RNA–Protein interactions for RNA: ENST00000460485.1

ERCC3-205, Transcript of ERCC excision repair 3, TFIIH core complex helicase subunit, humanhuman

TSL 3

Gene ERCC3, Length 815 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3-205ENST00000460485 RANBP3LQ86VV4 465 aaPredicted RBP13.18□□□□□ -0.3
ERCC3-205ENST00000460485 P2RY8Q86VZ1 359 aa13.18□□□□□ -0.3
ERCC3-205ENST00000460485 ZNF619Q8N2I2 560 aa13.18□□□□□ -0.3
ERCC3-205ENST00000460485 OR7G2Q8NG99 324 aa13.18□□□□□ -0.3
ERCC3-205ENST00000460485 OR52P1PQ8NH57 321 aa13.18□□□□□ -0.3
ERCC3-205ENST00000460485 VANGL1Q8TAA9 524 aaPredicted RBP13.18□□□□□ -0.3
ERCC3-205ENST00000460485 HOXB13Q92826 284 aaPredicted RBP13.18□□□□□ -0.3
ERCC3-205ENST00000460485 ZNF350Q9GZX5 532 aa13.18□□□□□ -0.3
ERCC3-205ENST00000460485 TCEAL2Q9H3H9 227 aaPredicted RBP13.18□□□□□ -0.3
ERCC3-205ENST00000460485 SLC25A19Q9HC21 320 aa13.18□□□□□ -0.3
ERCC3-205ENST00000460485 ACOT13Q9NPJ3 140 aa13.18□□□□□ -0.3
ERCC3-205ENST00000460485 RLIMQ9NVW2 624 aa13.18□□□□□ -0.3
ERCC3-205ENST00000460485 WDR45Q9Y484 360 aa13.18□□□□□ -0.3
ERCC3-205ENST00000460485 LOC105369274A0A096LPK9 316 aa13.17□□□□□ -0.3
ERCC3-205ENST00000460485 LOC102723532A0A0G2JNH3 316 aa13.17□□□□□ -0.3
ERCC3-205ENST00000460485 PCNX2A6NKB5 2137 aa13.17□□□□□ -0.3
ERCC3-205ENST00000460485 STX11O75558 287 aa13.17□□□□□ -0.3
ERCC3-205ENST00000460485 NSA2O95478 260 aaKnown RBP13.17□□□□□ -0.3
ERCC3-205ENST00000460485 GASTP01350 101 aa13.17□□□□□ -0.3
ERCC3-205ENST00000460485 CCNYL3P0C7X3 344 aa13.17□□□□□ -0.3
ERCC3-205ENST00000460485 CSRP1P21291 193 aaKnown RBP13.17□□□□□ -0.3
ERCC3-205ENST00000460485 RPS4Y1P22090 263 aaKnown RBP13.17□□□□□ -0.3
ERCC3-205ENST00000460485 EPHA2P29317 976 aa13.17□□□□□ -0.3
ERCC3-205ENST00000460485 MPLP40238 635 aa13.17□□□□□ -0.3
ERCC3-205ENST00000460485 LSSP48449 732 aa13.17□□□□□ -0.3
ERCC3-205ENST00000460485 GP2P55259 537 aaKnown RBP13.17□□□□□ -0.3
ERCC3-205ENST00000460485 RGS8P57771 180 aaPredicted RBP13.17□□□□□ -0.3
ERCC3-205ENST00000460485 VSX2P58304 361 aaPredicted RBP13.17□□□□□ -0.3
ERCC3-205ENST00000460485 TAS2R41P59536 307 aa13.17□□□□□ -0.3
ERCC3-205ENST00000460485 FOXC1Q12948 553 aa13.17□□□□□ -0.3
ERCC3-205ENST00000460485 ZNHIT3Q15649 155 aaPredicted RBP13.17□□□□□ -0.3
ERCC3-205ENST00000460485 OGFOD3Q6PK18 319 aa13.17□□□□□ -0.3
ERCC3-205ENST00000460485 FRRS1Q6ZNA5 592 aa13.17□□□□□ -0.3
ERCC3-205ENST00000460485 AHSA2Q719I0 299 aa13.17□□□□□ -0.3
ERCC3-205ENST00000460485 ZNF367Q7RTV3 350 aa13.17□□□□□ -0.3
ERCC3-205ENST00000460485 OR4N4Q8N0Y3 316 aa13.17□□□□□ -0.3
ERCC3-205ENST00000460485 CLDN22Q8N7P3 220 aa13.17□□□□□ -0.3
ERCC3-205ENST00000460485 OR4K5Q8NGD3 323 aa13.17□□□□□ -0.3
ERCC3-205ENST00000460485 PIGXQ8TBF5 258 aa13.17□□□□□ -0.3
ERCC3-205ENST00000460485 SLC7A13Q8TCU3 470 aa13.17□□□□□ -0.3
ERCC3-205ENST00000460485 GNPDA2Q8TDQ7 276 aa13.17□□□□□ -0.3
ERCC3-205ENST00000460485 PATE1Q8WXA2 126 aa13.17□□□□□ -0.3
ERCC3-205ENST00000460485 UCN3Q969E3 161 aa13.17□□□□□ -0.3
ERCC3-205ENST00000460485 GTPBP3Q969Y2 492 aaKnown RBP13.17□□□□□ -0.3
ERCC3-205ENST00000460485 FCRL4Q96PJ5 515 aa13.17□□□□□ -0.3
ERCC3-205ENST00000460485 CSF3RQ99062 836 aa13.17□□□□□ -0.3
ERCC3-205ENST00000460485 SLC38A3Q99624 504 aa13.17□□□□□ -0.3
ERCC3-205ENST00000460485 SCNM1Q9BWG6 230 aa13.17□□□□□ -0.3
ERCC3-205ENST00000460485 FUNDC2Q9BWH2 189 aa13.17□□□□□ -0.3
ERCC3-205ENST00000460485 CDCA4Q9BXL8 241 aa13.17□□□□□ -0.3
ERCC3-205ENST00000460485 ITPAQ9BY32 194 aa13.17□□□□□ -0.3
ERCC3-205ENST00000460485 RASSF1Q9NS23 344 aa13.17□□□□□ -0.3
ERCC3-205ENST00000460485 ERVK-18Q9QC07 812 aa13.17□□□□□ -0.3
ERCC3-205ENST00000460485 REV1Q9UBZ9 1251 aa13.17□□□□□ -0.3
ERCC3-205ENST00000460485 PLCL2Q9UPR0 1127 aa13.17□□□□□ -0.3
ERCC3-205ENST00000460485 ZNF443Q9Y2A4 671 aaPredicted RBP13.17□□□□□ -0.3
ERCC3-205ENST00000460485 FLNBO75369 2602 aaKnown RBP13.17□□□□□ -0.3
ERCC3-205ENST00000460485 NUP210LQ5VU65 1888 aa13.16□□□□□ -0.3
ERCC3-205ENST00000460485 NBEAQ8NFP9 2946 aa13.16□□□□□ -0.3
ERCC3-205ENST00000460485 THADAQ6YHU6 1953 aa13.16□□□□□ -0.3
ERCC3-205ENST00000460485 COL5A1P20908 1838 aaPredicted RBP13.16□□□□□ -0.3
ERCC3-205ENST00000460485 CLDN4O14493 209 aa13.16□□□□□ -0.3
ERCC3-205ENST00000460485 AQP9O43315 295 aa13.16□□□□□ -0.3
ERCC3-205ENST00000460485 ZNF749O43361 778 aa13.16□□□□□ -0.3
ERCC3-205ENST00000460485 KIAA0513O60268 411 aa13.16□□□□□ -0.3
ERCC3-205ENST00000460485 CNOT3O75175 753 aaKnown RBP13.16□□□□□ -0.3
ERCC3-205ENST00000460485 EIF2S1P05198 315 aaKnown RBP13.16□□□□□ -0.3
ERCC3-205ENST00000460485 AVPR1BP47901 424 aa13.16□□□□□ -0.3
ERCC3-205ENST00000460485 SMSP52788 366 aa13.16□□□□□ -0.3
ERCC3-205ENST00000460485 PSMD4P55036 377 aaKnown RBP13.16□□□□□ -0.3
ERCC3-205ENST00000460485 NXPH1P58417 271 aa13.16□□□□□ -0.3
ERCC3-205ENST00000460485 RAB15P59190 212 aa13.16□□□□□ -0.3
ERCC3-205ENST00000460485 IGLV3-21P80748 117 aaPredicted RBP13.16□□□□□ -0.3
ERCC3-205ENST00000460485 SIM1P81133 766 aaPredicted RBP13.16□□□□□ -0.3
ERCC3-205ENST00000460485 MAP4K2Q12851 820 aa13.16□□□□□ -0.3
ERCC3-205ENST00000460485 OCLNQ16625 522 aa13.16□□□□□ -0.3
ERCC3-205ENST00000460485 DECR1Q16698 335 aa13.16□□□□□ -0.3
ERCC3-205ENST00000460485 PRICKLE4Q2TBC4 344 aa13.16□□□□□ -0.3
ERCC3-205ENST00000460485 TIMM50Q3ZCQ8 353 aa13.16□□□□□ -0.3
ERCC3-205ENST00000460485 WDR45BQ5MNZ6 344 aa13.16□□□□□ -0.3
ERCC3-205ENST00000460485 FAM111BQ6SJ93 734 aa13.16□□□□□ -0.3
ERCC3-205ENST00000460485 PTCHD4Q6ZW05 846 aa13.16□□□□□ -0.3
ERCC3-205ENST00000460485 MED25Q71SY5 747 aa13.16□□□□□ -0.3
ERCC3-205ENST00000460485 MCATQ8IVS2 390 aaKnown RBP13.16□□□□□ -0.3
ERCC3-205ENST00000460485 SLC43A2Q8N370 569 aa13.16□□□□□ -0.3
ERCC3-205ENST00000460485 STX19Q8N4C7 294 aa13.16□□□□□ -0.3
ERCC3-205ENST00000460485 ARL14Q8N4G2 192 aa13.16□□□□□ -0.3
ERCC3-205ENST00000460485 ARHGEF39Q8N4T4 335 aa13.16□□□□□ -0.3
ERCC3-205ENST00000460485 COX18Q8N8Q8 333 aa13.16□□□□□ -0.3
ERCC3-205ENST00000460485 MORN4Q8NDC4 146 aa13.16□□□□□ -0.3
ERCC3-205ENST00000460485 OR6T1Q8NGN1 323 aa13.16□□□□□ -0.3
ERCC3-205ENST00000460485 ACOT11Q8WXI4 607 aaPredicted RBP13.16□□□□□ -0.3
ERCC3-205ENST00000460485 ZCCHC14Q8WYQ9 949 aaKnown RBP13.16□□□□□ -0.3
ERCC3-205ENST00000460485 DIO2Q92813 273 aa13.16□□□□□ -0.3
ERCC3-205ENST00000460485 KAT2AQ92830 837 aa13.16□□□□□ -0.3
ERCC3-205ENST00000460485 CTHRC1Q96CG8 243 aa13.16□□□□□ -0.3
ERCC3-205ENST00000460485 YIPF6Q96EC8 236 aa13.16□□□□□ -0.3
ERCC3-205ENST00000460485 MVB12AQ96EY5 273 aa13.16□□□□□ -0.3
ERCC3-205ENST00000460485 C16orf58Q96GQ5 468 aa13.16□□□□□ -0.3
ERCC3-205ENST00000460485 ZDHHC12Q96GR4 267 aa13.16□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms