RNA–Protein interactions for RNA: ENST00000454583.6

RIF1-207, Transcript of replication timing regulatory factor 1, humanhuman

TSL 2

Gene RIF1, Length 3,552 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1-207ENST00000454583 DUSP5Q16690 384 aa4.57□□□□□ -1.68
RIF1-207ENST00000454583 TBC1D25Q3MII6 688 aa4.57□□□□□ -1.68
RIF1-207ENST00000454583 C12orf73Q69YU5 71 aa4.57□□□□□ -1.68
RIF1-207ENST00000454583 FAM180BQ6P0A1 224 aa4.57□□□□□ -1.68
RIF1-207ENST00000454583 POMZP3Q6PJE2 187 aa4.57□□□□□ -1.68
RIF1-207ENST00000454583 LINC00299Q6ZSB3 139 aa4.57□□□□□ -1.68
RIF1-207ENST00000454583 CCDC103Q8IW40 242 aa4.57□□□□□ -1.68
RIF1-207ENST00000454583 TBC1D19Q8N5T2 526 aa4.57□□□□□ -1.68
RIF1-207ENST00000454583 ACBD4Q8NC06 268 aa4.57□□□□□ -1.68
RIF1-207ENST00000454583 OR2T12Q8NG77 320 aa4.57□□□□□ -1.68
RIF1-207ENST00000454583 CLHC1Q8NHS4 586 aa4.57□□□□□ -1.68
RIF1-207ENST00000454583 ZNF420Q8TAQ5 688 aaPredicted RBP4.57□□□□□ -1.68
RIF1-207ENST00000454583 CT55Q8WUE5 264 aa4.57□□□□□ -1.68
RIF1-207ENST00000454583 FAR1Q8WVX9 515 aa4.57□□□□□ -1.68
RIF1-207ENST00000454583 DIO2Q92813 273 aa4.57□□□□□ -1.68
RIF1-207ENST00000454583 STMN2Q93045 179 aa4.57□□□□□ -1.68
RIF1-207ENST00000454583 ARSGQ96EG1 525 aa4.57□□□□□ -1.68
RIF1-207ENST00000454583 LCORQ96JN0 433 aaPredicted RBP4.57□□□□□ -1.68
RIF1-207ENST00000454583 ZNF300Q96RE9 604 aaPredicted RBP4.57□□□□□ -1.68
RIF1-207ENST00000454583 NPAS1Q99742 590 aa4.57□□□□□ -1.68
RIF1-207ENST00000454583 OCSTAMPQ9BR26 566 aa4.57□□□□□ -1.68
RIF1-207ENST00000454583 CENPKQ9BS16 269 aa4.57□□□□□ -1.68
RIF1-207ENST00000454583 C9orf16Q9BUW7 83 aa4.57□□□□□ -1.68
RIF1-207ENST00000454583 VCX3BQ9H321 246 aa4.57□□□□□ -1.68
RIF1-207ENST00000454583 PIGUQ9H490 435 aa4.57□□□□□ -1.68
RIF1-207ENST00000454583 ELOVL6Q9H5J4 265 aa4.57□□□□□ -1.68
RIF1-207ENST00000454583 DNAJB12Q9NXW2 375 aaKnown RBP4.57□□□□□ -1.68
RIF1-207ENST00000454583 PHF11Q9UIL8 331 aa4.57□□□□□ -1.68
RIF1-207ENST00000454583 LOXL2Q9Y4K0 774 aa4.57□□□□□ -1.68
RIF1-207ENST00000454583 COMMD3-BMI1R4GMX3 469 aa4.57□□□□□ -1.68
RIF1-207ENST00000454583 SPTBP11277 2137 aa4.56□□□□□ -1.68
RIF1-207ENST00000454583 UNC13CQ8NB66 2214 aa4.56□□□□□ -1.68
RIF1-207ENST00000454583 FBN2P35556 2912 aa4.56□□□□□ -1.68
RIF1-207ENST00000454583 CCDC187A0A096LP49 1063 aa4.56□□□□□ -1.68
RIF1-207ENST00000454583 FAM149AA5PLN7 773 aa4.56□□□□□ -1.68
RIF1-207ENST00000454583 KDM1AO60341 852 aa4.56□□□□□ -1.68
RIF1-207ENST00000454583 CSO75390 466 aaKnown RBP4.56□□□□□ -1.68
RIF1-207ENST00000454583 PRKD3O94806 890 aa4.56□□□□□ -1.68
RIF1-207ENST00000454583 IL33O95760 270 aa4.56□□□□□ -1.68
RIF1-207ENST00000454583 S100BP04271 92 aaPredicted RBP4.56□□□□□ -1.68
RIF1-207ENST00000454583 THBS1P07996 1170 aa4.56□□□□□ -1.68
RIF1-207ENST00000454583 TBXA2RP21731 343 aa4.56□□□□□ -1.68
RIF1-207ENST00000454583 MATN1P21941 496 aa4.56□□□□□ -1.68
RIF1-207ENST00000454583 KCNJ5P48544 419 aa4.56□□□□□ -1.68
RIF1-207ENST00000454583 RPS4XP62701 263 aaKnown RBP4.56□□□□□ -1.68
RIF1-207ENST00000454583 RBBP4Q09028 425 aa4.56□□□□□ -1.68
RIF1-207ENST00000454583 GRM7Q14831 915 aa4.56□□□□□ -1.68
RIF1-207ENST00000454583 NR6A1Q15406 480 aa4.56□□□□□ -1.68
RIF1-207ENST00000454583 NTRK2Q16620 822 aa4.56□□□□□ -1.68
RIF1-207ENST00000454583 DEFB134Q4QY38 66 aa4.56□□□□□ -1.68
RIF1-207ENST00000454583 SYT6Q5T7P8 510 aaPredicted RBP4.56□□□□□ -1.68
RIF1-207ENST00000454583 FAM69BQ5VUD6 431 aa4.56□□□□□ -1.68
RIF1-207ENST00000454583 IGFL3Q6UXB1 125 aa4.56□□□□□ -1.68
RIF1-207ENST00000454583 FGD2Q7Z6J4 655 aa4.56□□□□□ -1.68
RIF1-207ENST00000454583 SPARTQ8N0X7 666 aa4.56□□□□□ -1.68
RIF1-207ENST00000454583 OR5K1Q8NHB7 308 aa4.56□□□□□ -1.68
RIF1-207ENST00000454583 PNPT1Q8TCS8 783 aaKnown RBP4.56□□□□□ -1.68
RIF1-207ENST00000454583 RPS4Y2Q8TD47 263 aa4.56□□□□□ -1.68
RIF1-207ENST00000454583 TTC9Q92623 222 aa4.56□□□□□ -1.68
RIF1-207ENST00000454583 DGCR14Q96DF8 476 aaKnown RBP4.56□□□□□ -1.68
RIF1-207ENST00000454583 C16orf58Q96GQ5 468 aa4.56□□□□□ -1.68
RIF1-207ENST00000454583 TRNT1Q96Q11 434 aaKnown RBP4.56□□□□□ -1.68
RIF1-207ENST00000454583 OR7D2Q96RA2 312 aa4.56□□□□□ -1.68
RIF1-207ENST00000454583 MYCBPQ99417 103 aaPredicted RBP4.56□□□□□ -1.68
RIF1-207ENST00000454583 SDF2Q99470 211 aa4.56□□□□□ -1.68
RIF1-207ENST00000454583 SLC38A3Q99624 504 aa4.56□□□□□ -1.68
RIF1-207ENST00000454583 ALOXE3Q9BYJ1 711 aa4.56□□□□□ -1.68
RIF1-207ENST00000454583 TRIM15Q9C019 465 aa4.56□□□□□ -1.68
RIF1-207ENST00000454583 RNF32Q9H0A6 362 aa4.56□□□□□ -1.68
RIF1-207ENST00000454583 KLHL25Q9H0H3 589 aa4.56□□□□□ -1.68
RIF1-207ENST00000454583 KLK13Q9UKR3 277 aa4.56□□□□□ -1.68
RIF1-207ENST00000454583 ICAM5Q9UMF0 924 aa4.56□□□□□ -1.68
RIF1-207ENST00000454583 EIF3LQ9Y262 564 aaKnown RBP4.56□□□□□ -1.68
RIF1-207ENST00000454583 ZNF451Q9Y4E5 1061 aa4.56□□□□□ -1.68
RIF1-207ENST00000454583 AK5Q9Y6K8 562 aa4.56□□□□□ -1.68
RIF1-207ENST00000454583 CFAP46Q8IYW2 2715 aa4.56□□□□□ -1.68
RIF1-207ENST00000454583 C21orf140B9A014 251 aa4.56□□□□□ -1.68
RIF1-207ENST00000454583 KCNK2O95069 426 aa4.56□□□□□ -1.68
RIF1-207ENST00000454583 LGI1O95970 557 aa4.56□□□□□ -1.68
RIF1-207ENST00000454583 UBTFL6P0CB48 400 aaPredicted RBP4.56□□□□□ -1.68
RIF1-207ENST00000454583 NR2F6P10588 404 aa4.56□□□□□ -1.68
RIF1-207ENST00000454583 DUSP3P51452 185 aaPredicted RBP4.56□□□□□ -1.68
RIF1-207ENST00000454583 IST1P53990 364 aa4.56□□□□□ -1.68
RIF1-207ENST00000454583 CLDN15P56746 228 aa4.56□□□□□ -1.68
RIF1-207ENST00000454583 EGR4Q05215 589 aa4.56□□□□□ -1.68
RIF1-207ENST00000454583 MED21Q13503 144 aa4.56□□□□□ -1.68
RIF1-207ENST00000454583 VWA2Q5GFL6 755 aa4.56□□□□□ -1.68
RIF1-207ENST00000454583 RBM48Q5RL73 367 aaKnown RBP4.56□□□□□ -1.68
RIF1-207ENST00000454583 PLAG1Q6DJT9 500 aa4.56□□□□□ -1.68
RIF1-207ENST00000454583 ZNF773Q6PK81 442 aa4.56□□□□□ -1.68
RIF1-207ENST00000454583 SIAH3Q8IW03 269 aa4.56□□□□□ -1.68
RIF1-207ENST00000454583 ENTHD1Q8IYW4 607 aa4.56□□□□□ -1.68
RIF1-207ENST00000454583 FAM9CQ8IZT9 166 aa4.56□□□□□ -1.68
RIF1-207ENST00000454583 EXD3Q8N9H8 876 aa4.56□□□□□ -1.68
RIF1-207ENST00000454583 ICA1LQ8NDH6 482 aa4.56□□□□□ -1.68
RIF1-207ENST00000454583 AGBL5Q8NDL9 886 aa4.56□□□□□ -1.68
RIF1-207ENST00000454583 OR4N2Q8NGD1 307 aa4.56□□□□□ -1.68
RIF1-207ENST00000454583 C16orf52Q8NHV5 167 aa4.56□□□□□ -1.68
RIF1-207ENST00000454583 POC1BQ8TC44 478 aa4.56□□□□□ -1.68
RIF1-207ENST00000454583 ADGRG7Q96K78 797 aa4.56□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms