RNA–Protein interactions for RNA: ENST00000460168.1

HERC4-207, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 2

Gene HERC4, Length 2,215 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-207ENST00000460168 DHRS12A0PJE2 317 aa9.74□□□□□ -0.85
HERC4-207ENST00000460168 TMEM82A0PJX8 343 aa9.74□□□□□ -0.85
HERC4-207ENST00000460168 J3KRW8 73 aa9.74□□□□□ -0.85
HERC4-207ENST00000460168 HRO43593 1189 aa9.74□□□□□ -0.85
HERC4-207ENST00000460168 CCNB2O95067 398 aa9.74□□□□□ -0.85
HERC4-207ENST00000460168 APOL3O95236 402 aa9.74□□□□□ -0.85
HERC4-207ENST00000460168 CFIP05156 583 aa9.74□□□□□ -0.85
HERC4-207ENST00000460168 DRD2P14416 443 aa9.74□□□□□ -0.85
HERC4-207ENST00000460168 TMEM44Q2T9K0 475 aa9.74□□□□□ -0.85
HERC4-207ENST00000460168 TUSC1Q2TAM9 212 aa9.74□□□□□ -0.85
HERC4-207ENST00000460168 ZBED5Q49AG3 693 aa9.74□□□□□ -0.85
HERC4-207ENST00000460168 DEFB134Q4QY38 66 aa9.74□□□□□ -0.85
HERC4-207ENST00000460168 FAM92BQ6ZTR7 304 aa9.74□□□□□ -0.85
HERC4-207ENST00000460168 ZNF767PQ75MW2 155 aa9.74□□□□□ -0.85
HERC4-207ENST00000460168 RNF44Q7L0R7 432 aa9.74□□□□□ -0.85
HERC4-207ENST00000460168 ABHD13Q7L211 337 aa9.74□□□□□ -0.85
HERC4-207ENST00000460168 CDH24Q86UP0 819 aa9.74□□□□□ -0.85
HERC4-207ENST00000460168 DTWD1Q8N5C7 304 aa9.74□□□□□ -0.85
HERC4-207ENST00000460168 C19orf47Q8N9M1 422 aaKnown RBP9.74□□□□□ -0.85
HERC4-207ENST00000460168 FAM47BQ8NA70 645 aa9.74□□□□□ -0.85
HERC4-207ENST00000460168 ZBTB44Q8NCP5 570 aa9.74□□□□□ -0.85
HERC4-207ENST00000460168 CANT1Q8WVQ1 401 aa9.74□□□□□ -0.85
HERC4-207ENST00000460168 TM4SF19Q96DZ7 209 aa9.74□□□□□ -0.85
HERC4-207ENST00000460168 MRPL48Q96GC5 212 aaKnown RBP9.74□□□□□ -0.85
HERC4-207ENST00000460168 ZNF845Q96IR2 970 aaPredicted RBP9.74□□□□□ -0.85
HERC4-207ENST00000460168 NSMCE2Q96MF7 247 aa9.74□□□□□ -0.85
HERC4-207ENST00000460168 MAP3K3Q99759 626 aa9.74□□□□□ -0.85
HERC4-207ENST00000460168 EFHD1Q9BUP0 239 aa9.74□□□□□ -0.85
HERC4-207ENST00000460168 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP9.74□□□□□ -0.85
HERC4-207ENST00000460168 THUMPD1Q9NXG2 353 aaKnown RBP9.74□□□□□ -0.85
HERC4-207ENST00000460168 TAS2R9Q9NYW1 312 aa9.74□□□□□ -0.85
HERC4-207ENST00000460168 VSX1Q9NZR4 365 aaPredicted RBP9.74□□□□□ -0.85
HERC4-207ENST00000460168 CDC14AQ9UNH5 594 aa9.74□□□□□ -0.85
HERC4-207ENST00000460168 AURKCQ9UQB9 309 aa9.74□□□□□ -0.85
HERC4-207ENST00000460168 AP4S1Q9Y587 144 aa9.74□□□□□ -0.85
HERC4-207ENST00000460168 SCN3AQ9NY46 2000 aa9.73□□□□□ -0.85
HERC4-207ENST00000460168 GLOD5A6NK44 160 aa9.73□□□□□ -0.85
HERC4-207ENST00000460168 CDK1P06493 297 aa9.73□□□□□ -0.85
HERC4-207ENST00000460168 RAB4AP20338 218 aa9.73□□□□□ -0.85
HERC4-207ENST00000460168 ZNF10P21506 573 aaPredicted RBP9.73□□□□□ -0.85
HERC4-207ENST00000460168 PPIBP23284 216 aaKnown RBP9.73□□□□□ -0.85
HERC4-207ENST00000460168 SOAT1P35610 550 aa9.73□□□□□ -0.85
HERC4-207ENST00000460168 PRIM2P49643 509 aa9.73□□□□□ -0.85
HERC4-207ENST00000460168 GSK3AP49840 483 aa9.73□□□□□ -0.85
HERC4-207ENST00000460168 MANFP55145 182 aaKnown RBP9.73□□□□□ -0.85
HERC4-207ENST00000460168 VSX2P58304 361 aaPredicted RBP9.73□□□□□ -0.85
HERC4-207ENST00000460168 ABHD18Q0P651 414 aa9.73□□□□□ -0.85
HERC4-207ENST00000460168 GAB1Q13480 694 aa9.73□□□□□ -0.85
HERC4-207ENST00000460168 ZNF273Q14593 569 aa9.73□□□□□ -0.85
HERC4-207ENST00000460168 DEFB110Q30KQ9 67 aa9.73□□□□□ -0.85
HERC4-207ENST00000460168 KRTCAP3Q53RY4 240 aa9.73□□□□□ -0.85
HERC4-207ENST00000460168 RNF111Q6ZNA4 994 aa9.73□□□□□ -0.85
HERC4-207ENST00000460168 LINC00299Q6ZSB3 139 aa9.73□□□□□ -0.85
HERC4-207ENST00000460168 NLRC3Q7RTR2 1065 aa9.73□□□□□ -0.85
HERC4-207ENST00000460168 PQLC1Q8N2U9 271 aa9.73□□□□□ -0.85
HERC4-207ENST00000460168 C10orf111Q8N326 155 aa9.73□□□□□ -0.85
HERC4-207ENST00000460168 DTWD2Q8NBA8 298 aa9.73□□□□□ -0.85
HERC4-207ENST00000460168 ZSCAN1Q8NBB4 408 aa9.73□□□□□ -0.85
HERC4-207ENST00000460168 TGM7Q96PF1 710 aa9.73□□□□□ -0.85
HERC4-207ENST00000460168 SLC35A5Q9BS91 424 aa9.73□□□□□ -0.85
HERC4-207ENST00000460168 DCUN1D5Q9BTE7 237 aa9.73□□□□□ -0.85
HERC4-207ENST00000460168 NLNQ9BYT8 704 aa9.73□□□□□ -0.85
HERC4-207ENST00000460168 WDR12Q9GZL7 423 aaKnown RBP9.73□□□□□ -0.85
HERC4-207ENST00000460168 SAV1Q9H4B6 383 aaPredicted RBP9.73□□□□□ -0.85
HERC4-207ENST00000460168 RPF2Q9H7B2 306 aaKnown RBP9.73□□□□□ -0.85
HERC4-207ENST00000460168 ZNF556Q9HAH1 456 aa9.73□□□□□ -0.85
HERC4-207ENST00000460168 C1GALT1Q9NS00 363 aa9.73□□□□□ -0.85
HERC4-207ENST00000460168 ADPRHL2Q9NX46 363 aa9.73□□□□□ -0.85
HERC4-207ENST00000460168 COQ3Q9NZJ6 369 aa9.73□□□□□ -0.85
HERC4-207ENST00000460168 ENPP5Q9UJA9 477 aa9.73□□□□□ -0.85
HERC4-207ENST00000460168 UTS2RQ9UKP6 389 aa9.73□□□□□ -0.85
HERC4-207ENST00000460168 CORO2BQ9UQ03 480 aa9.73□□□□□ -0.85
HERC4-207ENST00000460168 ATG4BQ9Y4P1 393 aa9.73□□□□□ -0.85
HERC4-207ENST00000460168 RNF215Q9Y6U7 377 aa9.73□□□□□ -0.85
HERC4-207ENST00000460168 SPEGQ15772 3267 aa9.73□□□□□ -0.85
HERC4-207ENST00000460168 C1orf226A1L170 272 aa9.72□□□□□ -0.85
HERC4-207ENST00000460168 A8MUA0 341 aa9.72□□□□□ -0.85
HERC4-207ENST00000460168 FAM220BPB1ANY3 271 aa9.72□□□□□ -0.85
HERC4-207ENST00000460168 MASP2O00187 686 aa9.72□□□□□ -0.85
HERC4-207ENST00000460168 NDUFS8O00217 210 aa9.72□□□□□ -0.85
HERC4-207ENST00000460168 NUDT21O43809 227 aaKnown RBP9.72□□□□□ -0.85
HERC4-207ENST00000460168 TBX19O60806 448 aa9.72□□□□□ -0.85
HERC4-207ENST00000460168 PRKRAO75569 313 aaKnown RBP9.72□□□□□ -0.85
HERC4-207ENST00000460168 MFN2O95140 757 aa9.72□□□□□ -0.85
HERC4-207ENST00000460168 C1QCP02747 245 aa9.72□□□□□ -0.85
HERC4-207ENST00000460168 CD63P08962 238 aa9.72□□□□□ -0.85
HERC4-207ENST00000460168 PSKH1P11801 424 aa9.72□□□□□ -0.85
HERC4-207ENST00000460168 GGT1P19440 569 aa9.72□□□□□ -0.85
HERC4-207ENST00000460168 SLC7A1P30825 629 aa9.72□□□□□ -0.85
HERC4-207ENST00000460168 UQCRC1P31930 480 aa9.72□□□□□ -0.85
HERC4-207ENST00000460168 CHI3L1P36222 383 aaPredicted RBP9.72□□□□□ -0.85
HERC4-207ENST00000460168 EPHA4P54764 986 aa9.72□□□□□ -0.85
HERC4-207ENST00000460168 BNC1Q01954 994 aa9.72□□□□□ -0.85
HERC4-207ENST00000460168 FOXO1Q12778 655 aa9.72□□□□□ -0.85
HERC4-207ENST00000460168 COL9A2Q14055 689 aaPredicted RBP9.72□□□□□ -0.85
HERC4-207ENST00000460168 PRSS53Q2L4Q9 553 aa9.72□□□□□ -0.85
HERC4-207ENST00000460168 NKAIN2Q5VXU1 208 aa9.72□□□□□ -0.85
HERC4-207ENST00000460168 MRM1Q6IN84 353 aaKnown RBP9.72□□□□□ -0.85
HERC4-207ENST00000460168 PAPD4Q6PIY7 484 aaKnown RBP9.72□□□□□ -0.85
HERC4-207ENST00000460168 ERMP1Q7Z2K6 904 aa9.72□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms