RNA–Protein interactions for RNA: ENST00000452047.1

CPSF4-208, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 3

Gene CPSF4, Length 687 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-208ENST00000452047 OR5M10Q6IEU7 315 aa11.32□□□□□ -0.6
CPSF4-208ENST00000452047 ANKRD26P1Q6NSI1 321 aa11.32□□□□□ -0.6
CPSF4-208ENST00000452047 ENPP6Q6UWR7 440 aa11.32□□□□□ -0.6
CPSF4-208ENST00000452047 ZNF551Q7Z340 670 aaPredicted RBP11.32□□□□□ -0.6
CPSF4-208ENST00000452047 TRIM42Q8IWZ5 723 aa11.32□□□□□ -0.6
CPSF4-208ENST00000452047 FADS6Q8N9I5 356 aa11.32□□□□□ -0.6
CPSF4-208ENST00000452047 C9orf106Q8NAJ2 232 aa11.32□□□□□ -0.6
CPSF4-208ENST00000452047 HOXB13Q92826 284 aaPredicted RBP11.32□□□□□ -0.6
CPSF4-208ENST00000452047 GFM2Q969S9 779 aaKnown RBP11.32□□□□□ -0.6
CPSF4-208ENST00000452047 CIDECQ96AQ7 238 aaPredicted RBP11.32□□□□□ -0.6
CPSF4-208ENST00000452047 TSSK3Q96PN8 268 aa11.32□□□□□ -0.6
CPSF4-208ENST00000452047 UCN2Q96RP3 112 aa11.32□□□□□ -0.6
CPSF4-208ENST00000452047 LMF2Q9BU23 707 aaKnown RBP11.32□□□□□ -0.6
CPSF4-208ENST00000452047 RTN4RQ9BZR6 473 aa11.32□□□□□ -0.6
CPSF4-208ENST00000452047 IQCGQ9H095 443 aaKnown RBP11.32□□□□□ -0.6
CPSF4-208ENST00000452047 FLRT3Q9NZU0 649 aa11.32□□□□□ -0.6
CPSF4-208ENST00000452047 CLCF1Q9UBD9 225 aa11.32□□□□□ -0.6
CPSF4-208ENST00000452047 CBLCQ9ULV8 474 aa11.32□□□□□ -0.6
CPSF4-208ENST00000452047 ABCG2Q9UNQ0 655 aa11.32□□□□□ -0.6
CPSF4-208ENST00000452047 FIS1Q9Y3D6 152 aa11.32□□□□□ -0.6
CPSF4-208ENST00000452047 VPS13CQ709C8 3753 aa11.31□□□□□ -0.6
CPSF4-208ENST00000452047 ZNF469Q96JG9 3925 aaPredicted RBP11.31□□□□□ -0.6
CPSF4-208ENST00000452047 PDPK1O15530 556 aa11.31□□□□□ -0.6
CPSF4-208ENST00000452047 IL33O95760 270 aa11.31□□□□□ -0.6
CPSF4-208ENST00000452047 LINC00032P0C843 101 aa11.31□□□□□ -0.6
CPSF4-208ENST00000452047 ZNF708P17019 499 aa11.31□□□□□ -0.6
CPSF4-208ENST00000452047 CHMP24386 653 aa11.31□□□□□ -0.6
CPSF4-208ENST00000452047 CTSSP25774 331 aa11.31□□□□□ -0.6
CPSF4-208ENST00000452047 DPP4P27487 766 aa11.31□□□□□ -0.6
CPSF4-208ENST00000452047 UQCRC1P31930 480 aa11.31□□□□□ -0.6
CPSF4-208ENST00000452047 ARRB2P32121 409 aa11.31□□□□□ -0.6
CPSF4-208ENST00000452047 MAP3K8P41279 467 aa11.31□□□□□ -0.6
CPSF4-208ENST00000452047 CLDN18P56856 261 aa11.31□□□□□ -0.6
CPSF4-208ENST00000452047 B3GALT5-AS1P59052 145 aa11.31□□□□□ -0.6
CPSF4-208ENST00000452047 HSPB3Q12988 150 aa11.31□□□□□ -0.6
CPSF4-208ENST00000452047 DECR1Q16698 335 aa11.31□□□□□ -0.6
CPSF4-208ENST00000452047 ARL13AQ5H913 290 aaPredicted RBP11.31□□□□□ -0.6
CPSF4-208ENST00000452047 AAGABQ6PD74 315 aa11.31□□□□□ -0.6
CPSF4-208ENST00000452047 TMEM200AQ86VY9 491 aa11.31□□□□□ -0.6
CPSF4-208ENST00000452047 OR2M3Q8NG83 312 aa11.31□□□□□ -0.6
CPSF4-208ENST00000452047 TWIST2Q8WVJ9 160 aa11.31□□□□□ -0.6
CPSF4-208ENST00000452047 RNASE6Q93091 150 aaKnown RBP11.31□□□□□ -0.6
CPSF4-208ENST00000452047 DTNBP1Q96EV8 351 aa11.31□□□□□ -0.6
CPSF4-208ENST00000452047 REEP4Q9H6H4 257 aa11.31□□□□□ -0.6
CPSF4-208ENST00000452047 Q9N2J8 555 aa11.31□□□□□ -0.6
CPSF4-208ENST00000452047 FAM120CQ9NX05 1096 aaKnown RBP11.31□□□□□ -0.6
CPSF4-208ENST00000452047 JKAMPQ9P055 326 aa11.31□□□□□ -0.6
CPSF4-208ENST00000452047 NTMQ9P121 344 aa11.31□□□□□ -0.6
CPSF4-208ENST00000452047 DKKL1Q9UK85 242 aa11.31□□□□□ -0.6
CPSF4-208ENST00000452047 TMED5Q9Y3A6 229 aa11.31□□□□□ -0.6
CPSF4-208ENST00000452047 AKAP6Q13023 2319 aa11.3□□□□□ -0.6
CPSF4-208ENST00000452047 GIMAP1-GIMAP5A0A087WTJ2 511 aa11.3□□□□□ -0.6
CPSF4-208ENST00000452047 FAM221AA4D161 298 aa11.3□□□□□ -0.6
CPSF4-208ENST00000452047 CLCA1A8K7I4 914 aa11.3□□□□□ -0.6
CPSF4-208ENST00000452047 H0Y3Z8 333 aa11.3□□□□□ -0.6
CPSF4-208ENST00000452047 PIP5K1BO14986 540 aa11.3□□□□□ -0.6
CPSF4-208ENST00000452047 AKAP10O43572 662 aa11.3□□□□□ -0.6
CPSF4-208ENST00000452047 SCO2O43819 266 aa11.3□□□□□ -0.6
CPSF4-208ENST00000452047 SPAG7O75391 227 aa11.3□□□□□ -0.6
CPSF4-208ENST00000452047 CTAG2O75638 210 aa11.3□□□□□ -0.6
CPSF4-208ENST00000452047 ZWINTO95229 277 aa11.3□□□□□ -0.6
CPSF4-208ENST00000452047 IL18BPO95998 194 aa11.3□□□□□ -0.6
CPSF4-208ENST00000452047 CHEK2O96017 543 aa11.3□□□□□ -0.6
CPSF4-208ENST00000452047 BCKDHAP12694 445 aa11.3□□□□□ -0.6
CPSF4-208ENST00000452047 CREB1P16220 341 aa11.3□□□□□ -0.6
CPSF4-208ENST00000452047 OPRM1P35372 400 aa11.3□□□□□ -0.6
CPSF4-208ENST00000452047 PEX19P40855 299 aa11.3□□□□□ -0.6
CPSF4-208ENST00000452047 KIR2DL3P43628 341 aa11.3□□□□□ -0.6
CPSF4-208ENST00000452047 STARP49675 285 aa11.3□□□□□ -0.6
CPSF4-208ENST00000452047 DSCR4P56555 118 aaPredicted RBP11.3□□□□□ -0.6
CPSF4-208ENST00000452047 SRYQ05066 204 aa11.3□□□□□ -0.6
CPSF4-208ENST00000452047 IFFO1Q0D2I5 559 aa11.3□□□□□ -0.6
CPSF4-208ENST00000452047 ZNHIT3Q15649 155 aaPredicted RBP11.3□□□□□ -0.6
CPSF4-208ENST00000452047 XKR7Q5GH72 579 aa11.3□□□□□ -0.6
CPSF4-208ENST00000452047 WDR93Q6P2C0 686 aa11.3□□□□□ -0.6
CPSF4-208ENST00000452047 EMBQ6PCB8 327 aa11.3□□□□□ -0.6
CPSF4-208ENST00000452047 PLXDC2Q6UX71 529 aa11.3□□□□□ -0.6
CPSF4-208ENST00000452047 ZCCHC23Q6ZST2 131 aa11.3□□□□□ -0.6
CPSF4-208ENST00000452047 HOMEZQ8IX15 550 aa11.3□□□□□ -0.6
CPSF4-208ENST00000452047 ZZZ3Q8IYH5 903 aa11.3□□□□□ -0.6
CPSF4-208ENST00000452047 OR4K17Q8NGC6 315 aa11.3□□□□□ -0.6
CPSF4-208ENST00000452047 CLHC1Q8NHS4 586 aa11.3□□□□□ -0.6
CPSF4-208ENST00000452047 TCP10LQ8TDR4 215 aa11.3□□□□□ -0.6
CPSF4-208ENST00000452047 CAVIN3Q969G5 261 aa11.3□□□□□ -0.6
CPSF4-208ENST00000452047 PPCDCQ96CD2 204 aa11.3□□□□□ -0.6
CPSF4-208ENST00000452047 GIMAP5Q96F15 307 aa11.3□□□□□ -0.6
CPSF4-208ENST00000452047 ZBED6CLQ96FA7 236 aaPredicted RBP11.3□□□□□ -0.6
CPSF4-208ENST00000452047 SFXN2Q96NB2 322 aa11.3□□□□□ -0.6
CPSF4-208ENST00000452047 ZFP3Q96NJ6 502 aa11.3□□□□□ -0.6
CPSF4-208ENST00000452047 ROPN1BQ9BZX4 212 aaPredicted RBP11.3□□□□□ -0.6
CPSF4-208ENST00000452047 ROPN1Q9HAT0 212 aaPredicted RBP11.3□□□□□ -0.6
CPSF4-208ENST00000452047 CRIM1Q9NZV1 1036 aa11.3□□□□□ -0.6
CPSF4-208ENST00000452047 PPP4R1LQ9P1A2 415 aa11.3□□□□□ -0.6
CPSF4-208ENST00000452047 BAIAP2L1Q9UHR4 511 aa11.3□□□□□ -0.6
CPSF4-208ENST00000452047 FOXD3Q9UJU5 478 aaPredicted RBP11.3□□□□□ -0.6
CPSF4-208ENST00000452047 ITGB1BP2Q9UKP3 347 aa11.3□□□□□ -0.6
CPSF4-208ENST00000452047 RPH3AQ9Y2J0 694 aaPredicted RBP11.3□□□□□ -0.6
CPSF4-208ENST00000452047 TRAF6Q9Y4K3 522 aa11.3□□□□□ -0.6
CPSF4-208ENST00000452047 ITPR3Q14573 2671 aa11.3□□□□□ -0.6
CPSF4-208ENST00000452047 GXYLT2A0PJZ3 443 aa11.29□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms