RNA–Protein interactions for RNA: ENST00000455596.5

HMGB3-205, Transcript of high mobility group box 3, humanhuman

APPRIS ALT2 TSL 1 (best)

Gene HMGB3, Length 793 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3-205ENST00000455596 GIMAP2Q9UG22 337 aa19.31■□□□□ 0.68
HMGB3-205ENST00000455596 FBXL2Q9UKC9 423 aa19.31■□□□□ 0.68
HMGB3-205ENST00000455596 NOTCH2Q04721 2471 aa19.31■□□□□ 0.68
HMGB3-205ENST00000455596 MED12Q93074 2177 aa19.3■□□□□ 0.68
HMGB3-205ENST00000455596 SCO2O43819 266 aa19.3■□□□□ 0.68
HMGB3-205ENST00000455596 IL33O95760 270 aa19.3■□□□□ 0.68
HMGB3-205ENST00000455596 IL2RAP01589 272 aa19.3■□□□□ 0.68
HMGB3-205ENST00000455596 TUBBP07437 444 aa19.3■□□□□ 0.68
HMGB3-205ENST00000455596 TIMP3P35625 211 aa19.3■□□□□ 0.68
HMGB3-205ENST00000455596 HPCAL1P37235 193 aa19.3■□□□□ 0.68
HMGB3-205ENST00000455596 RPL3P39023 403 aaKnown RBP19.3■□□□□ 0.68
HMGB3-205ENST00000455596 SERPINB4P48594 390 aa19.3■□□□□ 0.68
HMGB3-205ENST00000455596 RCAN2Q14206 197 aa19.3■□□□□ 0.68
HMGB3-205ENST00000455596 NSUN5P2Q63ZY6 315 aa19.3■□□□□ 0.68
HMGB3-205ENST00000455596 OR5M10Q6IEU7 315 aa19.3■□□□□ 0.68
HMGB3-205ENST00000455596 ENPP6Q6UWR7 440 aa19.3■□□□□ 0.68
HMGB3-205ENST00000455596 EXOC3L1Q86VI1 746 aa19.3■□□□□ 0.68
HMGB3-205ENST00000455596 NUP43Q8NFH3 380 aa19.3■□□□□ 0.68
HMGB3-205ENST00000455596 CEP70Q8NHQ1 597 aa19.3■□□□□ 0.68
HMGB3-205ENST00000455596 PKNOX2Q96KN3 472 aa19.3■□□□□ 0.68
HMGB3-205ENST00000455596 C3orf30Q96M34 536 aa19.3■□□□□ 0.68
HMGB3-205ENST00000455596 TRIB1Q96RU8 372 aa19.3■□□□□ 0.68
HMGB3-205ENST00000455596 EQTNQ9NQ60 294 aa19.3■□□□□ 0.68
HMGB3-205ENST00000455596 SDHAF3Q9NRP4 125 aa19.3■□□□□ 0.68
HMGB3-205ENST00000455596 TAS2R10Q9NYW0 307 aa19.3■□□□□ 0.68
HMGB3-205ENST00000455596 PPP4R1LQ9P1A2 415 aa19.3■□□□□ 0.68
HMGB3-205ENST00000455596 DKKL1Q9UK85 242 aa19.3■□□□□ 0.68
HMGB3-205ENST00000455596 ABCG2Q9UNQ0 655 aa19.3■□□□□ 0.68
HMGB3-205ENST00000455596 MRPS18CQ9Y3D5 142 aaKnown RBP19.3■□□□□ 0.68
HMGB3-205ENST00000455596 WDR91A4D1P6 747 aa19.29■□□□□ 0.68
HMGB3-205ENST00000455596 KDM4EB2RXH2 506 aaPredicted RBP19.29■□□□□ 0.68
HMGB3-205ENST00000455596 TM9SF1O15321 606 aa19.29■□□□□ 0.68
HMGB3-205ENST00000455596 KCNH1O95259 989 aa19.29■□□□□ 0.68
HMGB3-205ENST00000455596 HSPA4LO95757 839 aa19.29■□□□□ 0.68
HMGB3-205ENST00000455596 CEACAM8P31997 349 aaPredicted RBP19.29■□□□□ 0.68
HMGB3-205ENST00000455596 GABRA3P34903 492 aa19.29■□□□□ 0.68
HMGB3-205ENST00000455596 RFX3P48380 749 aa19.29■□□□□ 0.68
HMGB3-205ENST00000455596 PRKAG1P54619 331 aa19.29■□□□□ 0.68
HMGB3-205ENST00000455596 WNT3P56703 355 aa19.29■□□□□ 0.68
HMGB3-205ENST00000455596 VPS26BQ4G0F5 336 aa19.29■□□□□ 0.68
HMGB3-205ENST00000455596 CEP85LQ5SZL2 805 aa19.29■□□□□ 0.68
HMGB3-205ENST00000455596 SZRD1Q7Z422 152 aa19.29■□□□□ 0.68
HMGB3-205ENST00000455596 LURAP1LQ8IV03 231 aa19.29■□□□□ 0.68
HMGB3-205ENST00000455596 TRIM42Q8IWZ5 723 aa19.29■□□□□ 0.68
HMGB3-205ENST00000455596 DMRTC2Q8IXT2 367 aaPredicted RBP19.29■□□□□ 0.68
HMGB3-205ENST00000455596 TNIP2Q8NFZ5 429 aa19.29■□□□□ 0.68
HMGB3-205ENST00000455596 OR4K17Q8NGC6 315 aa19.29■□□□□ 0.68
HMGB3-205ENST00000455596 CENPHQ9H3R5 247 aa19.29■□□□□ 0.68
HMGB3-205ENST00000455596 ATP6V1HQ9UI12 483 aa19.29■□□□□ 0.68
HMGB3-205ENST00000455596 CD8B2A6NJW9 211 aa19.28■□□□□ 0.68
HMGB3-205ENST00000455596 ENO4A6NNW6 628 aa19.28■□□□□ 0.68
HMGB3-205ENST00000455596 DVL2O14641 736 aa19.28■□□□□ 0.68
HMGB3-205ENST00000455596 SCAMP2O15127 329 aaKnown RBP19.28■□□□□ 0.68
HMGB3-205ENST00000455596 BIRC5O15392 142 aa19.28■□□□□ 0.68
HMGB3-205ENST00000455596 FADS1O60427 444 aa19.28■□□□□ 0.68
HMGB3-205ENST00000455596 CPN1P15169 458 aa19.28■□□□□ 0.68
HMGB3-205ENST00000455596 CLK3P49761 638 aaKnown RBP19.28■□□□□ 0.68
HMGB3-205ENST00000455596 GFRA1P56159 465 aa19.28■□□□□ 0.68
HMGB3-205ENST00000455596 C6orf136Q5SQH8 315 aa19.28■□□□□ 0.68
HMGB3-205ENST00000455596 AAGABQ6PD74 315 aa19.28■□□□□ 0.68
HMGB3-205ENST00000455596 CROCCP2Q86T23 111 aa19.28■□□□□ 0.68
HMGB3-205ENST00000455596 CDRT4Q8N9R6 151 aa19.28■□□□□ 0.68
HMGB3-205ENST00000455596 FNDC5Q8NAU1 212 aa19.28■□□□□ 0.68
HMGB3-205ENST00000455596 NAXEQ8NCW5 288 aa19.28■□□□□ 0.68
HMGB3-205ENST00000455596 ZPLD1Q8TCW7 415 aa19.28■□□□□ 0.68
HMGB3-205ENST00000455596 GPR151Q8TDV0 419 aa19.28■□□□□ 0.68
HMGB3-205ENST00000455596 HOXB13Q92826 284 aaPredicted RBP19.28■□□□□ 0.68
HMGB3-205ENST00000455596 TUBGCP3Q96CW5 907 aa19.28■□□□□ 0.68
HMGB3-205ENST00000455596 LURAP1Q96LR2 239 aa19.28■□□□□ 0.68
HMGB3-205ENST00000455596 ZIM3Q96PE6 472 aa19.28■□□□□ 0.68
HMGB3-205ENST00000455596 MS4A4EQ96PG1 132 aa19.28■□□□□ 0.68
HMGB3-205ENST00000455596 C1orf50Q9BV19 199 aa19.28■□□□□ 0.68
HMGB3-205ENST00000455596 CALHM2Q9HA72 323 aa19.28■□□□□ 0.68
HMGB3-205ENST00000455596 FAM120CQ9NX05 1096 aaKnown RBP19.28■□□□□ 0.68
HMGB3-205ENST00000455596 FLRT3Q9NZU0 649 aa19.28■□□□□ 0.68
HMGB3-205ENST00000455596 NTMQ9P121 344 aa19.28■□□□□ 0.68
HMGB3-205ENST00000455596 NUP214P35658 2090 aaPredicted RBP19.28■□□□□ 0.68
HMGB3-205ENST00000455596 GXYLT2A0PJZ3 443 aa19.27■□□□□ 0.68
HMGB3-205ENST00000455596 EMC8O43402 210 aa19.27■□□□□ 0.68
HMGB3-205ENST00000455596 LYPLA1O75608 230 aaPredicted RBP19.27■□□□□ 0.68
HMGB3-205ENST00000455596 NKX2-2O95096 273 aa19.27■□□□□ 0.68
HMGB3-205ENST00000455596 SERPINE1P05121 402 aa19.27■□□□□ 0.68
HMGB3-205ENST00000455596 MYZAPP0CAP1 466 aa19.27■□□□□ 0.68
HMGB3-205ENST00000455596 DPP4P27487 766 aa19.27■□□□□ 0.68
HMGB3-205ENST00000455596 MAP3K8P41279 467 aa19.27■□□□□ 0.68
HMGB3-205ENST00000455596 DSCR4P56555 118 aaPredicted RBP19.27■□□□□ 0.68
HMGB3-205ENST00000455596 TLE4Q04727 773 aa19.27■□□□□ 0.68
HMGB3-205ENST00000455596 MLC1Q15049 377 aa19.27■□□□□ 0.68
HMGB3-205ENST00000455596 CHI3L2Q15782 390 aa19.27■□□□□ 0.68
HMGB3-205ENST00000455596 IL23RQ5VWK5 629 aa19.27■□□□□ 0.68
HMGB3-205ENST00000455596 OR7A2PQ8NGA2 310 aa19.27■□□□□ 0.68
HMGB3-205ENST00000455596 PIK3R3Q92569 461 aa19.27■□□□□ 0.68
HMGB3-205ENST00000455596 SLC9A6Q92581 669 aa19.27■□□□□ 0.68
HMGB3-205ENST00000455596 RMND5BQ96G75 393 aaPredicted RBP19.27■□□□□ 0.68
HMGB3-205ENST00000455596 SFXN2Q96NB2 322 aa19.27■□□□□ 0.68
HMGB3-205ENST00000455596 DSN1Q9H410 356 aa19.27■□□□□ 0.68
HMGB3-205ENST00000455596 SLC24A3Q9HC58 644 aa19.27■□□□□ 0.68
HMGB3-205ENST00000455596 GIMAP1-GIMAP5A0A087WTJ2 511 aa19.26■□□□□ 0.67
HMGB3-205ENST00000455596 A0A1W2PRB8 838 aa19.26■□□□□ 0.67
HMGB3-205ENST00000455596 MBD3L4A6NDZ8 208 aaPredicted RBP19.26■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms