RNA–Protein interactions for RNA: ENST00000449954.1

LINC01961-201, Transcript of long intergenic non-protein coding RNA 1961, humanhuman

TSL 5 BASIC

Gene LINC01961, Length 745 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01961-201ENST00000449954 KLF1Q13351 362 aaPredicted RBP6.93□□□□□ -1.3
LINC01961-201ENST00000449954 GANABQ14697 944 aaKnown RBP6.93□□□□□ -1.3
LINC01961-201ENST00000449954 MORF4L2Q15014 288 aa6.93□□□□□ -1.3
LINC01961-201ENST00000449954 TSC22D1Q15714 1073 aa6.93□□□□□ -1.3
LINC01961-201ENST00000449954 PPP4R4Q6NUP7 873 aa6.93□□□□□ -1.3
LINC01961-201ENST00000449954 P2RY8Q86VZ1 359 aa6.93□□□□□ -1.3
LINC01961-201ENST00000449954 TDRPQ86YL5 185 aa6.93□□□□□ -1.3
LINC01961-201ENST00000449954 C1QL4Q86Z23 238 aa6.93□□□□□ -1.3
LINC01961-201ENST00000449954 KRTAP19-1Q8IUB9 90 aa6.93□□□□□ -1.3
LINC01961-201ENST00000449954 OR4N5Q8IXE1 308 aa6.93□□□□□ -1.3
LINC01961-201ENST00000449954 MYO1HQ8N1T3 1032 aa6.93□□□□□ -1.3
LINC01961-201ENST00000449954 BPIFB2Q8N4F0 458 aa6.93□□□□□ -1.3
LINC01961-201ENST00000449954 SRFBP1Q8NEF9 429 aaKnown RBP6.93□□□□□ -1.3
LINC01961-201ENST00000449954 KRT35Q92764 455 aa6.93□□□□□ -1.3
LINC01961-201ENST00000449954 TANKQ92844 425 aa6.93□□□□□ -1.3
LINC01961-201ENST00000449954 UBE2FQ969M7 185 aa6.93□□□□□ -1.3
LINC01961-201ENST00000449954 ADIPOR1Q96A54 375 aa6.93□□□□□ -1.3
LINC01961-201ENST00000449954 FBXL8Q96CD0 374 aa6.93□□□□□ -1.3
LINC01961-201ENST00000449954 TMCO6Q96DC7 493 aa6.93□□□□□ -1.3
LINC01961-201ENST00000449954 VPS39Q96JC1 886 aa6.93□□□□□ -1.3
LINC01961-201ENST00000449954 SNX18Q96RF0 628 aa6.93□□□□□ -1.3
LINC01961-201ENST00000449954 NODALQ96S42 347 aa6.93□□□□□ -1.3
LINC01961-201ENST00000449954 CCT8L2Q96SF2 557 aa6.93□□□□□ -1.3
LINC01961-201ENST00000449954 SLC6A7Q99884 636 aa6.93□□□□□ -1.3
LINC01961-201ENST00000449954 FAM118BQ9BPY3 351 aa6.93□□□□□ -1.3
LINC01961-201ENST00000449954 MAPKAP1Q9BPZ7 522 aa6.93□□□□□ -1.3
LINC01961-201ENST00000449954 INPP5KQ9BT40 448 aa6.93□□□□□ -1.3
LINC01961-201ENST00000449954 PITHD1Q9GZP4 211 aaPredicted RBP6.93□□□□□ -1.3
LINC01961-201ENST00000449954 WNT10AQ9GZT5 417 aa6.93□□□□□ -1.3
LINC01961-201ENST00000449954 IL22Q9GZX6 179 aa6.93□□□□□ -1.3
LINC01961-201ENST00000449954 NUP62CLQ9H1M0 184 aa6.93□□□□□ -1.3
LINC01961-201ENST00000449954 RPF2Q9H7B2 306 aaKnown RBP6.93□□□□□ -1.3
LINC01961-201ENST00000449954 FOLH1BQ9HBA9 442 aa6.93□□□□□ -1.3
LINC01961-201ENST00000449954 MBNL3Q9NUK0 354 aaKnown RBP6.93□□□□□ -1.3
LINC01961-201ENST00000449954 HIF1ANQ9NWT6 349 aa6.93□□□□□ -1.3
LINC01961-201ENST00000449954 KLHL21Q9UJP4 597 aa6.93□□□□□ -1.3
LINC01961-201ENST00000449954 PCDHB14Q9Y5E9 798 aa6.93□□□□□ -1.3
LINC01961-201ENST00000449954 COMMD10Q9Y6G5 202 aa6.93□□□□□ -1.3
LINC01961-201ENST00000449954 NPIPA5A0A0B4J1W7 369 aa6.92□□□□□ -1.3
LINC01961-201ENST00000449954 NPIPA7E9PJI5 369 aa6.92□□□□□ -1.3
LINC01961-201ENST00000449954 H3BML4 177 aa6.92□□□□□ -1.3
LINC01961-201ENST00000449954 TIMM23O14925 209 aa6.92□□□□□ -1.3
LINC01961-201ENST00000449954 ACOX3O15254 700 aa6.92□□□□□ -1.3
LINC01961-201ENST00000449954 SLITRK5O94991 958 aa6.92□□□□□ -1.3
LINC01961-201ENST00000449954 SCELO95171 688 aa6.92□□□□□ -1.3
LINC01961-201ENST00000449954 RNASE1P07998 156 aaKnown RBP6.92□□□□□ -1.3
LINC01961-201ENST00000449954 NPIPA8P0DM63 369 aa6.92□□□□□ -1.3
LINC01961-201ENST00000449954 TCEA1P23193 301 aaKnown RBP6.92□□□□□ -1.3
LINC01961-201ENST00000449954 CNTFP26441 200 aa6.92□□□□□ -1.3
LINC01961-201ENST00000449954 FDFT1P37268 417 aa6.92□□□□□ -1.3
LINC01961-201ENST00000449954 GRIA1P42261 906 aa6.92□□□□□ -1.3
LINC01961-201ENST00000449954 SLC6A8P48029 635 aa6.92□□□□□ -1.3
LINC01961-201ENST00000449954 NPY2RP49146 381 aa6.92□□□□□ -1.3
LINC01961-201ENST00000449954 CLDN20P56880 219 aa6.92□□□□□ -1.3
LINC01961-201ENST00000449954 SNRPD2P62316 118 aaKnown RBP6.92□□□□□ -1.3
LINC01961-201ENST00000449954 RPS26P62854 115 aaKnown RBP6.92□□□□□ -1.3
LINC01961-201ENST00000449954 PHC1P78364 1004 aa6.92□□□□□ -1.3
LINC01961-201ENST00000449954 PLCXD2Q0VAA5 305 aa6.92□□□□□ -1.3
LINC01961-201ENST00000449954 IKZF1Q13422 519 aa6.92□□□□□ -1.3
LINC01961-201ENST00000449954 STK11Q15831 433 aa6.92□□□□□ -1.3
LINC01961-201ENST00000449954 CPEB4Q17RY0 729 aaKnown RBP eCLIP6.92□□□□□ -1.3
LINC01961-201ENST00000449954 TSNAXIP1Q2TAA8 658 aa6.92□□□□□ -1.3
LINC01961-201ENST00000449954 TIMM23BQ5SRD1 257 aa6.92□□□□□ -1.3
LINC01961-201ENST00000449954 GTF2IRD2BQ6EKJ0 949 aa6.92□□□□□ -1.3
LINC01961-201ENST00000449954 KLHL17Q6TDP4 642 aa6.92□□□□□ -1.3
LINC01961-201ENST00000449954 TFAP2EQ6VUC0 442 aa6.92□□□□□ -1.3
LINC01961-201ENST00000449954 B3GLCTQ6Y288 498 aa6.92□□□□□ -1.3
LINC01961-201ENST00000449954 BHLHA15Q7RTS1 189 aaPredicted RBP6.92□□□□□ -1.3
LINC01961-201ENST00000449954 GTF2IRD2Q86UP8 949 aa6.92□□□□□ -1.3
LINC01961-201ENST00000449954 KRT78Q8N1N4 520 aa6.92□□□□□ -1.3
LINC01961-201ENST00000449954 TRIM58Q8NG06 486 aa6.92□□□□□ -1.3
LINC01961-201ENST00000449954 OR4K17Q8NGC6 315 aa6.92□□□□□ -1.3
LINC01961-201ENST00000449954 OMA1Q96E52 524 aa6.92□□□□□ -1.3
LINC01961-201ENST00000449954 GPR21Q99679 349 aa6.92□□□□□ -1.3
LINC01961-201ENST00000449954 TBCDQ9BTW9 1192 aa6.92□□□□□ -1.3
LINC01961-201ENST00000449954 RSPO3Q9BXY4 272 aaPredicted RBP6.92□□□□□ -1.3
LINC01961-201ENST00000449954 TRIM54Q9BYV2 358 aa6.92□□□□□ -1.3
LINC01961-201ENST00000449954 DDX47Q9H0S4 455 aaKnown RBP6.92□□□□□ -1.3
LINC01961-201ENST00000449954 HSD3B7Q9H2F3 369 aa6.92□□□□□ -1.3
LINC01961-201ENST00000449954 MYNNQ9NPC7 610 aa6.92□□□□□ -1.3
LINC01961-201ENST00000449954 PRDM7Q9NQW5 492 aa6.92□□□□□ -1.3
LINC01961-201ENST00000449954 ACSS1Q9NUB1 689 aaPredicted RBP6.92□□□□□ -1.3
LINC01961-201ENST00000449954 NPAP1Q9NZP6 1156 aa6.92□□□□□ -1.3
LINC01961-201ENST00000449954 ASIC3Q9UHC3 531 aa6.92□□□□□ -1.3
LINC01961-201ENST00000449954 CORO1CQ9ULV4 474 aaPredicted RBP6.92□□□□□ -1.3
LINC01961-201ENST00000449954 ZNF337Q9Y3M9 751 aa6.92□□□□□ -1.3
LINC01961-201ENST00000449954 AP4B1Q9Y6B7 739 aa6.92□□□□□ -1.3
LINC01961-201ENST00000449954 ARFGEF3Q5TH69 2177 aa6.91□□□□□ -1.3
LINC01961-201ENST00000449954 GOLGA8KD6RF30 607 aa6.91□□□□□ -1.3
LINC01961-201ENST00000449954 GOLGA8TH3BQL2 631 aa6.91□□□□□ -1.3
LINC01961-201ENST00000449954 AP3B1O00203 1094 aa6.91□□□□□ -1.3
LINC01961-201ENST00000449954 UGT2B11O75310 529 aa6.91□□□□□ -1.3
LINC01961-201ENST00000449954 H2AFYO75367 372 aaKnown RBP6.91□□□□□ -1.3
LINC01961-201ENST00000449954 TJP3O95049 919 aa6.91□□□□□ -1.3
LINC01961-201ENST00000449954 SYNGR4O95473 234 aa6.91□□□□□ -1.3
LINC01961-201ENST00000449954 STAMBPO95630 424 aa6.91□□□□□ -1.3
LINC01961-201ENST00000449954 PNPP00491 289 aa6.91□□□□□ -1.3
LINC01961-201ENST00000449954 MSMBP08118 114 aa6.91□□□□□ -1.3
LINC01961-201ENST00000449954 NUDT17P0C025 328 aa6.91□□□□□ -1.3
LINC01961-201ENST00000449954 DDX5P17844 614 aaKnown RBP6.91□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms