RNA–Protein interactions for RNA: ENST00000455727.6

LDLR-202, Transcript of low density lipoprotein receptor, humanhuman

TSL 2 BASIC

Gene LDLR, Length 2,333 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDLR-202ENST00000455727 UNC80Q8N2C7 3258 aa14.08□□□□□ -0.16
LDLR-202ENST00000455727 A0A087WV62 115 aa14.08□□□□□ -0.16
LDLR-202ENST00000455727 FRS3O43559 492 aa14.08□□□□□ -0.16
LDLR-202ENST00000455727 MED26O95402 600 aa14.08□□□□□ -0.16
LDLR-202ENST00000455727 TNFP01375 233 aa14.08□□□□□ -0.16
LDLR-202ENST00000455727 ACP2P11117 423 aa14.08□□□□□ -0.16
LDLR-202ENST00000455727 SOX18P35713 384 aa14.08□□□□□ -0.16
LDLR-202ENST00000455727 CRYBB2P43320 205 aa14.08□□□□□ -0.16
LDLR-202ENST00000455727 AVPR1BP47901 424 aa14.08□□□□□ -0.16
LDLR-202ENST00000455727 CDC20Q12834 499 aa14.08□□□□□ -0.16
LDLR-202ENST00000455727 ZNF628Q5EBL2 1059 aa14.08□□□□□ -0.16
LDLR-202ENST00000455727 FHL5Q5TD97 284 aa14.08□□□□□ -0.16
LDLR-202ENST00000455727 LYSMD2Q8IV50 215 aa14.08□□□□□ -0.16
LDLR-202ENST00000455727 OR9Q1Q8NGQ5 310 aa14.08□□□□□ -0.16
LDLR-202ENST00000455727 OR10G6Q8NH81 332 aa14.08□□□□□ -0.16
LDLR-202ENST00000455727 RPLP0P6Q8NHW5 317 aa14.08□□□□□ -0.16
LDLR-202ENST00000455727 BAHD1Q8TBE0 780 aaPredicted RBP14.08□□□□□ -0.16
LDLR-202ENST00000455727 OSTF1Q92882 214 aa14.08□□□□□ -0.16
LDLR-202ENST00000455727 RERGQ96A58 199 aaPredicted RBP14.08□□□□□ -0.16
LDLR-202ENST00000455727 NECTIN4Q96NY8 510 aa14.08□□□□□ -0.16
LDLR-202ENST00000455727 SDF2Q99470 211 aa14.08□□□□□ -0.16
LDLR-202ENST00000455727 MCHR1Q99705 422 aa14.08□□□□□ -0.16
LDLR-202ENST00000455727 PIGUQ9H490 435 aa14.08□□□□□ -0.16
LDLR-202ENST00000455727 STUB1Q9UNE7 303 aa14.08□□□□□ -0.16
LDLR-202ENST00000455727 LOC105369274A0A096LPK9 316 aa14.07□□□□□ -0.16
LDLR-202ENST00000455727 LOC102723532A0A0G2JNH3 316 aa14.07□□□□□ -0.16
LDLR-202ENST00000455727 SNX4O95219 450 aa14.07□□□□□ -0.16
LDLR-202ENST00000455727 ATP1B1P05026 303 aa14.07□□□□□ -0.16
LDLR-202ENST00000455727 SOX3P41225 446 aa14.07□□□□□ -0.16
LDLR-202ENST00000455727 RABIFP47224 123 aa14.07□□□□□ -0.16
LDLR-202ENST00000455727 DUSP5Q16690 384 aa14.07□□□□□ -0.16
LDLR-202ENST00000455727 EIPR1Q53HC9 387 aa14.07□□□□□ -0.16
LDLR-202ENST00000455727 ZCCHC12Q6PEW1 402 aa14.07□□□□□ -0.16
LDLR-202ENST00000455727 PLEKHM3Q6ZWE6 761 aa14.07□□□□□ -0.16
LDLR-202ENST00000455727 ABI3BPQ7Z7G0 1075 aa14.07□□□□□ -0.16
LDLR-202ENST00000455727 OR4N4Q8N0Y3 316 aa14.07□□□□□ -0.16
LDLR-202ENST00000455727 PARP16Q8N5Y8 322 aa14.07□□□□□ -0.16
LDLR-202ENST00000455727 ZNF655Q8N720 491 aaPredicted RBP14.07□□□□□ -0.16
LDLR-202ENST00000455727 OR8D4Q8NGM9 314 aa14.07□□□□□ -0.16
LDLR-202ENST00000455727 SLC9A6Q92581 669 aa14.07□□□□□ -0.16
LDLR-202ENST00000455727 NUAK2Q9H093 628 aa14.07□□□□□ -0.16
LDLR-202ENST00000455727 IL21RQ9HBE5 538 aa14.07□□□□□ -0.16
LDLR-202ENST00000455727 ISYNA1Q9NPH2 558 aa14.07□□□□□ -0.16
LDLR-202ENST00000455727 IL20Q9NYY1 176 aa14.07□□□□□ -0.16
LDLR-202ENST00000455727 CRNNQ9UBG3 495 aaPredicted RBP14.07□□□□□ -0.16
LDLR-202ENST00000455727 CPNE7Q9UBL6 633 aa14.07□□□□□ -0.16
LDLR-202ENST00000455727 SATB2Q9UPW6 733 aa14.07□□□□□ -0.16
LDLR-202ENST00000455727 SPACA6W5XKT8 324 aa14.07□□□□□ -0.16
LDLR-202ENST00000455727 XIRP2A4UGR9 3374 aa14.07□□□□□ -0.16
LDLR-202ENST00000455727 OR5K4A6NMS3 321 aa14.07□□□□□ -0.16
LDLR-202ENST00000455727 KDM4EB2RXH2 506 aaPredicted RBP14.07□□□□□ -0.16
LDLR-202ENST00000455727 H0YGG7 62 aa14.07□□□□□ -0.16
LDLR-202ENST00000455727 KLF4O43474 513 aa14.07□□□□□ -0.16
LDLR-202ENST00000455727 PLOD3O60568 738 aa14.07□□□□□ -0.16
LDLR-202ENST00000455727 DNAJB6O75190 326 aa14.07□□□□□ -0.16
LDLR-202ENST00000455727 CPEP16870 476 aa14.07□□□□□ -0.16
LDLR-202ENST00000455727 GABRG2P18507 467 aa14.07□□□□□ -0.16
LDLR-202ENST00000455727 ARF3P61204 181 aaPredicted RBP14.07□□□□□ -0.16
LDLR-202ENST00000455727 UBE2IP63279 158 aaKnown RBP14.07□□□□□ -0.16
LDLR-202ENST00000455727 EEF1A1P68104 462 aaKnown RBP14.07□□□□□ -0.16
LDLR-202ENST00000455727 TMEM44Q2T9K0 475 aa14.07□□□□□ -0.16
LDLR-202ENST00000455727 MINDY4Q4G0A6 757 aa14.07□□□□□ -0.16
LDLR-202ENST00000455727 AGAP7PQ5VUJ5 663 aa14.07□□□□□ -0.16
LDLR-202ENST00000455727 MBOAT2Q6ZWT7 520 aa14.07□□□□□ -0.16
LDLR-202ENST00000455727 RNF44Q7L0R7 432 aa14.07□□□□□ -0.16
LDLR-202ENST00000455727 GDF7Q7Z4P5 450 aa14.07□□□□□ -0.16
LDLR-202ENST00000455727 SLC22A16Q86VW1 577 aa14.07□□□□□ -0.16
LDLR-202ENST00000455727 OR4N5Q8IXE1 308 aa14.07□□□□□ -0.16
LDLR-202ENST00000455727 PHC2Q8IXK0 858 aa14.07□□□□□ -0.16
LDLR-202ENST00000455727 FAM3CQ92520 227 aa14.07□□□□□ -0.16
LDLR-202ENST00000455727 SLC41A3Q96GZ6 507 aa14.07□□□□□ -0.16
LDLR-202ENST00000455727 FAM46AQ96IP4 442 aaKnown RBP14.07□□□□□ -0.16
LDLR-202ENST00000455727 ASPNQ9BXN1 380 aa14.07□□□□□ -0.16
LDLR-202ENST00000455727 TEX12Q9BXU0 123 aa14.07□□□□□ -0.16
LDLR-202ENST00000455727 MED17Q9NVC6 651 aa14.07□□□□□ -0.16
LDLR-202ENST00000455727 QPCTLQ9NXS2 382 aa14.07□□□□□ -0.16
LDLR-202ENST00000455727 NLGN3Q9NZ94 848 aa14.07□□□□□ -0.16
LDLR-202ENST00000455727 TCRBV21S2A2A0A5A6 115 aa14.06□□□□□ -0.16
LDLR-202ENST00000455727 TMEM129A0AVI4 362 aa14.06□□□□□ -0.16
LDLR-202ENST00000455727 HYKKA2RU49 373 aa14.06□□□□□ -0.16
LDLR-202ENST00000455727 ZNF670-ZNF695F2Z2N8 137 aa14.06□□□□□ -0.16
LDLR-202ENST00000455727 PRAMEF26H0Y7S4 382 aa14.06□□□□□ -0.16
LDLR-202ENST00000455727 SEMA4FO95754 770 aa14.06□□□□□ -0.16
LDLR-202ENST00000455727 MYL12AP19105 171 aa14.06□□□□□ -0.16
LDLR-202ENST00000455727 ETV5P41161 510 aa14.06□□□□□ -0.16
LDLR-202ENST00000455727 ETV1P50549 477 aa14.06□□□□□ -0.16
LDLR-202ENST00000455727 BNC1Q01954 994 aa14.06□□□□□ -0.16
LDLR-202ENST00000455727 CCDC190Q86UF4 302 aa14.06□□□□□ -0.16
LDLR-202ENST00000455727 NKAIN4Q8IVV8 208 aa14.06□□□□□ -0.16
LDLR-202ENST00000455727 CLDN22Q8N7P3 220 aa14.06□□□□□ -0.16
LDLR-202ENST00000455727 ANKK1Q8NFD2 765 aa14.06□□□□□ -0.16
LDLR-202ENST00000455727 PMM1Q92871 262 aa14.06□□□□□ -0.16
LDLR-202ENST00000455727 ITPKCQ96DU7 683 aa14.06□□□□□ -0.16
LDLR-202ENST00000455727 MSLNLQ96KJ4 702 aa14.06□□□□□ -0.16
LDLR-202ENST00000455727 CNPPD1Q9BV87 410 aa14.06□□□□□ -0.16
LDLR-202ENST00000455727 GSDMCQ9BYG8 508 aa14.06□□□□□ -0.16
LDLR-202ENST00000455727 ZNF350Q9GZX5 532 aa14.06□□□□□ -0.16
LDLR-202ENST00000455727 CPNE5Q9HCH3 593 aa14.06□□□□□ -0.16
LDLR-202ENST00000455727 DUSP22Q9NRW4 184 aa14.06□□□□□ -0.16
LDLR-202ENST00000455727 CNIH4Q9P003 139 aa14.06□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms