RNA–Protein interactions for RNA: ENST00000448192.1

DDX56-207, Transcript of DEAD-box helicase 56, humanhuman

TSL 2

Gene DDX56, Length 691 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-207ENST00000448192 SRD5A2P31213 254 aa16.08■□□□□ 0.16
DDX56-207ENST00000448192 EVI2BP34910 448 aa16.08■□□□□ 0.16
DDX56-207ENST00000448192 GAS1P54826 345 aa16.08■□□□□ 0.16
DDX56-207ENST00000448192 CES4AQ5XG92 561 aa16.08■□□□□ 0.16
DDX56-207ENST00000448192 RNF165Q6ZSG1 346 aa16.08■□□□□ 0.16
DDX56-207ENST00000448192 TMEM200AQ86VY9 491 aa16.08■□□□□ 0.16
DDX56-207ENST00000448192 OR4K17Q8NGC6 315 aa16.08■□□□□ 0.16
DDX56-207ENST00000448192 ZPLD1Q8TCW7 415 aa16.08■□□□□ 0.16
DDX56-207ENST00000448192 FCRL1Q96LA6 429 aa16.08■□□□□ 0.16
DDX56-207ENST00000448192 TUBA1CQ9BQE3 449 aa16.08■□□□□ 0.16
DDX56-207ENST00000448192 CALHM2Q9HA72 323 aa16.08■□□□□ 0.16
DDX56-207ENST00000448192 FLRT3Q9NZU0 649 aa16.08■□□□□ 0.16
DDX56-207ENST00000448192 PPP4R1LQ9P1A2 415 aa16.08■□□□□ 0.16
DDX56-207ENST00000448192 ZNF629Q9UEG4 869 aaPredicted RBP16.08■□□□□ 0.16
DDX56-207ENST00000448192 RPH3AQ9Y2J0 694 aaPredicted RBP16.08■□□□□ 0.16
DDX56-207ENST00000448192 L3MBTL1Q9Y468 752 aa16.08■□□□□ 0.16
DDX56-207ENST00000448192 PIP5K1BO14986 540 aa16.07■□□□□ 0.16
DDX56-207ENST00000448192 CREB1P16220 341 aa16.07■□□□□ 0.16
DDX56-207ENST00000448192 DPP4P27487 766 aa16.07■□□□□ 0.16
DDX56-207ENST00000448192 GABRA3P34903 492 aa16.07■□□□□ 0.16
DDX56-207ENST00000448192 STARP49675 285 aa16.07■□□□□ 0.16
DDX56-207ENST00000448192 ASCL1P50553 236 aa16.07■□□□□ 0.16
DDX56-207ENST00000448192 AGFG1P52594 562 aaKnown RBP16.07■□□□□ 0.16
DDX56-207ENST00000448192 ZNF136P52737 540 aa16.07■□□□□ 0.16
DDX56-207ENST00000448192 DGKQP52824 942 aa16.07■□□□□ 0.16
DDX56-207ENST00000448192 PRKAG1P54619 331 aa16.07■□□□□ 0.16
DDX56-207ENST00000448192 MANFP55145 182 aaKnown RBP16.07■□□□□ 0.16
DDX56-207ENST00000448192 GFRA1P56159 465 aa16.07■□□□□ 0.16
DDX56-207ENST00000448192 STX5Q13190 355 aa16.07■□□□□ 0.16
DDX56-207ENST00000448192 UGT3A2Q3SY77 523 aa16.07■□□□□ 0.16
DDX56-207ENST00000448192 ZNF385BQ569K4 471 aa16.07■□□□□ 0.16
DDX56-207ENST00000448192 WDR93Q6P2C0 686 aa16.07■□□□□ 0.16
DDX56-207ENST00000448192 AAGABQ6PD74 315 aa16.07■□□□□ 0.16
DDX56-207ENST00000448192 SZRD1Q7Z422 152 aa16.07■□□□□ 0.16
DDX56-207ENST00000448192 CDH24Q86UP0 819 aa16.07■□□□□ 0.16
DDX56-207ENST00000448192 ZFP28Q8NHY6 868 aa16.07■□□□□ 0.16
DDX56-207ENST00000448192 RNF138Q8WVD3 245 aa16.07■□□□□ 0.16
DDX56-207ENST00000448192 CAVIN3Q969G5 261 aa16.07■□□□□ 0.16
DDX56-207ENST00000448192 LRRC46Q96FV0 321 aa16.07■□□□□ 0.16
DDX56-207ENST00000448192 SFXN2Q96NB2 322 aa16.07■□□□□ 0.16
DDX56-207ENST00000448192 LMF2Q9BU23 707 aaKnown RBP16.07■□□□□ 0.16
DDX56-207ENST00000448192 DSN1Q9H410 356 aa16.07■□□□□ 0.16
DDX56-207ENST00000448192 C3orf14Q9HBI5 128 aa16.07■□□□□ 0.16
DDX56-207ENST00000448192 GIMAP2Q9UG22 337 aa16.07■□□□□ 0.16
DDX56-207ENST00000448192 MRTO4Q9UKD2 239 aaKnown RBP16.07■□□□□ 0.16
DDX56-207ENST00000448192 TMED5Q9Y3A6 229 aa16.07■□□□□ 0.16
DDX56-207ENST00000448192 PCNX3Q9H6A9 2034 aa16.06■□□□□ 0.16
DDX56-207ENST00000448192 MBD3L4A6NDZ8 208 aaPredicted RBP16.06■□□□□ 0.16
DDX56-207ENST00000448192 MBD3L3A6NE82 208 aaPredicted RBP16.06■□□□□ 0.16
DDX56-207ENST00000448192 MBD3L5A6NJ08 208 aaPredicted RBP16.06■□□□□ 0.16
DDX56-207ENST00000448192 SYT5O00445 386 aa16.06■□□□□ 0.16
DDX56-207ENST00000448192 FADS1O60427 444 aa16.06■□□□□ 0.16
DDX56-207ENST00000448192 ZWINTO95229 277 aa16.06■□□□□ 0.16
DDX56-207ENST00000448192 IL33O95760 270 aa16.06■□□□□ 0.16
DDX56-207ENST00000448192 PRPS2P11908 318 aa16.06■□□□□ 0.16
DDX56-207ENST00000448192 BCKDHAP12694 445 aa16.06■□□□□ 0.16
DDX56-207ENST00000448192 ASMTP46597 345 aa16.06■□□□□ 0.16
DDX56-207ENST00000448192 CLK3P49761 638 aaKnown RBP16.06■□□□□ 0.16
DDX56-207ENST00000448192 PSMD4P55036 377 aaKnown RBP16.06■□□□□ 0.16
DDX56-207ENST00000448192 POMZP3Q6PJE2 187 aa16.06■□□□□ 0.16
DDX56-207ENST00000448192 HOMEZQ8IX15 550 aa16.06■□□□□ 0.16
DDX56-207ENST00000448192 ZZZ3Q8IYH5 903 aa16.06■□□□□ 0.16
DDX56-207ENST00000448192 C9orf106Q8NAJ2 232 aa16.06■□□□□ 0.16
DDX56-207ENST00000448192 MBD3L2Q8NHZ7 208 aaPredicted RBP16.06■□□□□ 0.16
DDX56-207ENST00000448192 GPR151Q8TDV0 419 aa16.06■□□□□ 0.16
DDX56-207ENST00000448192 PIK3R3Q92569 461 aa16.06■□□□□ 0.16
DDX56-207ENST00000448192 ZBED6CLQ96FA7 236 aaPredicted RBP16.06■□□□□ 0.16
DDX56-207ENST00000448192 ZNF764Q96H86 408 aaPredicted RBP16.06■□□□□ 0.16
DDX56-207ENST00000448192 SDHAF3Q9NRP4 125 aa16.06■□□□□ 0.16
DDX56-207ENST00000448192 ABCG2Q9UNQ0 655 aa16.06■□□□□ 0.16
DDX56-207ENST00000448192 MRPS18CQ9Y3D5 142 aaKnown RBP16.06■□□□□ 0.16
DDX56-207ENST00000448192 GXYLT2A0PJZ3 443 aa16.05■□□□□ 0.16
DDX56-207ENST00000448192 B4DXG7 233 aa16.05■□□□□ 0.16
DDX56-207ENST00000448192 ZIC3O60481 467 aa16.05■□□□□ 0.16
DDX56-207ENST00000448192 TBX19O60806 448 aa16.05■□□□□ 0.16
DDX56-207ENST00000448192 PEX11AO75192 247 aa16.05■□□□□ 0.16
DDX56-207ENST00000448192 KCNH1O95259 989 aa16.05■□□□□ 0.16
DDX56-207ENST00000448192 IFI6P09912 130 aa16.05■□□□□ 0.16
DDX56-207ENST00000448192 EFNA1P20827 205 aaPredicted RBP16.05■□□□□ 0.16
DDX56-207ENST00000448192 CTSSP25774 331 aa16.05■□□□□ 0.16
DDX56-207ENST00000448192 KIR2DL3P43628 341 aa16.05■□□□□ 0.16
DDX56-207ENST00000448192 LHX2P50458 406 aa16.05■□□□□ 0.16
DDX56-207ENST00000448192 DSCR4P56555 118 aaPredicted RBP16.05■□□□□ 0.16
DDX56-207ENST00000448192 PDE7AQ13946 482 aa16.05■□□□□ 0.16
DDX56-207ENST00000448192 PLXDC2Q6UX71 529 aa16.05■□□□□ 0.16
DDX56-207ENST00000448192 MARCH3Q86UD3 253 aa16.05■□□□□ 0.16
DDX56-207ENST00000448192 EXOC3L1Q86VI1 746 aa16.05■□□□□ 0.16
DDX56-207ENST00000448192 NUP43Q8NFH3 380 aa16.05■□□□□ 0.16
DDX56-207ENST00000448192 OR2M3Q8NG83 312 aa16.05■□□□□ 0.16
DDX56-207ENST00000448192 CEP70Q8NHQ1 597 aa16.05■□□□□ 0.16
DDX56-207ENST00000448192 SLC9A6Q92581 669 aa16.05■□□□□ 0.16
DDX56-207ENST00000448192 RNASE6Q93091 150 aaKnown RBP16.05■□□□□ 0.16
DDX56-207ENST00000448192 RMND5BQ96G75 393 aaPredicted RBP16.05■□□□□ 0.16
DDX56-207ENST00000448192 PPP3R2Q96LZ3 170 aa16.05■□□□□ 0.16
DDX56-207ENST00000448192 SH3GL2Q99962 352 aa16.05■□□□□ 0.16
DDX56-207ENST00000448192 FAM120CQ9NX05 1096 aaKnown RBP16.05■□□□□ 0.16
DDX56-207ENST00000448192 MED11Q9P086 117 aa16.05■□□□□ 0.16
DDX56-207ENST00000448192 TTC36A6NLP5 189 aa16.04■□□□□ 0.16
DDX56-207ENST00000448192 CLCA1A8K7I4 914 aa16.04■□□□□ 0.16
DDX56-207ENST00000448192 TMEM114B3SHH9 223 aa16.04■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms