RNA–Protein interactions for RNA: ENST00000449049.7

SHMT2-203, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2 BASIC

Gene SHMT2, Length 2,121 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-203ENST00000449049 HNRNPCL4P0DMR1 293 aa12.97□□□□□ -0.33
SHMT2-203ENST00000449049 RRADP55042 308 aa12.97□□□□□ -0.33
SHMT2-203ENST00000449049 HPCAP84074 193 aa12.97□□□□□ -0.33
SHMT2-203ENST00000449049 DECR1Q16698 335 aa12.97□□□□□ -0.33
SHMT2-203ENST00000449049 CPEB4Q17RY0 729 aaKnown RBP eCLIP12.97□□□□□ -0.33
SHMT2-203ENST00000449049 RPS26P11Q5JNZ5 115 aaPredicted RBP12.97□□□□□ -0.33
SHMT2-203ENST00000449049 TYW3Q6IPR3 259 aaKnown RBP12.97□□□□□ -0.33
SHMT2-203ENST00000449049 FIGNL1Q6PIW4 674 aa12.97□□□□□ -0.33
SHMT2-203ENST00000449049 FRRS1Q6ZNA5 592 aa12.97□□□□□ -0.33
SHMT2-203ENST00000449049 C16orf47Q6ZP98 133 aaPredicted RBP12.97□□□□□ -0.33
SHMT2-203ENST00000449049 OLIG3Q7RTU3 272 aa12.97□□□□□ -0.33
SHMT2-203ENST00000449049 DHFR2Q86XF0 187 aa12.97□□□□□ -0.33
SHMT2-203ENST00000449049 SPACA3Q8IXA5 215 aa12.97□□□□□ -0.33
SHMT2-203ENST00000449049 SLC34A3Q8N130 599 aa12.97□□□□□ -0.33
SHMT2-203ENST00000449049 OR52E4Q8NGH9 312 aa12.97□□□□□ -0.33
SHMT2-203ENST00000449049 FIG4Q92562 907 aa12.97□□□□□ -0.33
SHMT2-203ENST00000449049 G6PC3Q9BUM1 346 aa12.97□□□□□ -0.33
SHMT2-203ENST00000449049 RYDENQ9NUL5 291 aaKnown RBP12.97□□□□□ -0.33
SHMT2-203ENST00000449049 FBXO34Q9NWN3 711 aa12.97□□□□□ -0.33
SHMT2-203ENST00000449049 POLHQ9Y253 713 aa12.97□□□□□ -0.33
SHMT2-203ENST00000449049 WWP2O00308 870 aa12.97□□□□□ -0.33
SHMT2-203ENST00000449049 FCMRO60667 390 aa12.97□□□□□ -0.33
SHMT2-203ENST00000449049 IL33O95760 270 aa12.97□□□□□ -0.33
SHMT2-203ENST00000449049 ATP6V1B2P21281 511 aa12.97□□□□□ -0.33
SHMT2-203ENST00000449049 ABCD3P28288 659 aa12.97□□□□□ -0.33
SHMT2-203ENST00000449049 KDELR2P33947 212 aa12.97□□□□□ -0.33
SHMT2-203ENST00000449049 POLE2P56282 527 aa12.97□□□□□ -0.33
SHMT2-203ENST00000449049 NRG3P56975 720 aa12.97□□□□□ -0.33
SHMT2-203ENST00000449049 SOX8P57073 446 aa12.97□□□□□ -0.33
SHMT2-203ENST00000449049 CRB2Q5IJ48 1285 aa12.97□□□□□ -0.33
SHMT2-203ENST00000449049 ERMP1Q7Z2K6 904 aa12.97□□□□□ -0.33
SHMT2-203ENST00000449049 TAGAPQ8N103 731 aa12.97□□□□□ -0.33
SHMT2-203ENST00000449049 SLC5A8Q8N695 610 aa12.97□□□□□ -0.33
SHMT2-203ENST00000449049 SLC15A4Q8N697 577 aa12.97□□□□□ -0.33
SHMT2-203ENST00000449049 CLEC1AQ8NC01 280 aa12.97□□□□□ -0.33
SHMT2-203ENST00000449049 PSMF1Q92530 271 aa12.97□□□□□ -0.33
SHMT2-203ENST00000449049 TMBIM1Q969X1 311 aa12.97□□□□□ -0.33
SHMT2-203ENST00000449049 THOC3Q96J01 351 aaKnown RBP12.97□□□□□ -0.33
SHMT2-203ENST00000449049 MRTO4Q9UKD2 239 aaKnown RBP12.97□□□□□ -0.33
SHMT2-203ENST00000449049 WDR45Q9Y484 360 aa12.97□□□□□ -0.33
SHMT2-203ENST00000449049 ARGFXA6NJG6 315 aa12.96□□□□□ -0.33
SHMT2-203ENST00000449049 KIAA0513O60268 411 aa12.96□□□□□ -0.33
SHMT2-203ENST00000449049 ZNF354AO60765 605 aaPredicted RBP12.96□□□□□ -0.33
SHMT2-203ENST00000449049 GMNNO75496 209 aa12.96□□□□□ -0.33
SHMT2-203ENST00000449049 OR2J2O76002 312 aa12.96□□□□□ -0.33
SHMT2-203ENST00000449049 ETS2P15036 469 aa12.96□□□□□ -0.33
SHMT2-203ENST00000449049 AQP1P29972 269 aa12.96□□□□□ -0.33
SHMT2-203ENST00000449049 CRYBA2P53672 197 aa12.96□□□□□ -0.33
SHMT2-203ENST00000449049 MLF1P58340 268 aa12.96□□□□□ -0.33
SHMT2-203ENST00000449049 CHRNEQ04844 493 aa12.96□□□□□ -0.33
SHMT2-203ENST00000449049 PLCXD2Q0VAA5 305 aa12.96□□□□□ -0.33
SHMT2-203ENST00000449049 FLOT2Q14254 428 aa12.96□□□□□ -0.33
SHMT2-203ENST00000449049 C1orf146Q5VVC0 180 aa12.96□□□□□ -0.33
SHMT2-203ENST00000449049 LYPD8Q6UX82 237 aa12.96□□□□□ -0.33
SHMT2-203ENST00000449049 ZAR1Q86SH2 424 aa12.96□□□□□ -0.33
SHMT2-203ENST00000449049 PATL1Q86TB9 770 aaKnown RBP12.96□□□□□ -0.33
SHMT2-203ENST00000449049 RPS19BP1Q86WX3 136 aaKnown RBP12.96□□□□□ -0.33
SHMT2-203ENST00000449049 SLC22A8Q8TCC7 542 aa12.96□□□□□ -0.33
SHMT2-203ENST00000449049 BRIX1Q8TDN6 353 aaKnown RBP12.96□□□□□ -0.33
SHMT2-203ENST00000449049 WDR60Q8WVS4 1066 aa12.96□□□□□ -0.33
SHMT2-203ENST00000449049 DIO2Q92813 273 aa12.96□□□□□ -0.33
SHMT2-203ENST00000449049 PMM1Q92871 262 aa12.96□□□□□ -0.33
SHMT2-203ENST00000449049 OMA1Q96E52 524 aa12.96□□□□□ -0.33
SHMT2-203ENST00000449049 LHPPQ9H008 270 aa12.96□□□□□ -0.33
SHMT2-203ENST00000449049 GPC6Q9Y625 555 aaPredicted RBP12.96□□□□□ -0.33
SHMT2-203ENST00000449049 RRP8O43159 456 aaKnown RBP12.95□□□□□ -0.34
SHMT2-203ENST00000449049 TSPAN2O60636 221 aa12.95□□□□□ -0.34
SHMT2-203ENST00000449049 PDE9AO76083 593 aa12.95□□□□□ -0.34
SHMT2-203ENST00000449049 STAMBPO95630 424 aa12.95□□□□□ -0.34
SHMT2-203ENST00000449049 NAGAP17050 411 aa12.95□□□□□ -0.34
SHMT2-203ENST00000449049 LCN1P31025 176 aa12.95□□□□□ -0.34
SHMT2-203ENST00000449049 PSMD4P55036 377 aaKnown RBP12.95□□□□□ -0.34
SHMT2-203ENST00000449049 MTX3Q5HYI7 312 aa12.95□□□□□ -0.34
SHMT2-203ENST00000449049 GALNT10Q86SR1 603 aa12.95□□□□□ -0.34
SHMT2-203ENST00000449049 PRR22Q8IZ63 422 aa12.95□□□□□ -0.34
SHMT2-203ENST00000449049 ZNF619Q8N2I2 560 aa12.95□□□□□ -0.34
SHMT2-203ENST00000449049 FAM162AQ96A26 154 aa12.95□□□□□ -0.34
SHMT2-203ENST00000449049 NSMCE2Q96MF7 247 aa12.95□□□□□ -0.34
SHMT2-203ENST00000449049 RASL10BQ96S79 203 aa12.95□□□□□ -0.34
SHMT2-203ENST00000449049 CDCP1Q9H5V8 836 aa12.95□□□□□ -0.34
SHMT2-203ENST00000449049 MKLN1Q9UL63 735 aa12.95□□□□□ -0.34
SHMT2-203ENST00000449049 YARS2Q9Y2Z4 477 aaKnown RBP12.95□□□□□ -0.34
SHMT2-203ENST00000449049 PCDHGA10Q9Y5H3 936 aa12.95□□□□□ -0.34
SHMT2-203ENST00000449049 NPFFR2Q9Y5X5 522 aa12.95□□□□□ -0.34
SHMT2-203ENST00000449049 AHCTF1Q8WYP5 2266 aa12.95□□□□□ -0.34
SHMT2-203ENST00000449049 A8MUI8 341 aa12.95□□□□□ -0.34
SHMT2-203ENST00000449049 MAN1A2O60476 641 aa12.95□□□□□ -0.34
SHMT2-203ENST00000449049 ITGA10O75578 1167 aa12.95□□□□□ -0.34
SHMT2-203ENST00000449049 ATP6V1C1P21283 382 aa12.95□□□□□ -0.34
SHMT2-203ENST00000449049 RPS4Y1P22090 263 aaKnown RBP12.95□□□□□ -0.34
SHMT2-203ENST00000449049 PNLIPRP2P54317 469 aa12.95□□□□□ -0.34
SHMT2-203ENST00000449049 CYP2R1Q6VVX0 501 aa12.95□□□□□ -0.34
SHMT2-203ENST00000449049 CCDC81Q6ZN84 652 aa12.95□□□□□ -0.34
SHMT2-203ENST00000449049 KRT73Q86Y46 540 aa12.95□□□□□ -0.34
SHMT2-203ENST00000449049 SPPL2CQ8IUH8 684 aa12.95□□□□□ -0.34
SHMT2-203ENST00000449049 BHLHE22Q8NFJ8 381 aaPredicted RBP12.95□□□□□ -0.34
SHMT2-203ENST00000449049 TAMM41Q96BW9 452 aa12.95□□□□□ -0.34
SHMT2-203ENST00000449049 EFHD2Q96C19 240 aaPredicted RBP12.95□□□□□ -0.34
SHMT2-203ENST00000449049 ZNF607Q96SK3 696 aa12.95□□□□□ -0.34
SHMT2-203ENST00000449049 TRIM15Q9C019 465 aa12.95□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms