RNA–Protein interactions for RNA: ENST00000456315.6

DEPDC1-202, Transcript of DEP domain containing 1, humanhuman

TSL 1 (best) BASIC

Gene DEPDC1, Length 5,331 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC1-202ENST00000456315 ABCD4O14678 606 aa4.25□□□□□ -1.73
DEPDC1-202ENST00000456315 CA12O43570 354 aa4.25□□□□□ -1.73
DEPDC1-202ENST00000456315 SUSD5O60279 629 aa4.25□□□□□ -1.73
DEPDC1-202ENST00000456315 SC5DO75845 299 aa4.25□□□□□ -1.73
DEPDC1-202ENST00000456315 OLFM2O95897 454 aa4.25□□□□□ -1.73
DEPDC1-202ENST00000456315 HMBSP08397 361 aa4.25□□□□□ -1.73
DEPDC1-202ENST00000456315 SNRPBP14678 240 aaKnown RBP4.25□□□□□ -1.73
DEPDC1-202ENST00000456315 AMD1P17707 334 aa4.25□□□□□ -1.73
DEPDC1-202ENST00000456315 PTAFRP25105 342 aa4.25□□□□□ -1.73
DEPDC1-202ENST00000456315 SLC6A11P48066 632 aa4.25□□□□□ -1.73
DEPDC1-202ENST00000456315 NCF4Q15080 339 aa4.25□□□□□ -1.73
DEPDC1-202ENST00000456315 B3GNTL1Q67FW5 361 aaPredicted RBP4.25□□□□□ -1.73
DEPDC1-202ENST00000456315 KIAA1841Q6NSI8 718 aa4.25□□□□□ -1.73
DEPDC1-202ENST00000456315 LRRTM1Q86UE6 522 aa4.25□□□□□ -1.73
DEPDC1-202ENST00000456315 GPC2Q8N158 579 aa4.25□□□□□ -1.73
DEPDC1-202ENST00000456315 PAQR4Q8N4S7 273 aaPredicted RBP4.25□□□□□ -1.73
DEPDC1-202ENST00000456315 CLRN3Q8NCR9 226 aa4.25□□□□□ -1.73
DEPDC1-202ENST00000456315 ZFP3Q96NJ6 502 aa4.25□□□□□ -1.73
DEPDC1-202ENST00000456315 UBL7Q96S82 380 aaPredicted RBP4.25□□□□□ -1.73
DEPDC1-202ENST00000456315 NFKBIZQ9BYH8 718 aa4.25□□□□□ -1.73
DEPDC1-202ENST00000456315 PITHD1Q9GZP4 211 aaPredicted RBP4.25□□□□□ -1.73
DEPDC1-202ENST00000456315 EXTL2Q9UBQ6 330 aa4.25□□□□□ -1.73
DEPDC1-202ENST00000456315 ZNF346Q9UL40 294 aaKnown RBP4.25□□□□□ -1.73
DEPDC1-202ENST00000456315 HCN2Q9UL51 889 aa4.25□□□□□ -1.73
DEPDC1-202ENST00000456315 NOSIPQ9Y314 301 aaKnown RBP4.25□□□□□ -1.73
DEPDC1-202ENST00000456315 ABHD14A-ACY1A0A1B0GW23 586 aa4.25□□□□□ -1.73
DEPDC1-202ENST00000456315 CPED1A4D0V7 1026 aa4.25□□□□□ -1.73
DEPDC1-202ENST00000456315 POM121BA6NF01 834 aa4.25□□□□□ -1.73
DEPDC1-202ENST00000456315 IDSB3KWA1 339 aa4.25□□□□□ -1.73
DEPDC1-202ENST00000456315 PRAMEF26H0Y7S4 382 aa4.25□□□□□ -1.73
DEPDC1-202ENST00000456315 PIN1P1O15428 100 aa4.25□□□□□ -1.73
DEPDC1-202ENST00000456315 OR2A4O95047 310 aa4.25□□□□□ -1.73
DEPDC1-202ENST00000456315 VNN2O95498 520 aa4.25□□□□□ -1.73
DEPDC1-202ENST00000456315 ZGLP1P0C6A0 271 aa4.25□□□□□ -1.73
DEPDC1-202ENST00000456315 ALPPL2P10696 532 aa4.25□□□□□ -1.73
DEPDC1-202ENST00000456315 ACHEP22303 614 aa4.25□□□□□ -1.73
DEPDC1-202ENST00000456315 DCTDP32321 178 aa4.25□□□□□ -1.73
DEPDC1-202ENST00000456315 NSG1P42857 185 aa4.25□□□□□ -1.73
DEPDC1-202ENST00000456315 DCDC1P59894 354 aa4.25□□□□□ -1.73
DEPDC1-202ENST00000456315 IL2P60568 153 aa4.25□□□□□ -1.73
DEPDC1-202ENST00000456315 RPS11P62280 158 aaKnown RBP eCLIP4.25□□□□□ -1.73
DEPDC1-202ENST00000456315 KCNAB1Q14722 419 aa4.25□□□□□ -1.73
DEPDC1-202ENST00000456315 PLK5Q496M5 336 aa4.25□□□□□ -1.73
DEPDC1-202ENST00000456315 PYY3Q5JQD4 70 aa4.25□□□□□ -1.73
DEPDC1-202ENST00000456315 LY6G6FQ5SQ64 297 aa4.25□□□□□ -1.73
DEPDC1-202ENST00000456315 C12orf73Q69YU5 71 aa4.25□□□□□ -1.73
DEPDC1-202ENST00000456315 PGBD2Q6P3X8 592 aa4.25□□□□□ -1.73
DEPDC1-202ENST00000456315 FAM92BQ6ZTR7 304 aa4.25□□□□□ -1.73
DEPDC1-202ENST00000456315 OVCH2Q7RTZ1 564 aa4.25□□□□□ -1.73
DEPDC1-202ENST00000456315 SIRT6Q8N6T7 355 aa4.25□□□□□ -1.73
DEPDC1-202ENST00000456315 DBF4BQ8NFT6 615 aa4.25□□□□□ -1.73
DEPDC1-202ENST00000456315 OR56A4Q8NGH8 313 aa4.25□□□□□ -1.73
DEPDC1-202ENST00000456315 MOSPD2Q8NHP6 518 aa4.25□□□□□ -1.73
DEPDC1-202ENST00000456315 COQ8AQ8NI60 647 aa4.25□□□□□ -1.73
DEPDC1-202ENST00000456315 FCGR1BQ92637 280 aa4.25□□□□□ -1.73
DEPDC1-202ENST00000456315 CHFRQ96EP1 664 aa4.25□□□□□ -1.73
DEPDC1-202ENST00000456315 OR2A7Q96R45 310 aa4.25□□□□□ -1.73
DEPDC1-202ENST00000456315 SLC22A12Q96S37 553 aa4.25□□□□□ -1.73
DEPDC1-202ENST00000456315 INSM2Q96T92 566 aaPredicted RBP4.25□□□□□ -1.73
DEPDC1-202ENST00000456315 WRAP53Q9BUR4 548 aaKnown RBP4.25□□□□□ -1.73
DEPDC1-202ENST00000456315 APOL5Q9BWW9 433 aa4.25□□□□□ -1.73
DEPDC1-202ENST00000456315 SPATC1LQ9H0A9 340 aa4.25□□□□□ -1.73
DEPDC1-202ENST00000456315 ELAC1Q9H777 363 aaKnown RBP4.25□□□□□ -1.73
DEPDC1-202ENST00000456315 ANKHQ9HCJ1 492 aa4.25□□□□□ -1.73
DEPDC1-202ENST00000456315 IMPAD1Q9NX62 359 aa4.25□□□□□ -1.73
DEPDC1-202ENST00000456315 OPN4Q9UHM6 478 aa4.25□□□□□ -1.73
DEPDC1-202ENST00000456315 PCDHB9Q9Y5E1 797 aa4.25□□□□□ -1.73
DEPDC1-202ENST00000456315 NAV3Q8IVL0 2385 aa4.25□□□□□ -1.73
DEPDC1-202ENST00000456315 IGLV3-10A0A075B6K4 115 aa4.25□□□□□ -1.73
DEPDC1-202ENST00000456315 TRAV14DV4A0A0A6YYC5 116 aa4.25□□□□□ -1.73
DEPDC1-202ENST00000456315 FAM220BPB1ANY3 271 aa4.25□□□□□ -1.73
DEPDC1-202ENST00000456315 ANKRD66B4E2M5 251 aa4.25□□□□□ -1.73
DEPDC1-202ENST00000456315 RTCAO00442 366 aaKnown RBP4.25□□□□□ -1.73
DEPDC1-202ENST00000456315 GSTA4O15217 222 aa4.25□□□□□ -1.73
DEPDC1-202ENST00000456315 ORC5O43913 435 aa4.25□□□□□ -1.73
DEPDC1-202ENST00000456315 KDM4BO94953 1096 aa4.25□□□□□ -1.73
DEPDC1-202ENST00000456315 CPSF4O95639 269 aaKnown RBP4.25□□□□□ -1.73
DEPDC1-202ENST00000456315 ELNP15502 786 aa4.25□□□□□ -1.73
DEPDC1-202ENST00000456315 ZNF8P17098 575 aaPredicted RBP4.25□□□□□ -1.73
DEPDC1-202ENST00000456315 ANXA7P20073 488 aaKnown RBP4.25□□□□□ -1.73
DEPDC1-202ENST00000456315 PTX3P26022 381 aaPredicted RBP4.25□□□□□ -1.73
DEPDC1-202ENST00000456315 RAD52P43351 418 aa4.25□□□□□ -1.73
DEPDC1-202ENST00000456315 HNMTP50135 292 aa4.25□□□□□ -1.73
DEPDC1-202ENST00000456315 HCCSP53701 268 aa4.25□□□□□ -1.73
DEPDC1-202ENST00000456315 MAT1AQ00266 395 aaKnown RBP4.25□□□□□ -1.73
DEPDC1-202ENST00000456315 SERINC3Q13530 473 aa4.25□□□□□ -1.73
DEPDC1-202ENST00000456315 IL18Q14116 193 aa4.25□□□□□ -1.73
DEPDC1-202ENST00000456315 ZNF750Q32MQ0 723 aa4.25□□□□□ -1.73
DEPDC1-202ENST00000456315 PRRT3Q5FWE3 981 aa4.25□□□□□ -1.73
DEPDC1-202ENST00000456315 SPRYD7Q5W111 196 aa4.25□□□□□ -1.73
DEPDC1-202ENST00000456315 OTPQ5XKR4 325 aa4.25□□□□□ -1.73
DEPDC1-202ENST00000456315 ERICH5Q6P6B1 374 aa4.25□□□□□ -1.73
DEPDC1-202ENST00000456315 BHLHB9Q6PI77 547 aa4.25□□□□□ -1.73
DEPDC1-202ENST00000456315 METAP1DQ6UB28 335 aaPredicted RBP4.25□□□□□ -1.73
DEPDC1-202ENST00000456315 PDZD4Q76G19 769 aaPredicted RBP4.25□□□□□ -1.73
DEPDC1-202ENST00000456315 PLPPR4Q7Z2D5 763 aa4.25□□□□□ -1.73
DEPDC1-202ENST00000456315 C5orf24Q7Z6I8 188 aa4.25□□□□□ -1.73
DEPDC1-202ENST00000456315 UBE2Q1Q7Z7E8 422 aa4.25□□□□□ -1.73
DEPDC1-202ENST00000456315 OR8K3Q8NH51 312 aa4.25□□□□□ -1.73
DEPDC1-202ENST00000456315 SCARF2Q96GP6 870 aaPredicted RBP4.25□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms