RNA–Protein interactions for RNA: ENST00000451823.2

HMGB3P22-202, Transcript of high mobility group box 3 pseudogene 22, humanhuman

BASIC

Gene HMGB3P22, Length 572 nt, Biotype transcribed processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P22-202ENST00000451823 MCUBQ9NWR8 336 aa3.89□□□□□ -1.79
HMGB3P22-202ENST00000451823 CLN6Q9NWW5 311 aa3.89□□□□□ -1.79
HMGB3P22-202ENST00000451823 TESQ9UGI8 421 aaKnown RBP3.89□□□□□ -1.79
HMGB3P22-202ENST00000451823 CLEC2DQ9UHP7 191 aa3.89□□□□□ -1.79
HMGB3P22-202ENST00000451823 TEKT2Q9UIF3 430 aa3.89□□□□□ -1.79
HMGB3P22-202ENST00000451823 KIF25Q9UIL4 384 aa3.89□□□□□ -1.79
HMGB3P22-202ENST00000451823 BTNL2Q9UIR0 455 aa3.89□□□□□ -1.79
HMGB3P22-202ENST00000451823 HACL1Q9UJ83 578 aa3.89□□□□□ -1.79
HMGB3P22-202ENST00000451823 SCML1Q9UN30 329 aa3.89□□□□□ -1.79
HMGB3P22-202ENST00000451823 DUSP12Q9UNI6 340 aa3.89□□□□□ -1.79
HMGB3P22-202ENST00000451823 SSR3Q9UNL2 185 aa3.89□□□□□ -1.79
HMGB3P22-202ENST00000451823 DIMT1Q9UNQ2 313 aaKnown RBP3.89□□□□□ -1.79
HMGB3P22-202ENST00000451823 CHST2Q9Y4C5 530 aa3.89□□□□□ -1.79
HMGB3P22-202ENST00000451823 PCDHB1Q9Y5F3 818 aa3.89□□□□□ -1.79
HMGB3P22-202ENST00000451823 SCN8AQ9UQD0 1980 aa3.89□□□□□ -1.79
HMGB3P22-202ENST00000451823 BRWD3Q6RI45 1802 aa3.88□□□□□ -1.79
HMGB3P22-202ENST00000451823 TRPM7Q96QT4 1865 aa3.88□□□□□ -1.79
HMGB3P22-202ENST00000451823 MEIKINA0A087WXM9 373 aa3.88□□□□□ -1.79
HMGB3P22-202ENST00000451823 TRAV19A0A0A6YYK7 116 aa3.88□□□□□ -1.79
HMGB3P22-202ENST00000451823 TRDV1A0A1B0GX56 115 aa3.88□□□□□ -1.79
HMGB3P22-202ENST00000451823 TMEM129A0AVI4 362 aa3.88□□□□□ -1.79
HMGB3P22-202ENST00000451823 OR6C65A6NJZ3 312 aa3.88□□□□□ -1.79
HMGB3P22-202ENST00000451823 OR5K4A6NMS3 321 aa3.88□□□□□ -1.79
HMGB3P22-202ENST00000451823 A8MXK9 166 aa3.88□□□□□ -1.79
HMGB3P22-202ENST00000451823 MAGEB17A8MXT2 336 aa3.88□□□□□ -1.79
HMGB3P22-202ENST00000451823 DIRC3C9JPN6 131 aa3.88□□□□□ -1.79
HMGB3P22-202ENST00000451823 ATP6V1G2-DDX39BF2Z307 99 aa3.88□□□□□ -1.79
HMGB3P22-202ENST00000451823 M0QZQ0 153 aa3.88□□□□□ -1.79
HMGB3P22-202ENST00000451823 M0R129 80 aa3.88□□□□□ -1.79
HMGB3P22-202ENST00000451823 GTPBP1O00178 669 aaKnown RBP3.88□□□□□ -1.79
HMGB3P22-202ENST00000451823 CACNB4O00305 520 aaPredicted RBP3.88□□□□□ -1.79
HMGB3P22-202ENST00000451823 WWP2O00308 870 aa3.88□□□□□ -1.79
HMGB3P22-202ENST00000451823 GAPDHSO14556 408 aaPredicted RBP3.88□□□□□ -1.79
HMGB3P22-202ENST00000451823 FPGTO14772 594 aa3.88□□□□□ -1.79
HMGB3P22-202ENST00000451823 CASC3O15234 703 aaKnown RBP3.88□□□□□ -1.79
HMGB3P22-202ENST00000451823 PRAMEF4O60810 478 aa3.88□□□□□ -1.79
HMGB3P22-202ENST00000451823 ENTPD6O75354 484 aa3.88□□□□□ -1.79
HMGB3P22-202ENST00000451823 CLDN9O95484 217 aa3.88□□□□□ -1.79
HMGB3P22-202ENST00000451823 ADAP00813 363 aa3.88□□□□□ -1.79
HMGB3P22-202ENST00000451823 PDYNP01213 254 aa3.88□□□□□ -1.79
HMGB3P22-202ENST00000451823 IFNA16P05015 189 aa3.88□□□□□ -1.79
HMGB3P22-202ENST00000451823 TSPAN19P0C672 248 aa3.88□□□□□ -1.79
HMGB3P22-202ENST00000451823 OR56A5P0C7T3 313 aa3.88□□□□□ -1.79
HMGB3P22-202ENST00000451823 HSMCR30P0CW71 290 aa3.88□□□□□ -1.79
HMGB3P22-202ENST00000451823 SULT1A3P0DMM9 295 aa3.88□□□□□ -1.79
HMGB3P22-202ENST00000451823 SULT1A4P0DMN0 295 aa3.88□□□□□ -1.79
HMGB3P22-202ENST00000451823 HKR1P10072 659 aa3.88□□□□□ -1.79
HMGB3P22-202ENST00000451823 PRKAR1AP10644 381 aa3.88□□□□□ -1.79
HMGB3P22-202ENST00000451823 IFI30P13284 250 aa3.88□□□□□ -1.79
HMGB3P22-202ENST00000451823 HLA-EP13747 358 aa3.88□□□□□ -1.79
HMGB3P22-202ENST00000451823 ATF6P18850 670 aa3.88□□□□□ -1.79
HMGB3P22-202ENST00000451823 POU3F2P20265 443 aaPredicted RBP3.88□□□□□ -1.79
HMGB3P22-202ENST00000451823 DDCP20711 480 aa3.88□□□□□ -1.79
HMGB3P22-202ENST00000451823 LPOP22079 712 aaPredicted RBP3.88□□□□□ -1.79
HMGB3P22-202ENST00000451823 GALP22466 123 aa3.88□□□□□ -1.79
HMGB3P22-202ENST00000451823 LHCGRP22888 699 aa3.88□□□□□ -1.79
HMGB3P22-202ENST00000451823 PCSK1P29120 753 aa3.88□□□□□ -1.79
HMGB3P22-202ENST00000451823 RPL9P32969 192 aaKnown RBP3.88□□□□□ -1.79
HMGB3P22-202ENST00000451823 SDC2P34741 201 aa3.88□□□□□ -1.79
HMGB3P22-202ENST00000451823 SOX3P41225 446 aa3.88□□□□□ -1.79
HMGB3P22-202ENST00000451823 BDKRB1P46663 353 aa3.88□□□□□ -1.79
HMGB3P22-202ENST00000451823 RGRP47804 291 aa3.88□□□□□ -1.79
HMGB3P22-202ENST00000451823 AVPR1BP47901 424 aa3.88□□□□□ -1.79
HMGB3P22-202ENST00000451823 SLC6A12P48065 614 aa3.88□□□□□ -1.79
HMGB3P22-202ENST00000451823 IDH2P48735 452 aaKnown RBP3.88□□□□□ -1.79
HMGB3P22-202ENST00000451823 HSPA7P48741 367 aa3.88□□□□□ -1.79
HMGB3P22-202ENST00000451823 MAP2K6P52564 334 aa3.88□□□□□ -1.79
HMGB3P22-202ENST00000451823 ZNF91Q05481 1191 aa3.88□□□□□ -1.79
HMGB3P22-202ENST00000451823 ITKQ08881 620 aa3.88□□□□□ -1.79
HMGB3P22-202ENST00000451823 ACSM1Q08AH1 577 aa3.88□□□□□ -1.79
HMGB3P22-202ENST00000451823 RBBP4Q09028 425 aa3.88□□□□□ -1.79
HMGB3P22-202ENST00000451823 SMARCB1Q12824 385 aa3.88□□□□□ -1.79
HMGB3P22-202ENST00000451823 COX10Q12887 443 aa3.88□□□□□ -1.79
HMGB3P22-202ENST00000451823 EXOSC2Q13868 293 aaKnown RBP3.88□□□□□ -1.79
HMGB3P22-202ENST00000451823 GPR176Q14439 515 aa3.88□□□□□ -1.79
HMGB3P22-202ENST00000451823 P2RY14Q15391 338 aa3.88□□□□□ -1.79
HMGB3P22-202ENST00000451823 SEC23BQ15437 767 aa3.88□□□□□ -1.79
HMGB3P22-202ENST00000451823 RGNQ15493 299 aa3.88□□□□□ -1.79
HMGB3P22-202ENST00000451823 MED22Q15528 200 aa3.88□□□□□ -1.79
HMGB3P22-202ENST00000451823 DUSP6Q16828 381 aa3.88□□□□□ -1.79
HMGB3P22-202ENST00000451823 WSCD2Q2TBF2 565 aa3.88□□□□□ -1.79
HMGB3P22-202ENST00000451823 LGALSLQ3ZCW2 172 aaPredicted RBP3.88□□□□□ -1.79
HMGB3P22-202ENST00000451823 MPPE1Q53F39 396 aa3.88□□□□□ -1.79
HMGB3P22-202ENST00000451823 IFI44LQ53G44 452 aa3.88□□□□□ -1.79
HMGB3P22-202ENST00000451823 ARHGAP15Q53QZ3 475 aa3.88□□□□□ -1.79
HMGB3P22-202ENST00000451823 SPIN4Q56A73 249 aa3.88□□□□□ -1.79
HMGB3P22-202ENST00000451823 PYDC2Q56P42 97 aa3.88□□□□□ -1.79
HMGB3P22-202ENST00000451823 ZRANB3Q5FWF4 1079 aa3.88□□□□□ -1.79
HMGB3P22-202ENST00000451823 GPRC6AQ5T6X5 926 aa3.88□□□□□ -1.79
HMGB3P22-202ENST00000451823 GARNL3Q5VVW2 1013 aa3.88□□□□□ -1.79
HMGB3P22-202ENST00000451823 HACD4Q5VWC8 232 aa3.88□□□□□ -1.79
HMGB3P22-202ENST00000451823 TYW3Q6IPR3 259 aaKnown RBP3.88□□□□□ -1.79
HMGB3P22-202ENST00000451823 NOXRED1Q6NXP6 359 aa3.88□□□□□ -1.79
HMGB3P22-202ENST00000451823 ANKRD54Q6NXT1 300 aa3.88□□□□□ -1.79
HMGB3P22-202ENST00000451823 FBXL22Q6P050 247 aa3.88□□□□□ -1.79
HMGB3P22-202ENST00000451823 CNIH2Q6PI25 160 aa3.88□□□□□ -1.79
HMGB3P22-202ENST00000451823 ARSKQ6UWY0 536 aa3.88□□□□□ -1.79
HMGB3P22-202ENST00000451823 CERS6Q6ZMG9 384 aa3.88□□□□□ -1.79
HMGB3P22-202ENST00000451823 FAM92BQ6ZTR7 304 aa3.88□□□□□ -1.79
HMGB3P22-202ENST00000451823 WDR53Q7Z5U6 358 aaPredicted RBP3.88□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms