RNA–Protein interactions for RNA: ENST00000457055.1

VPS41-209, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 4

Gene VPS41, Length 465 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-209ENST00000457055 PAN3Q58A45 887 aaKnown RBP5.05□□□□□ -1.6
VPS41-209ENST00000457055 FAM199XQ6PEV8 388 aaPredicted RBP5.05□□□□□ -1.6
VPS41-209ENST00000457055 C17orf99Q6UX52 265 aa5.05□□□□□ -1.6
VPS41-209ENST00000457055 TMEM182Q6ZP80 229 aaPredicted RBP5.05□□□□□ -1.6
VPS41-209ENST00000457055 Q6ZPB1 254 aaPredicted RBP5.05□□□□□ -1.6
VPS41-209ENST00000457055 ERASQ7Z444 233 aa5.05□□□□□ -1.6
VPS41-209ENST00000457055 PIGWQ7Z7B1 504 aa5.05□□□□□ -1.6
VPS41-209ENST00000457055 GPALPP1Q8IXQ4 340 aa5.05□□□□□ -1.6
VPS41-209ENST00000457055 SPAG16Q8N0X2 631 aa5.05□□□□□ -1.6
VPS41-209ENST00000457055 ARHGAP24Q8N264 748 aa5.05□□□□□ -1.6
VPS41-209ENST00000457055 METTL4Q8N3J2 472 aa5.05□□□□□ -1.6
VPS41-209ENST00000457055 FBXO39Q8N4B4 442 aa5.05□□□□□ -1.6
VPS41-209ENST00000457055 KIF2BQ8N4N8 673 aa5.05□□□□□ -1.6
VPS41-209ENST00000457055 MARVELD2Q8N4S9 558 aa5.05□□□□□ -1.6
VPS41-209ENST00000457055 CERS5Q8N5B7 392 aa5.05□□□□□ -1.6
VPS41-209ENST00000457055 CDYL2Q8N8U2 506 aa5.05□□□□□ -1.6
VPS41-209ENST00000457055 TERB1Q8NA31 727 aa5.05□□□□□ -1.6
VPS41-209ENST00000457055 CNBD1Q8NA66 436 aa5.05□□□□□ -1.6
VPS41-209ENST00000457055 MFSD9Q8NBP5 474 aa5.05□□□□□ -1.6
VPS41-209ENST00000457055 STXBP6Q8NFX7 210 aa5.05□□□□□ -1.6
VPS41-209ENST00000457055 CADM4Q8NFZ8 388 aa5.05□□□□□ -1.6
VPS41-209ENST00000457055 OR56A3Q8NH54 315 aa5.05□□□□□ -1.6
VPS41-209ENST00000457055 GRPEL2Q8TAA5 225 aa5.05□□□□□ -1.6
VPS41-209ENST00000457055 HM13Q8TCT9 377 aa5.05□□□□□ -1.6
VPS41-209ENST00000457055 SCARB1Q8WTV0 552 aa5.05□□□□□ -1.6
VPS41-209ENST00000457055 SMPDL3AQ92484 453 aa5.05□□□□□ -1.6
VPS41-209ENST00000457055 SMPDL3BQ92485 455 aa5.05□□□□□ -1.6
VPS41-209ENST00000457055 SLC38A4Q969I6 547 aa5.05□□□□□ -1.6
VPS41-209ENST00000457055 ARSGQ96EG1 525 aa5.05□□□□□ -1.6
VPS41-209ENST00000457055 MYEOVQ96EZ4 313 aa5.05□□□□□ -1.6
VPS41-209ENST00000457055 NSL1Q96IY1 281 aa5.05□□□□□ -1.6
VPS41-209ENST00000457055 TMX3Q96JJ7 454 aa5.05□□□□□ -1.6
VPS41-209ENST00000457055 ZNF333Q96JL9 665 aa5.05□□□□□ -1.6
VPS41-209ENST00000457055 ZNF668Q96K58 619 aaPredicted RBP5.05□□□□□ -1.6
VPS41-209ENST00000457055 MRGPRX4Q96LA9 322 aa5.05□□□□□ -1.6
VPS41-209ENST00000457055 KLHL15Q96M94 604 aa5.05□□□□□ -1.6
VPS41-209ENST00000457055 TECTBQ96PL2 329 aa5.05□□□□□ -1.6
VPS41-209ENST00000457055 TMEM79Q9BSE2 394 aa5.05□□□□□ -1.6
VPS41-209ENST00000457055 NMUR2Q9GZQ4 415 aa5.05□□□□□ -1.6
VPS41-209ENST00000457055 PCBD2Q9H0N5 130 aa5.05□□□□□ -1.6
VPS41-209ENST00000457055 OR2AG1Q9H205 316 aa5.05□□□□□ -1.6
VPS41-209ENST00000457055 SPNS1Q9H2V7 528 aa5.05□□□□□ -1.6
VPS41-209ENST00000457055 OR51M1Q9H341 326 aa5.05□□□□□ -1.6
VPS41-209ENST00000457055 KLHL31Q9H511 634 aa5.05□□□□□ -1.6
VPS41-209ENST00000457055 HHATLQ9HCP6 504 aa5.05□□□□□ -1.6
VPS41-209ENST00000457055 OR2S2Q9NQN1 319 aa5.05□□□□□ -1.6
VPS41-209ENST00000457055 PXMP2Q9NR77 195 aa5.05□□□□□ -1.6
VPS41-209ENST00000457055 DDX19AQ9NUU7 478 aaKnown RBP5.05□□□□□ -1.6
VPS41-209ENST00000457055 PLK2Q9NYY3 685 aa5.05□□□□□ -1.6
VPS41-209ENST00000457055 MLXQ9UH92 298 aa5.05□□□□□ -1.6
VPS41-209ENST00000457055 ZNF639Q9UID6 485 aa5.05□□□□□ -1.6
VPS41-209ENST00000457055 FBXW11Q9UKB1 542 aa5.05□□□□□ -1.6
VPS41-209ENST00000457055 IKZF3Q9UKT9 509 aa5.05□□□□□ -1.6
VPS41-209ENST00000457055 NUBP2Q9Y5Y2 271 aa5.05□□□□□ -1.6
VPS41-209ENST00000457055 LAMB4A4D0S4 1761 aa5.05□□□□□ -1.6
VPS41-209ENST00000457055 RPTORQ8N122 1335 aa5.04□□□□□ -1.6
VPS41-209ENST00000457055 SALL1Q9NSC2 1324 aa5.04□□□□□ -1.6
VPS41-209ENST00000457055 A0A1B0GV72 72 aa5.04□□□□□ -1.6
VPS41-209ENST00000457055 A0A1W2PQF6 199 aa5.04□□□□□ -1.6
VPS41-209ENST00000457055 A0A1W2PQL4 384 aaPredicted RBP5.04□□□□□ -1.6
VPS41-209ENST00000457055 A0A1W2PRG6 482 aa5.04□□□□□ -1.6
VPS41-209ENST00000457055 ZNF487B1APH4 448 aa5.04□□□□□ -1.6
VPS41-209ENST00000457055 ANKRD66B4E2M5 251 aa5.04□□□□□ -1.6
VPS41-209ENST00000457055 TMEM189-UBE2V1I3L0A0 370 aa5.04□□□□□ -1.6
VPS41-209ENST00000457055 J3KTA2 159 aa5.04□□□□□ -1.6
VPS41-209ENST00000457055 KPNA3O00505 521 aaPredicted RBP5.04□□□□□ -1.6
VPS41-209ENST00000457055 CFLARO15519 480 aa5.04□□□□□ -1.6
VPS41-209ENST00000457055 PRAMEF2O60811 474 aa5.04□□□□□ -1.6
VPS41-209ENST00000457055 PAGE4O60829 102 aa5.04□□□□□ -1.6
VPS41-209ENST00000457055 UPK3AO75631 287 aa5.04□□□□□ -1.6
VPS41-209ENST00000457055 OR6A2O95222 327 aa5.04□□□□□ -1.6
VPS41-209ENST00000457055 SEC24AO95486 1093 aa5.04□□□□□ -1.6
VPS41-209ENST00000457055 LDOC1O95751 146 aaPredicted RBP5.04□□□□□ -1.6
VPS41-209ENST00000457055 BCL10O95999 233 aa5.04□□□□□ -1.6
VPS41-209ENST00000457055 HCKP08631 526 aa5.04□□□□□ -1.6
VPS41-209ENST00000457055 FBP1P09467 338 aa5.04□□□□□ -1.6
VPS41-209ENST00000457055 RD3LP0DJH9 198 aa5.04□□□□□ -1.6
VPS41-209ENST00000457055 ZNF12P17014 697 aa5.04□□□□□ -1.6
VPS41-209ENST00000457055 TPH1P17752 444 aa5.04□□□□□ -1.6
VPS41-209ENST00000457055 GLRA1P23415 457 aa5.04□□□□□ -1.6
VPS41-209ENST00000457055 HLA-DMAP28067 261 aa5.04□□□□□ -1.6
VPS41-209ENST00000457055 LAP3P28838 519 aa5.04□□□□□ -1.6
VPS41-209ENST00000457055 HNRNPH3P31942 346 aaKnown RBP5.04□□□□□ -1.6
VPS41-209ENST00000457055 RGS6P49758 472 aa5.04□□□□□ -1.6
VPS41-209ENST00000457055 PRKXP51817 358 aa5.04□□□□□ -1.6
VPS41-209ENST00000457055 PTENP60484 403 aa5.04□□□□□ -1.6
VPS41-209ENST00000457055 ERVS71-1P61550 626 aa5.04□□□□□ -1.6
VPS41-209ENST00000457055 POU6F2P78424 691 aaPredicted RBP5.04□□□□□ -1.6
VPS41-209ENST00000457055 DUSP2Q05923 314 aa5.04□□□□□ -1.6
VPS41-209ENST00000457055 GAGE1Q13065 139 aa5.04□□□□□ -1.6
VPS41-209ENST00000457055 PDIA2Q13087 525 aaKnown RBP5.04□□□□□ -1.6
VPS41-209ENST00000457055 CTBP1Q13363 440 aa5.04□□□□□ -1.6
VPS41-209ENST00000457055 AQP6Q13520 282 aa5.04□□□□□ -1.6
VPS41-209ENST00000457055 EIF4EBP2Q13542 120 aaPredicted RBP5.04□□□□□ -1.6
VPS41-209ENST00000457055 RUNX2Q13950 521 aa5.04□□□□□ -1.6
VPS41-209ENST00000457055 SERTAD2Q14140 314 aa5.04□□□□□ -1.6
VPS41-209ENST00000457055 TFDP1Q14186 410 aa5.04□□□□□ -1.6
VPS41-209ENST00000457055 KRT81Q14533 505 aa5.04□□□□□ -1.6
VPS41-209ENST00000457055 SLC29A2Q14542 456 aa5.04□□□□□ -1.6
VPS41-209ENST00000457055 TRAM2Q15035 370 aa5.04□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms