RNA–Protein interactions for RNA: ENST00000448905.6

HMGB3-204, Transcript of high mobility group box 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene HMGB3, Length 812 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3-204ENST00000448905 CD8BP10966 210 aa12□□□□□ -0.49
HMGB3-204ENST00000448905 FCGR2AP12318 317 aa12□□□□□ -0.49
HMGB3-204ENST00000448905 PPP3CBP16298 524 aa12□□□□□ -0.49
HMGB3-204ENST00000448905 IMPDH1P20839 514 aa12□□□□□ -0.49
HMGB3-204ENST00000448905 TBXA2RP21731 343 aa12□□□□□ -0.49
HMGB3-204ENST00000448905 EVI2BP34910 448 aa12□□□□□ -0.49
HMGB3-204ENST00000448905 KIR2DL2P43627 348 aaPredicted RBP12□□□□□ -0.49
HMGB3-204ENST00000448905 PPP2R2BQ00005 443 aa12□□□□□ -0.49
HMGB3-204ENST00000448905 DUSP2Q05923 314 aa12□□□□□ -0.49
HMGB3-204ENST00000448905 SPDYAQ5MJ70 313 aa12□□□□□ -0.49
HMGB3-204ENST00000448905 SH2D4BQ5SQS7 431 aa12□□□□□ -0.49
HMGB3-204ENST00000448905 RPS27LQ71UM5 84 aaKnown RBP12□□□□□ -0.49
HMGB3-204ENST00000448905 ZNF572Q7Z3I7 529 aaPredicted RBP12□□□□□ -0.49
HMGB3-204ENST00000448905 YTHDF3Q7Z739 585 aaKnown RBP12□□□□□ -0.49
HMGB3-204ENST00000448905 LCA5Q86VQ0 697 aa12□□□□□ -0.49
HMGB3-204ENST00000448905 SLC22A9Q8IVM8 553 aa12□□□□□ -0.49
HMGB3-204ENST00000448905 ZNF610Q8N9Z0 462 aa12□□□□□ -0.49
HMGB3-204ENST00000448905 C16orf78Q8WTQ4 265 aa12□□□□□ -0.49
HMGB3-204ENST00000448905 DUSP19Q8WTR2 217 aa12□□□□□ -0.49
HMGB3-204ENST00000448905 HBEGFQ99075 208 aa12□□□□□ -0.49
HMGB3-204ENST00000448905 PAFAH2Q99487 392 aa12□□□□□ -0.49
HMGB3-204ENST00000448905 PINK1Q9BXM7 581 aa12□□□□□ -0.49
HMGB3-204ENST00000448905 IQCGQ9H095 443 aaKnown RBP12□□□□□ -0.49
HMGB3-204ENST00000448905 ANKRA2Q9H9E1 313 aa12□□□□□ -0.49
HMGB3-204ENST00000448905 C3orf14Q9HBI5 128 aa12□□□□□ -0.49
HMGB3-204ENST00000448905 Q9N2J8 555 aa12□□□□□ -0.49
HMGB3-204ENST00000448905 GRID1Q9ULK0 1009 aa12□□□□□ -0.49
HMGB3-204ENST00000448905 PROCRQ9UNN8 238 aa12□□□□□ -0.49
HMGB3-204ENST00000448905 ABCG2Q9UNQ0 655 aa12□□□□□ -0.49
HMGB3-204ENST00000448905 WBP11Q9Y2W2 641 aaKnown RBP12□□□□□ -0.49
HMGB3-204ENST00000448905 ZNF337Q9Y3M9 751 aa12□□□□□ -0.49
HMGB3-204ENST00000448905 ACANP16112 2415 aa11.99□□□□□ -0.49
HMGB3-204ENST00000448905 ABCA2Q9BZC7 2435 aa11.99□□□□□ -0.49
HMGB3-204ENST00000448905 A0A087WUV0 522 aaPredicted RBP11.99□□□□□ -0.49
HMGB3-204ENST00000448905 A0A087WV62 115 aa11.99□□□□□ -0.49
HMGB3-204ENST00000448905 A0A1W2PPR1 153 aa11.99□□□□□ -0.49
HMGB3-204ENST00000448905 TRIM49D1C9J1S8 452 aa11.99□□□□□ -0.49
HMGB3-204ENST00000448905 H7C1Q1 480 aa11.99□□□□□ -0.49
HMGB3-204ENST00000448905 SCO2O43819 266 aa11.99□□□□□ -0.49
HMGB3-204ENST00000448905 PLGP00747 810 aaPredicted RBP11.99□□□□□ -0.49
HMGB3-204ENST00000448905 GAS1P54826 345 aa11.99□□□□□ -0.49
HMGB3-204ENST00000448905 PKNOX1P55347 436 aa11.99□□□□□ -0.49
HMGB3-204ENST00000448905 SIRPAP78324 504 aa11.99□□□□□ -0.49
HMGB3-204ENST00000448905 BTKQ06187 659 aa11.99□□□□□ -0.49
HMGB3-204ENST00000448905 C17orf67Q0P5P2 114 aa11.99□□□□□ -0.49
HMGB3-204ENST00000448905 C2orf80Q0P641 193 aa11.99□□□□□ -0.49
HMGB3-204ENST00000448905 ZNF155Q12901 538 aaPredicted RBP11.99□□□□□ -0.49
HMGB3-204ENST00000448905 ZNF678Q5SXM1 525 aa11.99□□□□□ -0.49
HMGB3-204ENST00000448905 GALNT18Q6P9A2 607 aa11.99□□□□□ -0.49
HMGB3-204ENST00000448905 VWA1Q6PCB0 445 aa11.99□□□□□ -0.49
HMGB3-204ENST00000448905 ZNF474Q6S9Z5 364 aaPredicted RBP11.99□□□□□ -0.49
HMGB3-204ENST00000448905 PLEKHM3Q6ZWE6 761 aa11.99□□□□□ -0.49
HMGB3-204ENST00000448905 FAM214BQ7L5A3 538 aa11.99□□□□□ -0.49
HMGB3-204ENST00000448905 CNPY4Q8N129 248 aa11.99□□□□□ -0.49
HMGB3-204ENST00000448905 FADS6Q8N9I5 356 aa11.99□□□□□ -0.49
HMGB3-204ENST00000448905 OR2M3Q8NG83 312 aa11.99□□□□□ -0.49
HMGB3-204ENST00000448905 OR4N2Q8NGD1 307 aa11.99□□□□□ -0.49
HMGB3-204ENST00000448905 IFT81Q8WYA0 676 aa11.99□□□□□ -0.49
HMGB3-204ENST00000448905 CAVIN3Q969G5 261 aa11.99□□□□□ -0.49
HMGB3-204ENST00000448905 ARSGQ96EG1 525 aa11.99□□□□□ -0.49
HMGB3-204ENST00000448905 Q96MF0 132 aa11.99□□□□□ -0.49
HMGB3-204ENST00000448905 ZNF382Q96SR6 550 aa11.99□□□□□ -0.49
HMGB3-204ENST00000448905 TBL1XR1Q9BZK7 514 aa11.99□□□□□ -0.49
HMGB3-204ENST00000448905 KLHL4Q9C0H6 718 aa11.99□□□□□ -0.49
HMGB3-204ENST00000448905 OPN3Q9H1Y3 402 aaPredicted RBP11.99□□□□□ -0.49
HMGB3-204ENST00000448905 RNF122Q9H9V4 155 aa11.99□□□□□ -0.49
HMGB3-204ENST00000448905 MIEF1Q9NQG6 463 aa11.99□□□□□ -0.49
HMGB3-204ENST00000448905 PAQR5Q9NXK6 330 aaPredicted RBP11.99□□□□□ -0.49
HMGB3-204ENST00000448905 MED11Q9P086 117 aa11.99□□□□□ -0.49
HMGB3-204ENST00000448905 DMGDHQ9UI17 866 aaKnown RBP11.99□□□□□ -0.49
HMGB3-204ENST00000448905 EMC9Q9Y3B6 208 aa11.99□□□□□ -0.49
HMGB3-204ENST00000448905 AP4B1Q9Y6B7 739 aa11.99□□□□□ -0.49
HMGB3-204ENST00000448905 FREM3P0C091 2139 aa11.99□□□□□ -0.49
HMGB3-204ENST00000448905 HRNRQ86YZ3 2850 aaPredicted RBP11.99□□□□□ -0.49
HMGB3-204ENST00000448905 DNHD1Q96M86 4753 aa11.98□□□□□ -0.49
HMGB3-204ENST00000448905 TTC36A6NLP5 189 aa11.98□□□□□ -0.49
HMGB3-204ENST00000448905 DEFB108AA8MXU0 73 aa11.98□□□□□ -0.49
HMGB3-204ENST00000448905 SMAD7O15105 426 aaKnown RBP11.98□□□□□ -0.49
HMGB3-204ENST00000448905 SEC14L5O43304 696 aa11.98□□□□□ -0.49
HMGB3-204ENST00000448905 FADS1O60427 444 aa11.98□□□□□ -0.49
HMGB3-204ENST00000448905 ENO1P06733 434 aaKnown RBP11.98□□□□□ -0.49
HMGB3-204ENST00000448905 DDCP20711 480 aa11.98□□□□□ -0.49
HMGB3-204ENST00000448905 ATP5F1P24539 256 aaPredicted RBP11.98□□□□□ -0.49
HMGB3-204ENST00000448905 TIA1P31483 386 aaKnown RBP eCLIP11.98□□□□□ -0.49
HMGB3-204ENST00000448905 NCBP2P52298 156 aaKnown RBP eCLIP11.98□□□□□ -0.49
HMGB3-204ENST00000448905 CTBP2P56545 445 aa11.98□□□□□ -0.49
HMGB3-204ENST00000448905 CLDN15P56746 228 aa11.98□□□□□ -0.49
HMGB3-204ENST00000448905 B3GALT5-AS1P59052 145 aa11.98□□□□□ -0.49
HMGB3-204ENST00000448905 PSG6Q00889 435 aa11.98□□□□□ -0.49
HMGB3-204ENST00000448905 PON3Q15166 354 aa11.98□□□□□ -0.49
HMGB3-204ENST00000448905 UNC50Q53HI1 259 aa11.98□□□□□ -0.49
HMGB3-204ENST00000448905 GTF2IRD2BQ6EKJ0 949 aa11.98□□□□□ -0.49
HMGB3-204ENST00000448905 NPSR1Q6W5P4 371 aa11.98□□□□□ -0.49
HMGB3-204ENST00000448905 GTF2IRD2Q86UP8 949 aa11.98□□□□□ -0.49
HMGB3-204ENST00000448905 KRTAP1-3Q8IUG1 177 aa11.98□□□□□ -0.49
HMGB3-204ENST00000448905 TMEM151AQ8N4L1 468 aa11.98□□□□□ -0.49
HMGB3-204ENST00000448905 MMGT1Q8N4V1 131 aa11.98□□□□□ -0.49
HMGB3-204ENST00000448905 OR7G2Q8NG99 324 aa11.98□□□□□ -0.49
HMGB3-204ENST00000448905 RNF138Q8WVD3 245 aa11.98□□□□□ -0.49
HMGB3-204ENST00000448905 FIG4Q92562 907 aa11.98□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 144.2 ms