3 197 aa15.76■□□□□ 0.11
YIPF3-205ENST00000460547 YKT6O15498 198 aa15.76■□□□□ 0.11
YIPF3-205ENST00000460547 SRPX2O60687 465 aaPredicted RBP15.76■□□□□ 0.11
YIPF3-205ENST00000460547 GABARAPO95166 117 aa15.76■□□□□ 0.11
YIPF3-205ENST00000460547 ZIC2O95409 532 aaPredicted RBP15.76■□□□□ 0.11
YIPF3-205ENST00000460547 ACP2P11117 423 aa15.76■□□□□ 0.11
YIPF3-205ENST00000460547 PDX1P52945 283 aa15.76■□□□□ 0.11
YIPF3-205ENST00000460547 TRIP6Q15654 476 aaKnown RBP15.76■□□□□ 0.11
YIPF3-205ENST00000460547 PODNL1Q6PEZ8 512 aa15.76■□□□□ 0.11
YIPF3-205ENST00000460547 DBX2Q6ZNG2 339 aa15.76■□□□□ 0.11
YIPF3-205ENST00000460547 OR4N5Q8IXE1 308 aa15.76■□□□□ 0.11
YIPF3-205ENST00000460547 MORN4Q8NDC4 146 aa15.76■□□□□ 0.11
YIPF3-205ENST00000460547 TMEM52Q8NDY8 209 aa15.76■□□□□ 0.11
YIPF3-205ENST00000460547 COL26A1Q96A83 441 aa15.76■□□□□ 0.11
YIPF3-205ENST00000460547 COPS4Q9BT78 406 aa15.76■□□□□ 0.11
YIPF3-205ENST00000460547 PIGUQ9H490 435 aa15.76■□□□□ 0.11
YIPF3-205ENST00000460547 MTHFD2LQ9H903 347 aaPredicted RBP15.76■□□□□ 0.11
YIPF3-205ENST00000460547 SLC13A4Q9UKG4 626 aa15.76■□□□□ 0.11
YIPF3-205ENST00000460547 IFT52Q9Y366 437 aa15.76■□□□□ 0.11
YIPF3-205ENST00000460547 NME6O75414 186 aaPredicted RBP15.76■□□□□ 0.11
YIPF3-205ENST00000460547 CDK1P06493 297 aa15.76■□□□□ 0.11
YIPF3-205ENST00000460547 CDK4P11802 303 aa15.76■□□□□ 0.11
YIPF3-205ENST00000460547 MAP2K4P45985 399 aa15.76■□□□□ 0.11
YIPF3-205ENST00000460547 SNRPGP62308 76 aaKnown RBP15.76■□□□□ 0.11
YIPF3-205ENST00000460547 SKP1P63208 163 aa15.76■□□□□ 0.11
YIPF3-205ENST00000460547 DUSP5Q16690 384 aa15.76■□□□□ 0.11
YIPF3-205ENST00000460547 INAVAQ3KP66 663 aa15.76■□□□□ 0.11
YIPF3-205ENST00000460547 TMEM201Q5SNT2 666 aa15.76■□□□□ 0.11
YIPF3-205ENST00000460547 C12orf73Q69YU5 71 aa15.76■□□□□ 0.11
YIPF3-205ENST00000460547 MCATQ8IVS2 390 aaKnown RBP15.76■□□□□ 0.11
YIPF3-205ENST00000460547 CDRT4Q8N9R6 151 aa15.76■□□□□ 0.11
YIPF3-205ENST00000460547 OR5T3Q8NGG3 340 aa15.76■□□□□ 0.11
YIPF3-205ENST00000460547 OR52P1PQ8NH57 321 aa15.76■□□□□ 0.11
YIPF3-205ENST00000460547 CDS1Q92903 461 aa15.76■□□□□ 0.11
YIPF3-205ENST00000460547 YIPF6Q96EC8 236 aa15.76■□□□□ 0.11
YIPF3-205ENST00000460547 TCTN2Q96GX1 697 aa15.76■□□□□ 0.11
YIPF3-205ENST00000460547 ZNF285Q96NJ3 590 aa15.76■□□□□ 0.11
YIPF3-205ENST00000460547 STACQ99469 402 aa15.76■□□□□ 0.11
YIPF3-205ENST00000460547 DCUN1D5Q9BTE7 237 aa15.76■□□□□ 0.11
YIPF3-205ENST00000460547 QRSL1Q9H0R6 528 aaKnown RBP15.76■□□□□ 0.11
YIPF3-205ENST00000460547 ANKHQ9HCJ1 492 aa15.76■□□□□ 0.11
YIPF3-205ENST00000460547 DUSP22Q9NRW4 184 aa15.76■□□□□ 0.11
YIPF3-205ENST00000460547 KLHL28Q9NXS3 571 aa15.76■□□□□ 0.11
YIPF3-205ENST00000460547 CHST2Q9Y4C5 530 aa15.76■□□□□ 0.11
YIPF3-205ENST00000460547 CACNA1EQ15878 2313 aa15.75■□□□□ 0.11
YIPF3-205ENST00000460547 SPAARA0A1B0GVQ0 90 aa15.75■□□□□ 0.11
YIPF3-205ENST00000460547 HCRTR1O43613 425 aa15.75■□□□□ 0.11
YIPF3-205ENST00000460547 FADS2O95864 444 aaKnown RBP15.75■□□□□ 0.11
YIPF3-205ENST00000460547 AK1P00568 194 aa15.75■□□□□ 0.11
YIPF3-205ENST00000460547 PROS1P07225 676 aa15.75■□□□□ 0.11
YIPF3-205ENST00000460547 THBS1P07996 1170 aa15.75■□□□□ 0.11
YIPF3-205ENST00000460547 MAP3K8P41279 467 aa15.75■□□□□ 0.11
YIPF3-205ENST00000460547 GRK6P43250 576 aa15.75■□□□□ 0.11
YIPF3-205ENST00000460547 ST13P50502 369 aaKnown RBP15.75■□□□□ 0.11
YIPF3-205ENST00000460547 MGAT2Q10469 447 aa15.75■□□□□ 0.11
YIPF3-205ENST00000460547 PRICKLE4Q2TBC4 344 aa15.75■□□□□ 0.11
YIPF3-205ENST00000460547 TYW3Q6IPR3 259 aaKnown RBP15.75■□□□□ 0.11
YIPF3-205ENST00000460547 C1orf94Q6P1W5 598 aa15.75■□□□□ 0.11
YIPF3-205ENST00000460547 VRK2Q86Y07 508 aa15.75■□□□□ 0.11
YIPF3-205ENST00000460547 OR4K5Q8NGD3 323 aa15.75■□□□□ 0.11
YIPF3-205ENST00000460547 LMX1AQ8TE12 382 aa15.75■□□□□ 0.11
YIPF3-205ENST00000460547 ADAMTS18Q8TE60 1221 aa15.75■□□□□ 0.11
YIPF3-205ENST00000460547 DIO2Q92813 273 aa15.75■□□□□ 0.11
YIPF3-205ENST00000460547 GGHQ92820 318 aa15.75■□□□□ 0.11
YIPF3-205ENST00000460547 PMM1Q92871 262 aa15.75■□□□□ 0.11
YIPF3-205ENST00000460547 CTHRC1Q96CG8 243 aa15.75■□□□□ 0.11
YIPF3-205ENST00000460547 ZNF350Q9GZX5 532 aa15.75■□□□□ 0.11
YIPF3-205ENST00000460547 CHRNA10Q9GZZ6 450 aa15.75■□□□□ 0.11
YIPF3-205ENST00000460547 POLR2J3Q9H1A7 115 aaKnown RBP15.75■□□□□ 0.11
YIPF3-205ENST00000460547 CACYBPQ9HB71 228 aaKnown RBP15.75■□□□□ 0.11
YIPF3-205ENST00000460547 MAT2BQ9NZL9 334 aa15.75■□□□□ 0.11
YIPF3-205ENST00000460547 CNOT2Q9NZN8 540 aaKnown RBP15.75■□□□□ 0.11
YIPF3-205ENST00000460547 ZNF443Q9Y2A4 671 aaPredicted RBP15.75■□□□□ 0.11
YIPF3-205ENST00000460547 WDR45Q9Y484 360 aa15.75■□□□□ 0.11
YIPF3-205ENST00000460547 BLACEA4D250 179 aa15.74■□□□□ 0.11
YIPF3-205ENST00000460547 LMO7DNF2Z398 122 aa15.74■□□□□ 0.11
YIPF3-205ENST00000460547 TP53P04637 393 aaPredicted RBP15.74■□□□□ 0.11
YIPF3-205ENST00000460547 RPS4Y1P22090 263 aaKnown RBP15.74■□□□□ 0.11
YIPF3-205ENST00000460547 BNIP3Q12983 259 aa15.74■□□□□ 0.11
YIPF3-205ENST00000460547 TARDBPQ13148 414 aaKnown RBP eCLIP15.74■□□□□ 0.11
YIPF3-205ENST00000460547 DUSP8Q13202 625 aa15.74■□□□□ 0.11
YIPF3-205ENST00000460547 CTF1Q16619 201 aa15.74■□□□□ 0.11
YIPF3-205ENST00000460547 TRMT12Q53H54 448 aaKnown RBP15.74■□□□□ 0.11
YIPF3-205ENST00000460547 EIPR1Q53HC9 387 aa15.74■□□□□ 0.11
YIPF3-205ENST00000460547 ENTPD8Q5MY95 495 aa15.74■□□□□ 0.11
YIPF3-205ENST00000460547 AP1ARQ63HQ0 302 aa15.74■□□□□ 0.11
YIPF3-205ENST00000460547 GATAD2AQ86YP4 633 aa15.74■□□□□ 0.11
YIPF3-205ENST00000460547 PEX5LQ8IYB4 626 aa15.74■□□□□ 0.11
YIPF3-205ENST00000460547 NLGN4XQ8N0W4 816 aa15.74■□□□□ 0.11
YIPF3-205ENST00000460547 TOR1AIP2Q8NFQ8 470 aa15.74■□□□□ 0.11
YIPF3-205ENST00000460547 TRUB1Q8WWH5 349 aaKnown RBP15.74■□□□□ 0.11
YIPF3-205ENST00000460547 SLC9A6Q92581 669 aa15.74■□□□□ 0.11
YIPF3-205ENST00000460547 HOXB13Q92826 284 aaPredicted RBP15.74■□□□□ 0.11
YIPF3-205ENST00000460547 ANKRD9Q96BM1 317 aaPredicted RBP15.74■□□□□ 0.11
YIPF3-205ENST00000460547 CDC6Q99741 560 aa15.74■□□□□ 0.11
YIPF3-205ENST00000460547 SAP130Q9H0E3 1048 aa15.74■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms