RNA–Protein interactions for RNA: ENST00000460408.5

RFC4-211, Transcript of replication factor C subunit 4, humanhuman

TSL 2

Gene RFC4, Length 628 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4-211ENST00000460408 SEL1L3Q68CR1 1132 aa2.62□□□□□ -1.99
RFC4-211ENST00000460408 RAET1GQ6H3X3 334 aa2.62□□□□□ -1.99
RFC4-211ENST00000460408 LEG1Q6P5S2 330 aa2.62□□□□□ -1.99
RFC4-211ENST00000460408 APOOLQ6UXV4 268 aa2.62□□□□□ -1.99
RFC4-211ENST00000460408 ZNF562Q6V9R5 426 aa2.62□□□□□ -1.99
RFC4-211ENST00000460408 SH2D6Q7Z4S9 175 aa2.62□□□□□ -1.99
RFC4-211ENST00000460408 CEACAM19Q7Z692 300 aa2.62□□□□□ -1.99
RFC4-211ENST00000460408 CCDC36Q8IYA8 594 aa2.62□□□□□ -1.99
RFC4-211ENST00000460408 ARL14Q8N4G2 192 aa2.62□□□□□ -1.99
RFC4-211ENST00000460408 BCORP1Q8N888 145 aa2.62□□□□□ -1.99
RFC4-211ENST00000460408 OR2L2Q8NH16 312 aa2.62□□□□□ -1.99
RFC4-211ENST00000460408 FNDC8Q8TC99 324 aa2.62□□□□□ -1.99
RFC4-211ENST00000460408 RANBP9Q96S59 729 aa2.62□□□□□ -1.99
RFC4-211ENST00000460408 TSPAN18Q96SJ8 248 aa2.62□□□□□ -1.99
RFC4-211ENST00000460408 PYGO2Q9BRQ0 406 aa2.62□□□□□ -1.99
RFC4-211ENST00000460408 RPP25Q9BUL9 199 aaKnown RBP2.62□□□□□ -1.99
RFC4-211ENST00000460408 RAB17Q9H0T7 212 aa2.62□□□□□ -1.99
RFC4-211ENST00000460408 RNF41Q9H4P4 317 aaPredicted RBP2.62□□□□□ -1.99
RFC4-211ENST00000460408 ELL3Q9HB65 397 aaPredicted RBP2.62□□□□□ -1.99
RFC4-211ENST00000460408 ESM1Q9NQ30 184 aa2.62□□□□□ -1.99
RFC4-211ENST00000460408 DHRS4-AS1Q9P1J3 65 aa2.62□□□□□ -1.99
RFC4-211ENST00000460408 ACTR3BQ9P1U1 418 aa2.62□□□□□ -1.99
RFC4-211ENST00000460408 ARMCX1Q9P291 453 aa2.62□□□□□ -1.99
RFC4-211ENST00000460408 P2RX2Q9UBL9 471 aa2.62□□□□□ -1.99
RFC4-211ENST00000460408 FZR1Q9UM11 496 aa2.62□□□□□ -1.99
RFC4-211ENST00000460408 SLC9A8Q9Y2E8 581 aa2.62□□□□□ -1.99
RFC4-211ENST00000460408 ADGBQ8N7X0 1667 aa2.62□□□□□ -1.99
RFC4-211ENST00000460408 MAP3K1Q13233 1512 aa2.62□□□□□ -1.99
RFC4-211ENST00000460408 RGPD1P0DJD0 1748 aa2.62□□□□□ -1.99
RFC4-211ENST00000460408 DISP2A7MBM2 1401 aa2.61□□□□□ -1.99
RFC4-211ENST00000460408 NCAPD2Q15021 1401 aa2.61□□□□□ -1.99
RFC4-211ENST00000460408 KDM5AP29375 1690 aaKnown RBP2.61□□□□□ -1.99
RFC4-211ENST00000460408 ZC3H13Q5T200 1668 aaKnown RBP2.61□□□□□ -1.99
RFC4-211ENST00000460408 CUL9Q8IWT3 2517 aa2.61□□□□□ -1.99
RFC4-211ENST00000460408 A0A087WWV3 80 aa2.61□□□□□ -1.99
RFC4-211ENST00000460408 A0A0J9YVX5 310 aa2.61□□□□□ -1.99
RFC4-211ENST00000460408 LRIT2A6NDA9 550 aa2.61□□□□□ -1.99
RFC4-211ENST00000460408 F8WDY8 70 aa2.61□□□□□ -1.99
RFC4-211ENST00000460408 ALOX15BO15296 676 aa2.61□□□□□ -1.99
RFC4-211ENST00000460408 TYROBPO43914 113 aa2.61□□□□□ -1.99
RFC4-211ENST00000460408 SDC3O75056 442 aa2.61□□□□□ -1.99
RFC4-211ENST00000460408 TRIM16O95361 564 aa2.61□□□□□ -1.99
RFC4-211ENST00000460408 APBB3O95704 486 aa2.61□□□□□ -1.99
RFC4-211ENST00000460408 NUDT14O95848 222 aa2.61□□□□□ -1.99
RFC4-211ENST00000460408 IGSF6O95976 241 aa2.61□□□□□ -1.99
RFC4-211ENST00000460408 GSTA1P08263 222 aa2.61□□□□□ -1.99
RFC4-211ENST00000460408 GHRP10912 638 aa2.61□□□□□ -1.99
RFC4-211ENST00000460408 ARF4P18085 180 aaPredicted RBP2.61□□□□□ -1.99
RFC4-211ENST00000460408 PTGER3P43115 390 aa2.61□□□□□ -1.99
RFC4-211ENST00000460408 SLC7A2P52569 658 aa2.61□□□□□ -1.99
RFC4-211ENST00000460408 GMFBP60983 142 aa2.61□□□□□ -1.99
RFC4-211ENST00000460408 TRA2BP62995 288 aaKnown RBP2.61□□□□□ -1.99
RFC4-211ENST00000460408 HERVK_113P63132 956 aa2.61□□□□□ -1.99
RFC4-211ENST00000460408 ERVK-8P63133 956 aa2.61□□□□□ -1.99
RFC4-211ENST00000460408 HTD2P86397 168 aa2.61□□□□□ -1.99
RFC4-211ENST00000460408 ABRAXAS2Q15018 415 aa2.61□□□□□ -1.99
RFC4-211ENST00000460408 HIGD2BQ4VC39 106 aa2.61□□□□□ -1.99
RFC4-211ENST00000460408 EIPR1Q53HC9 387 aa2.61□□□□□ -1.99
RFC4-211ENST00000460408 MS4A13Q5J8X5 152 aa2.61□□□□□ -1.99
RFC4-211ENST00000460408 LDLRAP1Q5SW96 308 aa2.61□□□□□ -1.99
RFC4-211ENST00000460408 PRSS48Q7RTY5 328 aa2.61□□□□□ -1.99
RFC4-211ENST00000460408 CDC20BQ86Y33 519 aa2.61□□□□□ -1.99
RFC4-211ENST00000460408 HIPK1Q86Z02 1210 aa2.61□□□□□ -1.99
RFC4-211ENST00000460408 ERC1Q8IUD2 1116 aa2.61□□□□□ -1.99
RFC4-211ENST00000460408 CERS5Q8N5B7 392 aa2.61□□□□□ -1.99
RFC4-211ENST00000460408 NFAM1Q8NET5 270 aaPredicted RBP2.61□□□□□ -1.99
RFC4-211ENST00000460408 OR52B4Q8NGK2 314 aa2.61□□□□□ -1.99
RFC4-211ENST00000460408 ADIPOR1Q96A54 375 aa2.61□□□□□ -1.99
RFC4-211ENST00000460408 C11orf24Q96F05 449 aaPredicted RBP2.61□□□□□ -1.99
RFC4-211ENST00000460408 PIWIL1Q96J94 861 aaKnown RBP2.61□□□□□ -1.99
RFC4-211ENST00000460408 ERVK-6Q9BXR3 956 aa2.61□□□□□ -1.99
RFC4-211ENST00000460408 TRIM9Q9C026 710 aa2.61□□□□□ -1.99
RFC4-211ENST00000460408 CCSER1Q9C0I3 900 aa2.61□□□□□ -1.99
RFC4-211ENST00000460408 ECT2Q9H8V3 914 aa2.61□□□□□ -1.99
RFC4-211ENST00000460408 ACTR8Q9H981 624 aa2.61□□□□□ -1.99
RFC4-211ENST00000460408 FAM114A2Q9NRY5 505 aa2.61□□□□□ -1.99
RFC4-211ENST00000460408 FOXJ3Q9UPW0 622 aa2.61□□□□□ -1.99
RFC4-211ENST00000460408 SHANK3Q9BYB0 1731 aa2.61□□□□□ -1.99
RFC4-211ENST00000460408 ARHGAP5Q13017 1502 aa2.61□□□□□ -1.99
RFC4-211ENST00000460408 DIP2AQ14689 1571 aa2.61□□□□□ -1.99
RFC4-211ENST00000460408 PNPLA6Q8IY17 1366 aa2.61□□□□□ -1.99
RFC4-211ENST00000460408 MIA2Q96PC5 1412 aa2.6□□□□□ -1.99
RFC4-211ENST00000460408 NCOA3Q9Y6Q9 1424 aa2.6□□□□□ -1.99
RFC4-211ENST00000460408 A2MP01023 1474 aa2.6□□□□□ -1.99
RFC4-211ENST00000460408 PZPP20742 1482 aa2.6□□□□□ -1.99
RFC4-211ENST00000460408 CAMSAP2Q08AD1 1489 aa2.6□□□□□ -1.99
RFC4-211ENST00000460408 TRAV9-2A0A087WT02 112 aa2.6□□□□□ -1.99
RFC4-211ENST00000460408 FAM230AA0A1W2PPH8 454 aa2.6□□□□□ -1.99
RFC4-211ENST00000460408 A0A1W2PQ72 361 aa2.6□□□□□ -1.99
RFC4-211ENST00000460408 MFSD2BA6NFX1 497 aa2.6□□□□□ -1.99
RFC4-211ENST00000460408 NPIPA2E9PIF3 369 aa2.6□□□□□ -1.99
RFC4-211ENST00000460408 H0YL77 283 aa2.6□□□□□ -1.99
RFC4-211ENST00000460408 LGALS8O00214 317 aa2.6□□□□□ -1.99
RFC4-211ENST00000460408 LRRTM2O43300 516 aa2.6□□□□□ -1.99
RFC4-211ENST00000460408 LANCL1O43813 399 aa2.6□□□□□ -1.99
RFC4-211ENST00000460408 GPRIN2O60269 458 aa2.6□□□□□ -1.99
RFC4-211ENST00000460408 SLC35G4P0C7Q5 338 aa2.6□□□□□ -1.99
RFC4-211ENST00000460408 GPC3P51654 580 aa2.6□□□□□ -1.99
RFC4-211ENST00000460408 ARHGDIAP52565 204 aa2.6□□□□□ -1.99
RFC4-211ENST00000460408 PPIAP62937 165 aaKnown RBP2.6□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms