RNA–Protein interactions for RNA: ENST00000452447.1

CHD3-206, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 5

Gene CHD3, Length 1,573 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-206ENST00000452447 GFRA1P56159 465 aa11.71□□□□□ -0.54
CHD3-206ENST00000452447 HSPB3Q12988 150 aa11.71□□□□□ -0.54
CHD3-206ENST00000452447 GAB1Q13480 694 aa11.71□□□□□ -0.54
CHD3-206ENST00000452447 SH3GL2Q99962 352 aa11.71□□□□□ -0.54
CHD3-206ENST00000452447 TUBA1CQ9BQE3 449 aa11.71□□□□□ -0.54
CHD3-206ENST00000452447 ANKZF1Q9H8Y5 726 aa11.71□□□□□ -0.54
CHD3-206ENST00000452447 EML4Q9HC35 981 aaKnown RBP11.71□□□□□ -0.54
CHD3-206ENST00000452447 RPH3AQ9Y2J0 694 aaPredicted RBP11.71□□□□□ -0.54
CHD3-206ENST00000452447 MRPS18CQ9Y3D5 142 aaKnown RBP11.71□□□□□ -0.54
CHD3-206ENST00000452447 C2CD3Q4AC94 2353 aa11.7□□□□□ -0.54
CHD3-206ENST00000452447 TTC36A6NLP5 189 aa11.7□□□□□ -0.54
CHD3-206ENST00000452447 EEF1E1-BLOC1S5C9J1V9 151 aa11.7□□□□□ -0.54
CHD3-206ENST00000452447 NPIPB8E9PQR5 432 aa11.7□□□□□ -0.54
CHD3-206ENST00000452447 EEF1E1O43324 174 aaKnown RBP11.7□□□□□ -0.54
CHD3-206ENST00000452447 LINC00032P0C843 101 aa11.7□□□□□ -0.54
CHD3-206ENST00000452447 TMIGD3P0DMS9 266 aaPredicted RBP11.7□□□□□ -0.54
CHD3-206ENST00000452447 POU3F2P20265 443 aaPredicted RBP11.7□□□□□ -0.54
CHD3-206ENST00000452447 STARP49675 285 aa11.7□□□□□ -0.54
CHD3-206ENST00000452447 DSCR4P56555 118 aaPredicted RBP11.7□□□□□ -0.54
CHD3-206ENST00000452447 RPL38P63173 70 aaKnown RBP11.7□□□□□ -0.54
CHD3-206ENST00000452447 FBXL19-AS1Q494R0 122 aa11.7□□□□□ -0.54
CHD3-206ENST00000452447 GALNTL6Q49A17 601 aa11.7□□□□□ -0.54
CHD3-206ENST00000452447 ANKRD26P1Q6NSI1 321 aa11.7□□□□□ -0.54
CHD3-206ENST00000452447 POMZP3Q6PJE2 187 aa11.7□□□□□ -0.54
CHD3-206ENST00000452447 Q6ZSR9 355 aa11.7□□□□□ -0.54
CHD3-206ENST00000452447 ZNF551Q7Z340 670 aaPredicted RBP11.7□□□□□ -0.54
CHD3-206ENST00000452447 KIF18BQ86Y91 864 aa11.7□□□□□ -0.54
CHD3-206ENST00000452447 DDIASQ8IXT1 998 aa11.7□□□□□ -0.54
CHD3-206ENST00000452447 BANPQ8N9N5 519 aa11.7□□□□□ -0.54
CHD3-206ENST00000452447 C9orf106Q8NAJ2 232 aa11.7□□□□□ -0.54
CHD3-206ENST00000452447 ZFP28Q8NHY6 868 aa11.7□□□□□ -0.54
CHD3-206ENST00000452447 PPCDCQ96CD2 204 aa11.7□□□□□ -0.54
CHD3-206ENST00000452447 ZBED6CLQ96FA7 236 aaPredicted RBP11.7□□□□□ -0.54
CHD3-206ENST00000452447 FAM111AQ96PZ2 611 aa11.7□□□□□ -0.54
CHD3-206ENST00000452447 TM9SF2Q99805 663 aa11.7□□□□□ -0.54
CHD3-206ENST00000452447 CCT7Q99832 543 aa11.7□□□□□ -0.54
CHD3-206ENST00000452447 REEP4Q9H6H4 257 aa11.7□□□□□ -0.54
CHD3-206ENST00000452447 C3orf14Q9HBI5 128 aa11.7□□□□□ -0.54
CHD3-206ENST00000452447 EQTNQ9NQ60 294 aa11.7□□□□□ -0.54
CHD3-206ENST00000452447 MKS1Q9NXB0 559 aa11.7□□□□□ -0.54
CHD3-206ENST00000452447 DNAJB12Q9NXW2 375 aaKnown RBP11.7□□□□□ -0.54
CHD3-206ENST00000452447 CRIM1Q9NZV1 1036 aa11.7□□□□□ -0.54
CHD3-206ENST00000452447 SH3BP4Q9P0V3 963 aa11.7□□□□□ -0.54
CHD3-206ENST00000452447 TMED5Q9Y3A6 229 aa11.7□□□□□ -0.54
CHD3-206ENST00000452447 DNAJC15Q9Y5T4 150 aa11.7□□□□□ -0.54
CHD3-206ENST00000452447 ITPR3Q14573 2671 aa11.7□□□□□ -0.54
CHD3-206ENST00000452447 MTORP42345 2549 aa11.69□□□□□ -0.54
CHD3-206ENST00000452447 ZFHX3Q15911 3703 aa11.69□□□□□ -0.54
CHD3-206ENST00000452447 CLCA1A8K7I4 914 aa11.69□□□□□ -0.54
CHD3-206ENST00000452447 AKAP10O43572 662 aa11.69□□□□□ -0.54
CHD3-206ENST00000452447 ZIC3O60481 467 aa11.69□□□□□ -0.54
CHD3-206ENST00000452447 CTAG2O75638 210 aa11.69□□□□□ -0.54
CHD3-206ENST00000452447 KCNH1O95259 989 aa11.69□□□□□ -0.54
CHD3-206ENST00000452447 PSMG1O95456 288 aa11.69□□□□□ -0.54
CHD3-206ENST00000452447 IL18BPO95998 194 aa11.69□□□□□ -0.54
CHD3-206ENST00000452447 TUBBP07437 444 aa11.69□□□□□ -0.54
CHD3-206ENST00000452447 IFI6P09912 130 aa11.69□□□□□ -0.54
CHD3-206ENST00000452447 NUDT17P0C025 328 aa11.69□□□□□ -0.54
CHD3-206ENST00000452447 SDC1P18827 310 aa11.69□□□□□ -0.54
CHD3-206ENST00000452447 CHMP24386 653 aa11.69□□□□□ -0.54
CHD3-206ENST00000452447 ALDH3A1P30838 453 aa11.69□□□□□ -0.54
CHD3-206ENST00000452447 GABRA3P34903 492 aa11.69□□□□□ -0.54
CHD3-206ENST00000452447 GAS1P54826 345 aa11.69□□□□□ -0.54
CHD3-206ENST00000452447 MANFP55145 182 aaKnown RBP11.69□□□□□ -0.54
CHD3-206ENST00000452447 FLYWCH1Q4VC44 716 aa11.69□□□□□ -0.54
CHD3-206ENST00000452447 RFTN2Q52LD8 501 aaPredicted RBP11.69□□□□□ -0.54
CHD3-206ENST00000452447 KANK2Q63ZY3 851 aa11.69□□□□□ -0.54
CHD3-206ENST00000452447 RNF165Q6ZSG1 346 aa11.69□□□□□ -0.54
CHD3-206ENST00000452447 CHMP1BQ7LBR1 199 aa11.69□□□□□ -0.54
CHD3-206ENST00000452447 SZRD1Q7Z422 152 aa11.69□□□□□ -0.54
CHD3-206ENST00000452447 TRABD2AQ86V40 505 aa11.69□□□□□ -0.54
CHD3-206ENST00000452447 OR2T11Q8NH01 316 aa11.69□□□□□ -0.54
CHD3-206ENST00000452447 RNF138Q8WVD3 245 aa11.69□□□□□ -0.54
CHD3-206ENST00000452447 WNT2BQ93097 391 aa11.69□□□□□ -0.54
CHD3-206ENST00000452447 CIDECQ96AQ7 238 aaPredicted RBP11.69□□□□□ -0.54
CHD3-206ENST00000452447 ZFP3Q96NJ6 502 aa11.69□□□□□ -0.54
CHD3-206ENST00000452447 TSSK3Q96PN8 268 aa11.69□□□□□ -0.54
CHD3-206ENST00000452447 LMF2Q9BU23 707 aaKnown RBP11.69□□□□□ -0.54
CHD3-206ENST00000452447 POLDIP3Q9BY77 421 aaKnown RBP11.69□□□□□ -0.54
CHD3-206ENST00000452447 ACBD3Q9H3P7 528 aa11.69□□□□□ -0.54
CHD3-206ENST00000452447 DSN1Q9H410 356 aa11.69□□□□□ -0.54
CHD3-206ENST00000452447 TUBB1Q9H4B7 451 aa11.69□□□□□ -0.54
CHD3-206ENST00000452447 PTGES2Q9H7Z7 377 aa11.69□□□□□ -0.54
CHD3-206ENST00000452447 ABCG2Q9UNQ0 655 aa11.69□□□□□ -0.54
CHD3-206ENST00000452447 TRAF6Q9Y4K3 522 aa11.69□□□□□ -0.54
CHD3-206ENST00000452447 TUBAL3A6NHL2 446 aa11.68□□□□□ -0.54
CHD3-206ENST00000452447 LSM1O15116 133 aaKnown RBP11.68□□□□□ -0.54
CHD3-206ENST00000452447 FADS1O60427 444 aa11.68□□□□□ -0.54
CHD3-206ENST00000452447 NPHS1O60500 1241 aa11.68□□□□□ -0.54
CHD3-206ENST00000452447 SPAG7O75391 227 aa11.68□□□□□ -0.54
CHD3-206ENST00000452447 RCBTB2O95199 551 aa11.68□□□□□ -0.54
CHD3-206ENST00000452447 IL33O95760 270 aa11.68□□□□□ -0.54
CHD3-206ENST00000452447 CHRNGP07510 517 aa11.68□□□□□ -0.54
CHD3-206ENST00000452447 FGF4P08620 206 aa11.68□□□□□ -0.54
CHD3-206ENST00000452447 PRPS2P11908 318 aa11.68□□□□□ -0.54
CHD3-206ENST00000452447 ZNF708P17019 499 aa11.68□□□□□ -0.54
CHD3-206ENST00000452447 DDX5P17844 614 aaKnown RBP11.68□□□□□ -0.54
CHD3-206ENST00000452447 ASMTP46597 345 aa11.68□□□□□ -0.54
CHD3-206ENST00000452447 LHX2P50458 406 aa11.68□□□□□ -0.54
CHD3-206ENST00000452447 PRKAG1P54619 331 aa11.68□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms