RNA–Protein interactions for RNA: ENST00000452182.1

SCN9A-204, Transcript of sodium voltage-gated channel alpha subunit 9, humanhuman

TSL 1 (best)

Gene SCN9A, Length 1,618 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN9A-204ENST00000452182 TMEM125Q96AQ2 219 aa10.67□□□□□ -0.7
SCN9A-204ENST00000452182 SPACA9Q96E40 222 aaPredicted RBP10.67□□□□□ -0.7
SCN9A-204ENST00000452182 OMA1Q96E52 524 aa10.67□□□□□ -0.7
SCN9A-204ENST00000452182 OTUB1Q96FW1 271 aaPredicted RBP10.67□□□□□ -0.7
SCN9A-204ENST00000452182 SGCZQ96LD1 299 aa10.67□□□□□ -0.7
SCN9A-204ENST00000452182 USB1Q9BQ65 265 aaKnown RBP10.67□□□□□ -0.7
SCN9A-204ENST00000452182 G6PC3Q9BUM1 346 aa10.67□□□□□ -0.7
SCN9A-204ENST00000452182 SPATA9Q9BWV2 254 aa10.67□□□□□ -0.7
SCN9A-204ENST00000452182 TMEM38AQ9H6F2 299 aa10.67□□□□□ -0.7
SCN9A-204ENST00000452182 SPAG4Q9NPE6 437 aa10.67□□□□□ -0.7
SCN9A-204ENST00000452182 POLE3Q9NRF9 147 aa10.67□□□□□ -0.7
SCN9A-204ENST00000452182 KCNE3Q9Y6H6 103 aa10.67□□□□□ -0.7
SCN9A-204ENST00000452182 ATMQ13315 3056 aa10.66□□□□□ -0.7
SCN9A-204ENST00000452182 GXYLT2A0PJZ3 443 aa10.66□□□□□ -0.7
SCN9A-204ENST00000452182 ATP5HO75947 161 aa10.66□□□□□ -0.7
SCN9A-204ENST00000452182 OR6B1O95007 311 aa10.66□□□□□ -0.7
SCN9A-204ENST00000452182 WDPCPO95876 746 aa10.66□□□□□ -0.7
SCN9A-204ENST00000452182 KRT20P35900 424 aa10.66□□□□□ -0.7
SCN9A-204ENST00000452182 CASRP41180 1078 aa10.66□□□□□ -0.7
SCN9A-204ENST00000452182 GZMMP51124 257 aa10.66□□□□□ -0.7
SCN9A-204ENST00000452182 PSME3P61289 254 aa10.66□□□□□ -0.7
SCN9A-204ENST00000452182 TUBA3CQ13748 450 aa10.66□□□□□ -0.7
SCN9A-204ENST00000452182 GNA13Q14344 377 aa10.66□□□□□ -0.7
SCN9A-204ENST00000452182 COL28A1Q2UY09 1125 aa10.66□□□□□ -0.7
SCN9A-204ENST00000452182 RABL3Q5HYI8 236 aa10.66□□□□□ -0.7
SCN9A-204ENST00000452182 DCST2Q5T1A1 773 aa10.66□□□□□ -0.7
SCN9A-204ENST00000452182 TUBA3EQ6PEY2 450 aa10.66□□□□□ -0.7
SCN9A-204ENST00000452182 BRICD5Q6PL45 260 aa10.66□□□□□ -0.7
SCN9A-204ENST00000452182 CALHM3Q86XJ0 350 aa10.66□□□□□ -0.7
SCN9A-204ENST00000452182 SLC15A3Q8IY34 581 aa10.66□□□□□ -0.7
SCN9A-204ENST00000452182 C10orf111Q8N326 155 aa10.66□□□□□ -0.7
SCN9A-204ENST00000452182 GOLM1Q8NBJ4 401 aa10.66□□□□□ -0.7
SCN9A-204ENST00000452182 RBM15BQ8NDT2 890 aaKnown RBP10.66□□□□□ -0.7
SCN9A-204ENST00000452182 FBXO27Q8NI29 283 aa10.66□□□□□ -0.7
SCN9A-204ENST00000452182 PMM1Q92871 262 aa10.66□□□□□ -0.7
SCN9A-204ENST00000452182 RMND5BQ96G75 393 aaPredicted RBP10.66□□□□□ -0.7
SCN9A-204ENST00000452182 ABHD17AQ96GS6 310 aa10.66□□□□□ -0.7
SCN9A-204ENST00000452182 TRNT1Q96Q11 434 aaKnown RBP10.66□□□□□ -0.7
SCN9A-204ENST00000452182 SECISBP2Q96T21 854 aaKnown RBP10.66□□□□□ -0.7
SCN9A-204ENST00000452182 SDF2Q99470 211 aa10.66□□□□□ -0.7
SCN9A-204ENST00000452182 ECSITQ9BQ95 431 aa10.66□□□□□ -0.7
SCN9A-204ENST00000452182 UTP23Q9BRU9 249 aaKnown RBP10.66□□□□□ -0.7
SCN9A-204ENST00000452182 TRIM8Q9BZR9 551 aa10.66□□□□□ -0.7
SCN9A-204ENST00000452182 ZNF350Q9GZX5 532 aa10.66□□□□□ -0.7
SCN9A-204ENST00000452182 A4GALTQ9NPC4 353 aa10.66□□□□□ -0.7
SCN9A-204ENST00000452182 HPF1Q9NWY4 346 aa10.66□□□□□ -0.7
SCN9A-204ENST00000452182 P2RX2Q9UBL9 471 aa10.66□□□□□ -0.7
SCN9A-204ENST00000452182 ZNF451Q9Y4E5 1061 aa10.66□□□□□ -0.7
SCN9A-204ENST00000452182 PRAMEF27A3QJZ7 478 aa10.66□□□□□ -0.7
SCN9A-204ENST00000452182 OR5H15A6NDH6 313 aa10.66□□□□□ -0.7
SCN9A-204ENST00000452182 TMEM247A6NEH6 219 aa10.66□□□□□ -0.7
SCN9A-204ENST00000452182 DNAJA2O60884 412 aa10.66□□□□□ -0.7
SCN9A-204ENST00000452182 STX11O75558 287 aa10.66□□□□□ -0.7
SCN9A-204ENST00000452182 REM1O75628 298 aa10.66□□□□□ -0.7
SCN9A-204ENST00000452182 TFPTP0C1Z6 253 aa10.66□□□□□ -0.7
SCN9A-204ENST00000452182 ARAFP10398 606 aa10.66□□□□□ -0.7
SCN9A-204ENST00000452182 CD96P40200 585 aa10.66□□□□□ -0.7
SCN9A-204ENST00000452182 SLC7A2P52569 658 aa10.66□□□□□ -0.7
SCN9A-204ENST00000452182 MXRA7P84157 204 aa10.66□□□□□ -0.7
SCN9A-204ENST00000452182 SLC25A3Q00325 362 aa10.66□□□□□ -0.7
SCN9A-204ENST00000452182 RBBP4Q09028 425 aa10.66□□□□□ -0.7
SCN9A-204ENST00000452182 FUT5Q11128 374 aa10.66□□□□□ -0.7
SCN9A-204ENST00000452182 KCNAB2Q13303 367 aa10.66□□□□□ -0.7
SCN9A-204ENST00000452182 EFR3AQ14156 821 aa10.66□□□□□ -0.7
SCN9A-204ENST00000452182 MAPK11Q15759 364 aa10.66□□□□□ -0.7
SCN9A-204ENST00000452182 ADRM1Q16186 407 aa10.66□□□□□ -0.7
SCN9A-204ENST00000452182 ZNF630Q2M218 657 aaPredicted RBP10.66□□□□□ -0.7
SCN9A-204ENST00000452182 SPATS1Q496A3 300 aa10.66□□□□□ -0.7
SCN9A-204ENST00000452182 GCNT6Q5T4J0 391 aa10.66□□□□□ -0.7
SCN9A-204ENST00000452182 ZNF468Q5VIY5 522 aaPredicted RBP10.66□□□□□ -0.7
SCN9A-204ENST00000452182 PRAMEF8Q5VWM4 474 aa10.66□□□□□ -0.7
SCN9A-204ENST00000452182 PRAMEF7Q5VXH5 474 aa10.66□□□□□ -0.7
SCN9A-204ENST00000452182 TMEM81Q6P7N7 255 aa10.66□□□□□ -0.7
SCN9A-204ENST00000452182 C19orf48Q6RUI8 117 aa10.66□□□□□ -0.7
SCN9A-204ENST00000452182 NUP54Q7Z3B4 507 aa10.66□□□□□ -0.7
SCN9A-204ENST00000452182 C16orf62Q7Z3J2 963 aa10.66□□□□□ -0.7
SCN9A-204ENST00000452182 PRR22Q8IZ63 422 aa10.66□□□□□ -0.7
SCN9A-204ENST00000452182 OR10A6Q8NH74 314 aa10.66□□□□□ -0.7
SCN9A-204ENST00000452182 SLC38A5Q8WUX1 472 aa10.66□□□□□ -0.7
SCN9A-204ENST00000452182 OIT3Q8WWZ8 545 aa10.66□□□□□ -0.7
SCN9A-204ENST00000452182 ZNF583Q96ND8 569 aa10.66□□□□□ -0.7
SCN9A-204ENST00000452182 COL21A1Q96P44 957 aa10.66□□□□□ -0.7
SCN9A-204ENST00000452182 ARHGAP9Q9BRR9 750 aa10.66□□□□□ -0.7
SCN9A-204ENST00000452182 SAP130Q9H0E3 1048 aa10.66□□□□□ -0.7
SCN9A-204ENST00000452182 ZBTB20Q9HC78 741 aaPredicted RBP10.66□□□□□ -0.7
SCN9A-204ENST00000452182 CMTM6Q9NX76 183 aa10.66□□□□□ -0.7
SCN9A-204ENST00000452182 TAS2R1Q9NYW7 299 aa10.66□□□□□ -0.7
SCN9A-204ENST00000452182 CALML5Q9NZT1 146 aa10.66□□□□□ -0.7
SCN9A-204ENST00000452182 LRFN1Q9P244 771 aa10.66□□□□□ -0.7
SCN9A-204ENST00000452182 TMEM181Q9P2C4 612 aa10.66□□□□□ -0.7
SCN9A-204ENST00000452182 L3MBTL1Q9Y468 752 aa10.66□□□□□ -0.7
SCN9A-204ENST00000452182 ITPR1Q14643 2758 aa10.65□□□□□ -0.7
SCN9A-204ENST00000452182 USP24Q9UPU5 2620 aa10.65□□□□□ -0.7
SCN9A-204ENST00000452182 ERVH48-1M5A8F1 160 aa10.65□□□□□ -0.7
SCN9A-204ENST00000452182 NME4O00746 187 aa10.65□□□□□ -0.7
SCN9A-204ENST00000452182 TP53I11O14683 189 aa10.65□□□□□ -0.7
SCN9A-204ENST00000452182 NEURL1O76050 574 aa10.65□□□□□ -0.7
SCN9A-204ENST00000452182 IGKV1D-16P01601 117 aa10.65□□□□□ -0.7
SCN9A-204ENST00000452182 NGFRP08138 427 aa10.65□□□□□ -0.7
SCN9A-204ENST00000452182 IL12BP29460 328 aa10.65□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms